RNA–Protein interactions for RNA: ENST00000579272.5

TRIM16-215, Transcript of tripartite motif containing 16, humanhuman

TSL 4

Gene TRIM16, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16-215ENST00000579272 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
TRIM16-215ENST00000579272 IGHMBP2P38935 993 aaKnown RBP11.95□□□□□ -0.5
TRIM16-215ENST00000579272 TTF1Q15361 905 aaPredicted RBP11.95□□□□□ -0.5
TRIM16-215ENST00000579272 SUSD4Q5VX71 490 aa11.95□□□□□ -0.5
TRIM16-215ENST00000579272 KBTBD3Q8NAB2 608 aa11.95□□□□□ -0.5
TRIM16-215ENST00000579272 LINC00116Q8NCU8 138 aa11.95□□□□□ -0.5
TRIM16-215ENST00000579272 SETDB2Q96T68 719 aa11.95□□□□□ -0.5
TRIM16-215ENST00000579272 RIPOR2Q9Y4F9 1068 aa11.95□□□□□ -0.5
TRIM16-215ENST00000579272 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 UBN2Q6ZU65 1347 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 PDE8BO95263 885 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 MAP4K4O95819 1239 aaPredicted RBP11.94□□□□□ -0.5
TRIM16-215ENST00000579272 IFIT1P09914 478 aaKnown RBP11.94□□□□□ -0.5
TRIM16-215ENST00000579272 PSMA5P28066 241 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 KCNJ4P48050 445 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 SLC4A3P48751 1232 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 RBM6P78332 1123 aaKnown RBP11.94□□□□□ -0.5
TRIM16-215ENST00000579272 KRT32Q14532 448 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 SLC10A5Q5PT55 438 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 TTC39AQ5SRH9 613 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 TPTE2Q6XPS3 522 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 KRT27Q7Z3Y8 459 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 DBNDD2Q9BQY9 259 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 HMG20BQ9P0W2 317 aa11.94□□□□□ -0.5
TRIM16-215ENST00000579272 NTSR2O95665 410 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 PDIA4P13667 645 aaKnown RBP11.93□□□□□ -0.5
TRIM16-215ENST00000579272 SSFA2P28290 1259 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 RFC4P35249 363 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 SF3B3Q15393 1217 aaKnown RBP11.93□□□□□ -0.5
TRIM16-215ENST00000579272 PUM3Q15397 648 aaKnown RBP11.93□□□□□ -0.5
TRIM16-215ENST00000579272 LRRC24Q50LG9 513 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 TRAPPC3LQ5T215 181 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 LPIN2Q92539 896 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.93□□□□□ -0.5
TRIM16-215ENST00000579272 GREM2Q9H772 168 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 PAG1Q9NWQ8 432 aa11.93□□□□□ -0.5
TRIM16-215ENST00000579272 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 DDX60Q8IY21 1712 aaKnown RBP11.92□□□□□ -0.5
TRIM16-215ENST00000579272 GNPATO15228 680 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 SLC5A1P13866 664 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 NEK4P51957 841 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 TIMM10P62072 90 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 MCMDC2Q4G0Z9 681 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 MAP4K1Q92918 833 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 CHMP4CQ96CF2 233 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 ZNF594Q96JF6 807 aaPredicted RBP11.92□□□□□ -0.5
TRIM16-215ENST00000579272 LSG1Q9H089 658 aaKnown RBP11.92□□□□□ -0.5
TRIM16-215ENST00000579272 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
TRIM16-215ENST00000579272 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
TRIM16-215ENST00000579272 C4BP0C0L5 1744 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 IGSF3O75054 1194 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 NUCB2P80303 420 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
TRIM16-215ENST00000579272 UPF1Q92900 1129 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRIM16-215ENST00000579272 KCNB2Q92953 911 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 XAGE2Q96GT9 111 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 INTS4Q96HW7 963 aaKnown RBP11.91□□□□□ -0.5
TRIM16-215ENST00000579272 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 DNAJC2Q99543 621 aaKnown RBP11.91□□□□□ -0.5
TRIM16-215ENST00000579272 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
TRIM16-215ENST00000579272 ANKRD1Q15327 319 aa11.9□□□□□ -0.5
TRIM16-215ENST00000579272 TSGA10IPQ3SY00 556 aa11.9□□□□□ -0.5
TRIM16-215ENST00000579272 TMED8Q6PL24 325 aaPredicted RBP11.9□□□□□ -0.5
TRIM16-215ENST00000579272 ANKRD18AQ8IVF6 992 aa11.9□□□□□ -0.5
TRIM16-215ENST00000579272 ARAP2Q8WZ64 1704 aa11.9□□□□□ -0.5
TRIM16-215ENST00000579272 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
TRIM16-215ENST00000579272 SLKQ9H2G2 1235 aaPredicted RBP11.9□□□□□ -0.5
TRIM16-215ENST00000579272 GNL3LQ9NVN8 582 aaKnown RBP11.9□□□□□ -0.5
TRIM16-215ENST00000579272 LRP5O75197 1615 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 COL24A1Q17RW2 1714 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 GOLIM4O00461 696 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 RNF113AO15541 343 aaKnown RBP11.89□□□□□ -0.51
TRIM16-215ENST00000579272 HMGB1P09429 215 aaKnown RBP11.89□□□□□ -0.51
TRIM16-215ENST00000579272 HCLS1P14317 486 aaPredicted RBP11.89□□□□□ -0.51
TRIM16-215ENST00000579272 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
TRIM16-215ENST00000579272 FLAD1Q8NFF5 587 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 ZSCAN31Q96LW9 406 aaPredicted RBP11.89□□□□□ -0.51
TRIM16-215ENST00000579272 CTNNA3Q9UI47 895 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 CYP46A1Q9Y6A2 500 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 MYH7P12883 1935 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 MED23Q9ULK4 1368 aa11.89□□□□□ -0.51
TRIM16-215ENST00000579272 BRWD3Q6RI45 1802 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 RIC1Q4ADV7 1423 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 NPHP1O15259 732 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 VPS53Q5VIR6 699 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 USPL1Q5W0Q7 1092 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 VGLL2Q8N8G2 317 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 ARHGEF1Q92888 912 aaKnown RBP11.88□□□□□ -0.51
TRIM16-215ENST00000579272 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 DSCC1Q9BVC3 393 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 ANKRD2Q9GZV1 360 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 ALDH8A1Q9H2A2 487 aaPredicted RBP11.88□□□□□ -0.51
TRIM16-215ENST00000579272 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
TRIM16-215ENST00000579272 SNX14Q9Y5W7 946 aa11.88□□□□□ -0.51
TRIM16-215ENST00000579272 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.88□□□□□ -0.51
TRIM16-215ENST00000579272 CARMIL3Q8ND23 1372 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms