RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 FBXO22Q8NEZ5 403 aa14□□□□□ -0.17
TRAPPC8-204ENST00000578252 SUCLG2Q96I99 432 aa14□□□□□ -0.17
TRAPPC8-204ENST00000578252 MFRPQ9BY79 579 aa14□□□□□ -0.17
TRAPPC8-204ENST00000578252 KIF13BQ9NQT8 1826 aa13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 ABCC12Q96J65 1359 aa13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 RTL5Q5HYW3 569 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 MICALL2Q8IY33 904 aa13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 SPON1Q9HCB6 807 aa13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 LRRFIP2Q9Y608 721 aaKnown RBP13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 ANKRD31Q8N7Z5 1873 aa13.99□□□□□ -0.17
TRAPPC8-204ENST00000578252 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 TNRC6CQ9HCJ0 1690 aaKnown RBP13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 CTSWP56202 376 aa13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 RPAP2Q8IXW5 612 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 NLRP3Q96P20 1036 aa13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 BRIP1Q9BX63 1249 aa13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 PDZRN3Q9UPQ7 1066 aa13.98□□□□□ -0.17
TRAPPC8-204ENST00000578252 SNPHO15079 494 aa13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 HCLS1P14317 486 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 PDE6BP35913 854 aa13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 FOXO4P98177 505 aa13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 MTX1Q13505 466 aa13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 JARID2Q92833 1246 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 BICC1Q9H694 974 aaKnown RBP13.97□□□□□ -0.17
TRAPPC8-204ENST00000578252 RTL9Q8NET4 1388 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 ST18O60284 1047 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 CSF1RP07333 972 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 CCDC152Q4G0S7 254 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 SYNE4Q8N205 404 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 ANKRD44Q8N8A2 993 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 KAZALD1Q96I82 304 aa13.96□□□□□ -0.17
TRAPPC8-204ENST00000578252 KLRG2A4D1S0 409 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 HMMRO75330 724 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 PTGER2P43116 358 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 CEP85Q6P2H3 762 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 LMBR1LQ6UX01 489 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 TTLL11Q8NHH1 800 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 C1orf115Q9H7X2 142 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 DLEC1Q9Y238 1755 aa13.95□□□□□ -0.18
TRAPPC8-204ENST00000578252 ATP8B2P98198 1209 aa13.94□□□□□ -0.18
TRAPPC8-204ENST00000578252 CRY2Q49AN0 593 aa13.94□□□□□ -0.18
TRAPPC8-204ENST00000578252 EPHA10Q5JZY3 1008 aa13.94□□□□□ -0.18
TRAPPC8-204ENST00000578252 COL11A2P13942 1736 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 SRGAP3O43295 1099 aa13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 IFIT5Q13325 482 aaKnown RBP13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 CCDC57Q2TAC2 916 aa13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 CCDC24Q8N4L8 307 aa13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 CHMP3Q9Y3E7 222 aa13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 LRP5O75197 1615 aa13.93□□□□□ -0.18
TRAPPC8-204ENST00000578252 ANKRD18BA2A2Z9 1011 aa13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 HS6ST3Q8IZP7 471 aa13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 SSH3Q8TE77 659 aa13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 CDC5LQ99459 802 aaKnown RBP13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 CD2APQ9Y5K6 639 aa13.92□□□□□ -0.18
TRAPPC8-204ENST00000578252 KIAA1551Q9HCM1 1747 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 H0YIN7 160 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 NPR1P16066 1061 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 ITGA6P23229 1130 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 HOXA10P31260 410 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 TGFB2P61812 414 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 RBM17Q96I25 401 aaKnown RBP13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 RWDD1Q9H446 243 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 GREM2Q9H772 168 aa13.91□□□□□ -0.18
TRAPPC8-204ENST00000578252 PNMA6EA0A0J9YXQ4 647 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 SRGNP10124 158 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 ALDH1B1P30837 517 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 TAF7LQ5H9L4 462 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 STYK1Q6J9G0 422 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 C2CD5Q86YS7 1000 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 MASTLQ96GX5 879 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 CRAMP1Q96RY5 1269 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 PPP4R2Q9NY27 417 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
TRAPPC8-204ENST00000578252 IGHMBP2P38935 993 aaKnown RBP13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 HSP90AB4PQ58FF6 505 aa13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 TMC4Q7Z404 712 aa13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 CCDC85AQ96PX6 553 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 COPRSQ9NQ92 184 aa13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 PPP1R1BQ9UD71 204 aaPredicted RBP13.89□□□□□ -0.19
TRAPPC8-204ENST00000578252 RFX5P48382 616 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC8-204ENST00000578252 GRAPQ13588 217 aa13.88□□□□□ -0.19
TRAPPC8-204ENST00000578252 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
TRAPPC8-204ENST00000578252 GRAPLQ8TC17 118 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC8-204ENST00000578252 CNKSR1Q969H4 720 aa13.88□□□□□ -0.19
TRAPPC8-204ENST00000578252 CACNA1SQ13698 1873 aa13.88□□□□□ -0.19
TRAPPC8-204ENST00000578252 BRCA1P38398 1863 aaKnown RBP13.87□□□□□ -0.19
TRAPPC8-204ENST00000578252 BBOX1O75936 387 aa13.87□□□□□ -0.19
TRAPPC8-204ENST00000578252 CIAO1O76071 339 aa13.87□□□□□ -0.19
TRAPPC8-204ENST00000578252 RPS8P62241 208 aaKnown RBP13.87□□□□□ -0.19
TRAPPC8-204ENST00000578252 PTPN12Q05209 780 aaKnown RBP13.87□□□□□ -0.19
TRAPPC8-204ENST00000578252 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
TRAPPC8-204ENST00000578252 MPHOSPH8Q99549 860 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms