RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 RIC1Q4ADV7 1423 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 NRXN2Q9P2S2 1712 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 DLG5Q8TDM6 1919 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 HRO43593 1189 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 TRIM28Q13263 835 aaKnown RBP9.06□□□□□ -0.96
CASC3-205ENST00000577605 TCIRG1Q13488 830 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 SLC10A5Q5PT55 438 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 FAM9BQ8IZU0 186 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
CASC3-205ENST00000577605 XAGE3Q8WTP9 111 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 ZNF622Q969S3 477 aaKnown RBP eCLIP9.06□□□□□ -0.965e-9■■□□□ 11.4
CASC3-205ENST00000577605 ZBED2Q9BTP6 218 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 UTP14AQ9BVJ6 771 aaKnown RBP9.06□□□□□ -0.96
CASC3-205ENST00000577605 STK31Q9BXU1 1019 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 ZBTB3Q9H5J0 574 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 LAMB4A4D0S4 1761 aa9.06□□□□□ -0.96
CASC3-205ENST00000577605 PPP1R3GB7ZBB8 358 aa9.05□□□□□ -0.96
CASC3-205ENST00000577605 COL9A1P20849 921 aa9.05□□□□□ -0.96
CASC3-205ENST00000577605 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
CASC3-205ENST00000577605 CC2D2BQ6DHV5 1058 aa9.05□□□□□ -0.96
CASC3-205ENST00000577605 NLRP3Q96P20 1036 aa9.05□□□□□ -0.96
CASC3-205ENST00000577605 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 HOXA10P31260 410 aaPredicted RBP9.04□□□□□ -0.96
CASC3-205ENST00000577605 KRT24Q2M2I5 525 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 PROSER3Q2NL68 480 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 TWISTNBQ3B726 338 aaPredicted RBP9.04□□□□□ -0.96
CASC3-205ENST00000577605 CRY2Q49AN0 593 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 RTKN2Q8IZC4 609 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 C8orf58Q8NAV2 365 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 SLC4A5Q9BY07 1137 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 TMX4Q9H1E5 349 aaPredicted RBP9.04□□□□□ -0.96
CASC3-205ENST00000577605 LTBP3Q9NS15 1303 aa9.04□□□□□ -0.96
CASC3-205ENST00000577605 MAP3K7O43318 606 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 NTSR2O95665 410 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 LMNB1P20700 586 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 C6orf132Q5T0Z8 1188 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 NLRP10Q86W26 655 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 KRI1Q8N9T8 703 aaKnown RBP9.03□□□□□ -0.96
CASC3-205ENST00000577605 RPGRQ92834 1020 aaKnown RBP9.03□□□□□ -0.96
CASC3-205ENST00000577605 RBM17Q96I25 401 aaKnown RBP9.03□□□□□ -0.96
CASC3-205ENST00000577605 CRAMP1Q96RY5 1269 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 SH3TC1Q8TE82 1336 aa9.03□□□□□ -0.96
CASC3-205ENST00000577605 ADCY9O60503 1353 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 BCORQ6W2J9 1755 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 FAM177BA6PVY3 158 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 ELL2O00472 640 aaPredicted RBP9.02□□□□□ -0.97
CASC3-205ENST00000577605 GPTP24298 496 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 NEXNQ0ZGT2 675 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
CASC3-205ENST00000577605 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 ERFEQ4G0M1 354 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 CCDC93Q567U6 631 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 PRPF40BQ6NWY9 871 aaKnown RBP9.02□□□□□ -0.97
CASC3-205ENST00000577605 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 ZNF428Q96B54 188 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 ISCA1Q9BUE6 129 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 VPS33BQ9H267 617 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 TRMT112Q9UI30 125 aaKnown RBP9.02□□□□□ -0.97
CASC3-205ENST00000577605 WWC3Q9ULE0 1092 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 UBN2Q6ZU65 1347 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 KDM2BQ8NHM5 1336 aa9.02□□□□□ -0.97
CASC3-205ENST00000577605 E9PSI1 815 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 C21orf2O43822 256 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 BBOX1O75936 387 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 ANXA1P04083 346 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 FLIIQ13045 1269 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 C9orf131Q5VYM1 1079 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 KSR2Q6VAB6 950 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 CCDC191Q8NCU4 936 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 TSR2Q969E8 191 aaKnown RBP9.01□□□□□ -0.97
CASC3-205ENST00000577605 KIAA1551Q9HCM1 1747 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 FANCIQ9NVI1 1328 aa9.01□□□□□ -0.97
CASC3-205ENST00000577605 TRIM66O15016 1216 aa9□□□□□ -0.97
CASC3-205ENST00000577605 VAMP4O75379 141 aa9□□□□□ -0.97
CASC3-205ENST00000577605 PDE4DQ08499 809 aa9□□□□□ -0.97
CASC3-205ENST00000577605 NUTM1Q86Y26 1132 aa9□□□□□ -0.97
CASC3-205ENST00000577605 CCDC24Q8N4L8 307 aa9□□□□□ -0.97
CASC3-205ENST00000577605 TSPYL6Q8N831 410 aa9□□□□□ -0.97
CASC3-205ENST00000577605 ZBTB38Q8NAP3 1195 aaPredicted RBP9□□□□□ -0.97
CASC3-205ENST00000577605 C7orf43Q8WVR3 580 aa9□□□□□ -0.97
CASC3-205ENST00000577605 METTL22Q9BUU2 404 aaPredicted RBP9□□□□□ -0.97
CASC3-205ENST00000577605 TAOK3Q9H2K8 898 aa9□□□□□ -0.97
CASC3-205ENST00000577605 RNF181Q9P0P0 153 aa9□□□□□ -0.97
CASC3-205ENST00000577605 ZNF521Q96K83 1311 aa9□□□□□ -0.97
CASC3-205ENST00000577605 FKBP4Q02790 459 aaKnown RBP eCLIP8.99□□□□□ -0.97
CASC3-205ENST00000577605 EXOSC9Q06265 439 aaKnown RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 SF3B3Q15393 1217 aaKnown RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 DDX46Q7L014 1031 aaKnown RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 SUPT20HQ8NEM7 779 aa8.99□□□□□ -0.97
CASC3-205ENST00000577605 PSMD1Q99460 953 aa8.99□□□□□ -0.97
CASC3-205ENST00000577605 PHAXQ9H814 394 aaKnown RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 CWC25Q9NXE8 425 aaPredicted RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
CASC3-205ENST00000577605 BHMG1C9JSJ3 638 aaPredicted RBP8.98□□□□□ -0.97
CASC3-205ENST00000577605 NFKBIEO00221 500 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms