RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 ALDH1B1P30837 517 aa20.26■□□□□ 0.83
ERCC4-208ENST00000576348 SKAP1Q86WV1 359 aa20.26■□□□□ 0.83
ERCC4-208ENST00000576348 SPON1Q9HCB6 807 aa20.26■□□□□ 0.83
ERCC4-208ENST00000576348 NRXN2Q9P2S2 1712 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 BBOX1O75936 387 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 PDE4AP27815 886 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 TNNI3KQ59H18 835 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 STYK1Q6J9G0 422 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 TMC4Q7Z404 712 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 NEUROD6Q96NK8 337 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 GPR108Q9NPR9 543 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 FPGT-TNNI3KV9GXZ4 949 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 MYH3P11055 1940 aa20.25■□□□□ 0.83
ERCC4-208ENST00000576348 PPEF1O14829 653 aaPredicted RBP20.24■□□□□ 0.83
ERCC4-208ENST00000576348 KCNJ4P48050 445 aa20.24■□□□□ 0.83
ERCC4-208ENST00000576348 ATP2B3Q16720 1220 aa20.24■□□□□ 0.83
ERCC4-208ENST00000576348 C16orf71Q8IYS4 520 aaPredicted RBP20.24■□□□□ 0.83
ERCC4-208ENST00000576348 CNKSR1Q969H4 720 aa20.24■□□□□ 0.83
ERCC4-208ENST00000576348 MX1P20591 662 aa20.23■□□□□ 0.83
ERCC4-208ENST00000576348 CHRNA5P30532 468 aa20.23■□□□□ 0.83
ERCC4-208ENST00000576348 CHRNDQ07001 517 aa20.23■□□□□ 0.83
ERCC4-208ENST00000576348 PUM3Q15397 648 aaKnown RBP20.23■□□□□ 0.83
ERCC4-208ENST00000576348 GORABQ5T7V8 394 aa20.23■□□□□ 0.83
ERCC4-208ENST00000576348 HELBQ8NG08 1087 aaPredicted RBP20.23■□□□□ 0.83
ERCC4-208ENST00000576348 PDE8BO95263 885 aa20.22■□□□□ 0.83
ERCC4-208ENST00000576348 OTUD7AQ8TE49 926 aaPredicted RBP20.22■□□□□ 0.83
ERCC4-208ENST00000576348 EAF2Q96CJ1 260 aaPredicted RBP20.22■□□□□ 0.83
ERCC4-208ENST00000576348 CCDC8Q9H0W5 538 aaPredicted RBP20.22■□□□□ 0.83
ERCC4-208ENST00000576348 MINPP1Q9UNW1 487 aa20.22■□□□□ 0.83
ERCC4-208ENST00000576348 LRP5O75197 1615 aa20.22■□□□□ 0.83
ERCC4-208ENST00000576348 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
ERCC4-208ENST00000576348 SLC5A1P13866 664 aa20.21■□□□□ 0.83
ERCC4-208ENST00000576348 ANKIB1Q9P2G1 1089 aa20.21■□□□□ 0.83
ERCC4-208ENST00000576348 SOCS7O14512 581 aa20.2■□□□□ 0.82
ERCC4-208ENST00000576348 TAF5LO75529 589 aa20.2■□□□□ 0.82
ERCC4-208ENST00000576348 IFIT1P09914 478 aaKnown RBP20.2■□□□□ 0.82
ERCC4-208ENST00000576348 PTGER2P43116 358 aa20.2■□□□□ 0.82
ERCC4-208ENST00000576348 PLEKHM2Q8IWE5 1019 aa20.2■□□□□ 0.82
ERCC4-208ENST00000576348 DPEP1P16444 411 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 PDE1AP54750 535 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 TGFB2P61812 414 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 TIMM10P62072 90 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 VGLL2Q8N8G2 317 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 LPIN2Q92539 896 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 SGIP1Q9BQI5 828 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 ECHDC1Q9NTX5 307 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.19■□□□□ 0.82
ERCC4-208ENST00000576348 ZNF609O15014 1411 aa20.19■□□□□ 0.82
ERCC4-208ENST00000576348 A0A0G2JLW4 131 aa20.18■□□□□ 0.82
ERCC4-208ENST00000576348 ERC2O15083 957 aa20.18■□□□□ 0.82
ERCC4-208ENST00000576348 PRPF40BQ6NWY9 871 aaKnown RBP20.18■□□□□ 0.82
ERCC4-208ENST00000576348 XDHP47989 1333 aa20.18■□□□□ 0.82
ERCC4-208ENST00000576348 UBE4AQ14139 1066 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 CCDC158Q5M9N0 1113 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 SP8Q8IXZ3 490 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 DBNDD2Q9BQY9 259 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 TLR7Q9NYK1 1049 aaKnown RBP20.17■□□□□ 0.82
ERCC4-208ENST00000576348 DBNLQ9UJU6 430 aaKnown RBP20.17■□□□□ 0.82
ERCC4-208ENST00000576348 ATP6V0A2Q9Y487 856 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 AOX1Q06278 1338 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 TTC41PQ6P2S7 1318 aa20.17■□□□□ 0.82
ERCC4-208ENST00000576348 TTC39AQ5SRH9 613 aa20.16■□□□□ 0.82
ERCC4-208ENST00000576348 TSHZ3Q63HK5 1081 aa20.16■□□□□ 0.82
ERCC4-208ENST00000576348 TTLL6Q8N841 843 aa20.16■□□□□ 0.82
ERCC4-208ENST00000576348 XAGE2Q96GT9 111 aa20.16■□□□□ 0.82
ERCC4-208ENST00000576348 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
ERCC4-208ENST00000576348 STAP2Q9UGK3 403 aa20.16■□□□□ 0.82
ERCC4-208ENST00000576348 NSFL1CQ9UNZ2 370 aaKnown RBP20.16■□□□□ 0.82
ERCC4-208ENST00000576348 ANKRD31Q8N7Z5 1873 aa20.16■□□□□ 0.82
ERCC4-208ENST00000576348 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
ERCC4-208ENST00000576348 ADORA1P30542 326 aa20.15■□□□□ 0.82
ERCC4-208ENST00000576348 GGA1Q9UJY5 639 aa20.15■□□□□ 0.82
ERCC4-208ENST00000576348 LEMD3Q9Y2U8 911 aa20.15■□□□□ 0.82
ERCC4-208ENST00000576348 ZNF804BA4D1E1 1349 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 UFL1O94874 794 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 ATP2B4P23634 1241 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 GPSM2P81274 684 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 VPS37DQ86XT2 251 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 OSBPL3Q9H4L5 887 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 PIM2Q9P1W9 311 aa20.14■□□□□ 0.81
ERCC4-208ENST00000576348 SALL3Q9BXA9 1300 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 C6orf229H3BNL8 230 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 FGFR2P21802 821 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 CAVIN4Q5BKX8 364 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 TTC22Q5TAA0 569 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 CC2D2BQ6DHV5 1058 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 DPP8Q6V1X1 898 aaPredicted RBP20.13■□□□□ 0.81
ERCC4-208ENST00000576348 MPNDQ8N594 471 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 COL4A1P02462 1669 aa20.13■□□□□ 0.81
ERCC4-208ENST00000576348 SNAP23O00161 211 aa20.12■□□□□ 0.81
ERCC4-208ENST00000576348 GNL3LQ9NVN8 582 aaKnown RBP20.12■□□□□ 0.81
ERCC4-208ENST00000576348 TRIM6-TRIM34B2RNG4 842 aa20.11■□□□□ 0.81
ERCC4-208ENST00000576348 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
ERCC4-208ENST00000576348 COL11A2P13942 1736 aaPredicted RBP20.1■□□□□ 0.81
ERCC4-208ENST00000576348 UQCRFS1P1P0C7P4 283 aa20.1■□□□□ 0.81
ERCC4-208ENST00000576348 ATP5JP18859 108 aa20.1■□□□□ 0.81
ERCC4-208ENST00000576348 BMP2KLQ5H9B9 411 aa20.1■□□□□ 0.81
ERCC4-208ENST00000576348 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms