RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 EYA2O00167 538 aa9.9□□□□□ -0.82
SKA2-203ENST00000578105 HSP90B1P14625 803 aaKnown RBP9.9□□□□□ -0.82
SKA2-203ENST00000578105 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
SKA2-203ENST00000578105 EPHA10Q5JZY3 1008 aa9.9□□□□□ -0.82
SKA2-203ENST00000578105 USPL1Q5W0Q7 1092 aa9.9□□□□□ -0.82
SKA2-203ENST00000578105 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
SKA2-203ENST00000578105 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
SKA2-203ENST00000578105 STRN4Q9NRL3 753 aa9.9□□□□□ -0.82
SKA2-203ENST00000578105 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.83
SKA2-203ENST00000578105 ITGB4P16144 1822 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 SH3TC1Q8TE82 1336 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 ERVV-1B6SEH8 477 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 EXOC5O00471 708 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 RGL2O15211 777 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 HMGB1P09429 215 aaKnown RBP9.89□□□□□ -0.83
SKA2-203ENST00000578105 RUFY3Q7L099 469 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 ZBTB38Q8NAP3 1195 aaPredicted RBP9.89□□□□□ -0.83
SKA2-203ENST00000578105 SYAP1Q96A49 352 aaPredicted RBP9.89□□□□□ -0.83
SKA2-203ENST00000578105 CCDC8Q9H0W5 538 aaPredicted RBP9.89□□□□□ -0.83
SKA2-203ENST00000578105 HELLSQ9NRZ9 838 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 BTG4Q9NY30 223 aa9.89□□□□□ -0.83
SKA2-203ENST00000578105 DDX49Q9Y6V7 483 aaKnown RBP9.89□□□□□ -0.83
SKA2-203ENST00000578105 COL16A1Q07092 1604 aaPredicted RBP9.89□□□□□ -0.83
SKA2-203ENST00000578105 RPAP1Q9BWH6 1393 aaPredicted RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 ANKRD36CQ5JPF3 1778 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 MAP3K15Q6ZN16 1313 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 NWD2Q9ULI1 1742 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 ATP5J2-PTCD1G3V325 749 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 PTCD1O75127 700 aaKnown RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 MAP4K4O95819 1239 aaPredicted RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 ZFYP08048 801 aaPredicted RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 NCLP19338 710 aaKnown RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 IL6STP40189 918 aaPredicted RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 KCNJ4P48050 445 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 ZNF445P59923 1031 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 TFCP2Q12800 502 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 NMIQ13287 307 aaPredicted RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 CREB3L3Q68CJ9 461 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 GPR153Q6NV75 609 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 GIGYF2Q6Y7W6 1299 aaKnown RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 TTLL7Q6ZT98 887 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 ZGPATQ8N5A5 531 aaKnown RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 KBTBD3Q8NAB2 608 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 SIL1Q9H173 461 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 PDRG1Q9NUG6 133 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 DBNLQ9UJU6 430 aaKnown RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 RBM8AQ9Y5S9 174 aaKnown RBP9.88□□□□□ -0.83
SKA2-203ENST00000578105 ZNF609O15014 1411 aa9.88□□□□□ -0.83
SKA2-203ENST00000578105 A1BGP04217 495 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 CSF1RP07333 972 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 CASTP20810 708 aaKnown RBP9.87□□□□□ -0.83
SKA2-203ENST00000578105 PDCP20941 246 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 AK2P54819 239 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 CCDC57Q2TAC2 916 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 MCMDC2Q4G0Z9 681 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 Q6ZNB5 142 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 TMEM87AQ8NBN3 555 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 PIGBQ92521 554 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 FAM212AQ96EL1 285 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 ZNF512BQ96KM6 892 aaPredicted RBP9.87□□□□□ -0.83
SKA2-203ENST00000578105 DSCC1Q9BVC3 393 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 IL25Q9H293 177 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 LMBRD1Q9NUN5 540 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 CEP126Q9P2H0 1117 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 ZNF831Q5JPB2 1677 aa9.87□□□□□ -0.83
SKA2-203ENST00000578105 SLC27A2O14975 620 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 PHF14O94880 888 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 CCDC158Q5M9N0 1113 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 MCTP1Q6DN14 999 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 PRPF40BQ6NWY9 871 aaKnown RBP9.86□□□□□ -0.83
SKA2-203ENST00000578105 BLOC1S2Q6QNY1 142 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 ATG9AQ7Z3C6 839 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 NRAPQ86VF7 1730 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 ANP32BQ92688 251 aaKnown RBP9.86□□□□□ -0.83
SKA2-203ENST00000578105 JAKMIP1Q96N16 626 aaKnown RBP9.86□□□□□ -0.83
SKA2-203ENST00000578105 UPF3BQ9BZI7 483 aaKnown RBP9.86□□□□□ -0.83
SKA2-203ENST00000578105 GRPEL1Q9HAV7 217 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 SMC3Q9UQE7 1217 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 ZDHHC9Q9Y397 364 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
SKA2-203ENST00000578105 TAF5LO75529 589 aa9.85□□□□□ -0.83
SKA2-203ENST00000578105 LETM1O95202 739 aaPredicted RBP9.85□□□□□ -0.83
SKA2-203ENST00000578105 CYP19A1P11511 503 aaPredicted RBP9.85□□□□□ -0.83
SKA2-203ENST00000578105 PTH1RQ03431 593 aa9.85□□□□□ -0.83
SKA2-203ENST00000578105 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
SKA2-203ENST00000578105 ILDR1Q86SU0 546 aaPredicted RBP9.85□□□□□ -0.83
SKA2-203ENST00000578105 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
SKA2-203ENST00000578105 TLR7Q9NYK1 1049 aaKnown RBP9.85□□□□□ -0.83
SKA2-203ENST00000578105 RREB1Q92766 1687 aa9.85□□□□□ -0.83
SKA2-203ENST00000578105 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
SKA2-203ENST00000578105 A0A0D9SFI3 127 aa9.84□□□□□ -0.83
SKA2-203ENST00000578105 ZSCAN22P10073 491 aaPredicted RBP9.84□□□□□ -0.83
SKA2-203ENST00000578105 XRCC6P12956 609 aaKnown RBP eCLIP9.84□□□□□ -0.83
SKA2-203ENST00000578105 RPS6KB1P23443 525 aa9.84□□□□□ -0.83
SKA2-203ENST00000578105 IFIT5Q13325 482 aaKnown RBP9.84□□□□□ -0.83
SKA2-203ENST00000578105 ZSCAN25Q6NSZ9 544 aa9.84□□□□□ -0.83
SKA2-203ENST00000578105 DNAJC10Q8IXB1 793 aa9.84□□□□□ -0.83
SKA2-203ENST00000578105 FAM43AQ8N2R8 423 aa9.84□□□□□ -0.83
SKA2-203ENST00000578105 RGS22Q8NE09 1264 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms