RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 SMG9Q9H0W8 520 aaKnown RBP11.39□□□□□ -0.59
SNRPD1-202ENST00000577906 J3QW42 95 aa11.38□□□□□ -0.59
SNRPD1-202ENST00000577906 HYAL2Q12891 473 aa11.38□□□□□ -0.59
SNRPD1-202ENST00000577906 ZNF211Q13398 564 aaPredicted RBP11.38□□□□□ -0.59
SNRPD1-202ENST00000577906 XKR5Q6UX68 686 aa11.38□□□□□ -0.59
SNRPD1-202ENST00000577906 ANO2Q9NQ90 1003 aa11.38□□□□□ -0.59
SNRPD1-202ENST00000577906 MSTNO14793 375 aa11.37□□□□□ -0.59
SNRPD1-202ENST00000577906 USP5P45974 858 aa11.37□□□□□ -0.59
SNRPD1-202ENST00000577906 C8orf34Q49A92 452 aa11.37□□□□□ -0.59
SNRPD1-202ENST00000577906 PLD4Q96BZ4 506 aa11.37□□□□□ -0.59
SNRPD1-202ENST00000577906 ICMTO60725 284 aa11.36□□□□□ -0.59
SNRPD1-202ENST00000577906 RAC1P63000 192 aa11.36□□□□□ -0.59
SNRPD1-202ENST00000577906 SPACA7Q96KW9 195 aa11.36□□□□□ -0.59
SNRPD1-202ENST00000577906 GGNBP2Q9H3C7 697 aa11.36□□□□□ -0.59
SNRPD1-202ENST00000577906 POLIQ9UNA4 740 aa11.36□□□□□ -0.59
SNRPD1-202ENST00000577906 APBA3O96018 575 aa11.35□□□□□ -0.59
SNRPD1-202ENST00000577906 ITGB2P05107 769 aa11.35□□□□□ -0.59
SNRPD1-202ENST00000577906 GRIK5Q16478 980 aa11.35□□□□□ -0.59
SNRPD1-202ENST00000577906 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
SNRPD1-202ENST00000577906 A0A0A0MRY4 1105 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 C1QTNF9BB2RNN3 333 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 SERPINB4P48594 390 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 EHHADHQ08426 723 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 WFDC8Q8IUA0 241 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 DMRTC2Q8IXT2 367 aaPredicted RBP11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 NACC1Q96RE7 527 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 TMEM63CQ9P1W3 806 aa11.34□□□□□ -0.59
SNRPD1-202ENST00000577906 FAM229AH3BQW9 127 aa11.33□□□□□ -0.6
SNRPD1-202ENST00000577906 CD163Q86VB7 1156 aa11.33□□□□□ -0.6
SNRPD1-202ENST00000577906 TXNDC2Q86VQ3 553 aa11.33□□□□□ -0.6
SNRPD1-202ENST00000577906 GLYCTKQ8IVS8 523 aa11.33□□□□□ -0.6
SNRPD1-202ENST00000577906 CCER1Q8TC90 406 aaPredicted RBP11.33□□□□□ -0.6
SNRPD1-202ENST00000577906 SPOCK3Q9BQ16 436 aa11.33□□□□□ -0.6
SNRPD1-202ENST00000577906 H3BRB1 525 aa11.32□□□□□ -0.6
SNRPD1-202ENST00000577906 FZD6O60353 706 aa11.32□□□□□ -0.6
SNRPD1-202ENST00000577906 CACTIN-AS1Q8N1I8 211 aa11.32□□□□□ -0.6
SNRPD1-202ENST00000577906 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
SNRPD1-202ENST00000577906 PMEPA1Q969W9 287 aa11.32□□□□□ -0.6
SNRPD1-202ENST00000577906 TUT1Q9H6E5 874 aaKnown RBP11.32□□□□□ -0.6
SNRPD1-202ENST00000577906 KIF4AO95239 1232 aa11.31□□□□□ -0.6
SNRPD1-202ENST00000577906 ELNP15502 786 aa11.31□□□□□ -0.6
SNRPD1-202ENST00000577906 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
SNRPD1-202ENST00000577906 ILDR2Q71H61 639 aa11.31□□□□□ -0.6
SNRPD1-202ENST00000577906 LOC100996750A0A140TA64 210 aa11.3□□□□□ -0.6
SNRPD1-202ENST00000577906 CYP2E1P05181 493 aaPredicted RBP11.3□□□□□ -0.6
SNRPD1-202ENST00000577906 CHRNA4P43681 627 aa11.3□□□□□ -0.6
SNRPD1-202ENST00000577906 NCAPG2Q86XI2 1143 aa11.3□□□□□ -0.6
SNRPD1-202ENST00000577906 KRTAP4-6Q9BYQ5 205 aa11.3□□□□□ -0.6
SNRPD1-202ENST00000577906 CNTN3Q9P232 1028 aa11.3□□□□□ -0.6
SNRPD1-202ENST00000577906 A6NHS1 94 aa11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 BRD1O95696 1058 aa11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 PROCP04070 461 aa11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 CES1P23141 567 aa11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 CCDC87Q9NVE4 849 aa11.29□□□□□ -0.6
SNRPD1-202ENST00000577906 SMNDC1O75940 238 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNRPD1-202ENST00000577906 GRIK4Q16099 956 aa11.28□□□□□ -0.6
SNRPD1-202ENST00000577906 C1orf127Q8N9H9 656 aa11.28□□□□□ -0.6
SNRPD1-202ENST00000577906 C9orf172C9J069 976 aa11.27□□□□□ -0.61
SNRPD1-202ENST00000577906 GJD3Q8N144 294 aa11.27□□□□□ -0.61
SNRPD1-202ENST00000577906 IL22RA1Q8N6P7 574 aa11.27□□□□□ -0.61
SNRPD1-202ENST00000577906 CEP120Q8N960 986 aa11.27□□□□□ -0.61
SNRPD1-202ENST00000577906 BRPF3Q9ULD4 1205 aa11.27□□□□□ -0.61
SNRPD1-202ENST00000577906 CEP135Q66GS9 1140 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 SNX29Q8TEQ0 813 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 MUC3BQ9H195 1237 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 KANSL3Q9P2N6 904 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 SALL4Q9UJQ4 1053 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 TRIM33Q9UPN9 1127 aa11.26□□□□□ -0.61
SNRPD1-202ENST00000577906 PHACTR2O75167 634 aa11.25□□□□□ -0.61
SNRPD1-202ENST00000577906 TNFRSF21O75509 655 aa11.25□□□□□ -0.61
SNRPD1-202ENST00000577906 GATA4P43694 442 aa11.25□□□□□ -0.61
SNRPD1-202ENST00000577906 ATP11AP98196 1134 aa11.25□□□□□ -0.61
SNRPD1-202ENST00000577906 ECM1Q16610 540 aa11.25□□□□□ -0.61
SNRPD1-202ENST00000577906 PBX4Q9BYU1 374 aa11.25□□□□□ -0.61
SNRPD1-202ENST00000577906 NDUFB5O43674 189 aa11.24□□□□□ -0.61
SNRPD1-202ENST00000577906 BAG6P46379 1132 aa11.24□□□□□ -0.61
SNRPD1-202ENST00000577906 NRG1Q02297 640 aaPredicted RBP11.24□□□□□ -0.61
SNRPD1-202ENST00000577906 RASSF4Q9H2L5 321 aa11.24□□□□□ -0.61
SNRPD1-202ENST00000577906 SRA1Q9HD15 236 aaKnown RBP11.24□□□□□ -0.61
SNRPD1-202ENST00000577906 GNEQ9Y223 722 aaKnown RBP11.24□□□□□ -0.61
SNRPD1-202ENST00000577906 ARHGAP4P98171 946 aa11.23□□□□□ -0.61
SNRPD1-202ENST00000577906 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
SNRPD1-202ENST00000577906 DCAF11Q8TEB1 546 aa11.23□□□□□ -0.61
SNRPD1-202ENST00000577906 LENG1Q96BZ8 264 aaPredicted RBP11.23□□□□□ -0.61
SNRPD1-202ENST00000577906 CHRDQ9H2X0 955 aa11.23□□□□□ -0.61
SNRPD1-202ENST00000577906 FAM177BA6PVY3 158 aa11.22□□□□□ -0.61
SNRPD1-202ENST00000577906 SELPP16109 830 aa11.22□□□□□ -0.61
SNRPD1-202ENST00000577906 CITED4Q96RK1 184 aa11.22□□□□□ -0.61
SNRPD1-202ENST00000577906 PPME1Q9Y570 386 aa11.22□□□□□ -0.61
SNRPD1-202ENST00000577906 CDC27P30260 824 aa11.21□□□□□ -0.61
SNRPD1-202ENST00000577906 PDE3BQ13370 1112 aa11.21□□□□□ -0.61
SNRPD1-202ENST00000577906 LACRTQ9GZZ8 138 aa11.21□□□□□ -0.61
SNRPD1-202ENST00000577906 FOXD3Q9UJU5 478 aaPredicted RBP11.21□□□□□ -0.61
SNRPD1-202ENST00000577906 NEFLP07196 543 aa11.2□□□□□ -0.62
SNRPD1-202ENST00000577906 EDN3P14138 238 aa11.2□□□□□ -0.62
SNRPD1-202ENST00000577906 PTPRAP18433 802 aa11.2□□□□□ -0.62
SNRPD1-202ENST00000577906 SOWAHDA6NJG2 315 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms