RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
PPP4R1-206ENST00000577779 THUMPD2Q9BTF0 503 aaKnown RBP18.68■□□□□ 0.58
PPP4R1-206ENST00000577779 TRMT112Q9UI30 125 aaKnown RBP18.68■□□□□ 0.58
PPP4R1-206ENST00000577779 FKTNO75072 461 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 TM4SF4P48230 202 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 SCARF1Q14162 830 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 MOB2Q70IA6 237 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 NLRP10Q86W26 655 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 EYA3Q99504 573 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 POLLQ9UGP5 575 aa18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 KIAA0100Q14667 2235 aaKnown RBP18.67■□□□□ 0.58
PPP4R1-206ENST00000577779 TRIOBPQ9H2D6 2365 aa18.66■□□□□ 0.58
PPP4R1-206ENST00000577779 UBE2Q2LH0YL09 131 aa18.66■□□□□ 0.58
PPP4R1-206ENST00000577779 VIL1P09327 827 aaKnown RBP18.66■□□□□ 0.58
PPP4R1-206ENST00000577779 SH3TC1Q8TE82 1336 aa18.66■□□□□ 0.58
PPP4R1-206ENST00000577779 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
PPP4R1-206ENST00000577779 SCN9AQ15858 1988 aa18.65■□□□□ 0.58
PPP4R1-206ENST00000577779 GPSM2P81274 684 aa18.65■□□□□ 0.58
PPP4R1-206ENST00000577779 HSP90AB3PQ58FF7 597 aa18.65■□□□□ 0.58
PPP4R1-206ENST00000577779 POTEFA5A3E0 1075 aa18.64■□□□□ 0.57
PPP4R1-206ENST00000577779 MKRN3Q13064 507 aaKnown RBP18.64■□□□□ 0.57
PPP4R1-206ENST00000577779 INTS3Q68E01 1043 aaKnown RBP18.64■□□□□ 0.57
PPP4R1-206ENST00000577779 LRP10Q7Z4F1 713 aa18.64■□□□□ 0.57
PPP4R1-206ENST00000577779 RANBP2P49792 3224 aaKnown RBP18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 CUL9Q8IWT3 2517 aa18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 ZNF280AP59817 542 aaPredicted RBP18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 SREBF2Q12772 1141 aa18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 TTLL12Q14166 644 aaPredicted RBP18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 PDIA6Q15084 440 aa18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 CELF1Q92879 486 aaKnown RBP18.63■□□□□ 0.57
PPP4R1-206ENST00000577779 DLG5Q8TDM6 1919 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 G3V3G9 751 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 ANXA1P04083 346 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 EIF2S2P20042 333 aaKnown RBP18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 PROSER3Q2NL68 480 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 DCAF8Q5TAQ9 597 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 TBC1D16Q8TBP0 767 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 CFHR5Q9BXR6 569 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 ZC3H12CQ9C0D7 883 aaKnown RBP18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 R3HDMLQ9H3Y0 253 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 PITPNM2Q9BZ72 1349 aa18.62■□□□□ 0.57
PPP4R1-206ENST00000577779 AGBL3Q8NEM8 1001 aa18.61■□□□□ 0.57
PPP4R1-206ENST00000577779 ZNF428Q96B54 188 aa18.61■□□□□ 0.57
PPP4R1-206ENST00000577779 SCAF8Q9UPN6 1271 aaKnown RBP18.61■□□□□ 0.57
PPP4R1-206ENST00000577779 NEFMP07197 916 aa18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 AIMP1Q12904 312 aaKnown RBP18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 TCIRG1Q13488 830 aa18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 PRAMEF18Q5VWM3 479 aa18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 RSBN1LQ6PCB5 846 aaPredicted RBP18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 MYOZ2Q9NPC6 264 aa18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 TRIM17Q9Y577 477 aa18.6■□□□□ 0.57
PPP4R1-206ENST00000577779 COPS6Q7L5N1 327 aa18.59■□□□□ 0.57
PPP4R1-206ENST00000577779 RBBP6Q7Z6E9 1792 aaKnown RBP18.59■□□□□ 0.57
PPP4R1-206ENST00000577779 ZNF609O15014 1411 aa18.58■□□□□ 0.57
PPP4R1-206ENST00000577779 USP17L8P0C7I0 530 aa18.58■□□□□ 0.56
PPP4R1-206ENST00000577779 OTOP1Q7RTM1 612 aa18.58■□□□□ 0.56
PPP4R1-206ENST00000577779 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
PPP4R1-206ENST00000577779 COLQQ9Y215 455 aaPredicted RBP18.58■□□□□ 0.56
PPP4R1-206ENST00000577779 COL4A1P02462 1669 aa18.57■□□□□ 0.56
PPP4R1-206ENST00000577779 ALDH1A1P00352 501 aa18.57■□□□□ 0.56
PPP4R1-206ENST00000577779 NF2P35240 595 aa18.57■□□□□ 0.56
PPP4R1-206ENST00000577779 SF3B3Q15393 1217 aaKnown RBP18.57■□□□□ 0.56
PPP4R1-206ENST00000577779 NECTIN2Q92692 538 aa18.57■□□□□ 0.56
PPP4R1-206ENST00000577779 UFL1O94874 794 aa18.56■□□□□ 0.56
PPP4R1-206ENST00000577779 EN2P19622 333 aaPredicted RBP18.56■□□□□ 0.56
PPP4R1-206ENST00000577779 PCGF6Q9BYE7 350 aa18.56■□□□□ 0.56
PPP4R1-206ENST00000577779 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
PPP4R1-206ENST00000577779 COL6A3P12111 3177 aa18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 RPS8P62241 208 aaKnown RBP18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 PTPN12Q05209 780 aaKnown RBP18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 FAM89AQ96GI7 184 aa18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 GMLQ99445 158 aa18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 PODXL2Q9NZ53 605 aa18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 ANKIB1Q9P2G1 1089 aa18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 PSME4Q14997 1843 aa18.55■□□□□ 0.56
PPP4R1-206ENST00000577779 PPP2R1AP30153 589 aa18.54■□□□□ 0.56
PPP4R1-206ENST00000577779 NBPF9Q3BBW0 867 aa18.54■□□□□ 0.56
PPP4R1-206ENST00000577779 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
PPP4R1-206ENST00000577779 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
PPP4R1-206ENST00000577779 NFE2L2Q16236 605 aa18.53■□□□□ 0.56
PPP4R1-206ENST00000577779 SPRYD7Q5W111 196 aa18.53■□□□□ 0.56
PPP4R1-206ENST00000577779 ARMC9Q7Z3E5 817 aa18.53■□□□□ 0.56
PPP4R1-206ENST00000577779 PTPN22Q9Y2R2 807 aa18.53■□□□□ 0.56
PPP4R1-206ENST00000577779 PRKG1Q13976 671 aa18.52■□□□□ 0.56
PPP4R1-206ENST00000577779 ARMC5Q96C12 935 aa18.52■□□□□ 0.56
PPP4R1-206ENST00000577779 USP17L3A6NCW0 530 aa18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 USP17L4A6NCW7 530 aa18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 DLL1O00548 723 aa18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 RTL5Q5HYW3 569 aaPredicted RBP18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 USP17L1Q7RTZ2 530 aa18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 IFNL1Q8IU54 200 aa18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 ERO1AQ96HE7 468 aa18.51■□□□□ 0.55
PPP4R1-206ENST00000577779 MANSC4A6NHS7 340 aaPredicted RBP18.5■□□□□ 0.55
PPP4R1-206ENST00000577779 INHBEP58166 350 aa18.5■□□□□ 0.55
PPP4R1-206ENST00000577779 TMEM106CQ9BVX2 250 aa18.5■□□□□ 0.55
PPP4R1-206ENST00000577779 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
PPP4R1-206ENST00000577779 IRS4O14654 1257 aaPredicted RBP18.49■□□□□ 0.55
PPP4R1-206ENST00000577779 LDLRAD1Q5T700 205 aa18.49■□□□□ 0.55
PPP4R1-206ENST00000577779 OGFOD1Q8N543 542 aa18.49■□□□□ 0.55
PPP4R1-206ENST00000577779 CD99L2Q8TCZ2 262 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms