RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
SCARF1-209ENST00000576012 SFPQP23246 707 aaKnown RBP eCLIP16.98■□□□□ 0.31
SCARF1-209ENST00000576012 RESTQ13127 1097 aa16.98■□□□□ 0.31
SCARF1-209ENST00000576012 CARD6Q9BX69 1037 aa16.98■□□□□ 0.31
SCARF1-209ENST00000576012 TM6SF1Q9BZW5 370 aa16.98■□□□□ 0.31
SCARF1-209ENST00000576012 APOBRQ0VD83 1088 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 PROSER3Q2NL68 480 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 TMCO3Q6UWJ1 677 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 GJB4Q9NTQ9 266 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 FHOD1Q9Y613 1164 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 KIF20BQ96Q89 1820 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 HSP90AB4PQ58FF6 505 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 MRFAP1L1Q96HT8 127 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 CFAP45Q9UL16 551 aa16.97■□□□□ 0.31
SCARF1-209ENST00000576012 PLA2G4AP47712 749 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 ARMCX5Q6P1M9 558 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 LMOD2Q6P5Q4 547 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 C10orf67Q8IYJ2 551 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 ALKQ9UM73 1620 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 SCRN1Q12765 414 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 KRBA2Q6ZNG9 492 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 NEK1Q96PY6 1258 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 ANO10Q9NW15 660 aa16.96■□□□□ 0.31
SCARF1-209ENST00000576012 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 TEX35Q5T0J7 233 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 MPRIPQ6WCQ1 1025 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 NBPF11Q86T75 865 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 ATP1A3P13637 1013 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 ANKRD1Q15327 319 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.95■□□□□ 0.3
SCARF1-209ENST00000576012 TTC41PQ6P2S7 1318 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 SASH1O94885 1247 aa16.95■□□□□ 0.3
SCARF1-209ENST00000576012 PIP4K2AP48426 406 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-209ENST00000576012 UTP14AQ9BVJ6 771 aaKnown RBP16.95■□□□□ 0.3
SCARF1-209ENST00000576012 TRIM66O15016 1216 aa16.94■□□□□ 0.3
SCARF1-209ENST00000576012 LTKP29376 864 aa16.94■□□□□ 0.3
SCARF1-209ENST00000576012 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
SCARF1-209ENST00000576012 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
SCARF1-209ENST00000576012 RAD51AP2Q09MP3 1159 aa16.94■□□□□ 0.3
SCARF1-209ENST00000576012 SMARCE1Q969G3 411 aa16.94■□□□□ 0.3
SCARF1-209ENST00000576012 RBM43Q6ZSC3 357 aaKnown RBP16.94■□□□□ 0.3
SCARF1-209ENST00000576012 PDILTQ8N807 584 aa16.94■□□□□ 0.3
SCARF1-209ENST00000576012 BICC1Q9H694 974 aaKnown RBP16.94■□□□□ 0.3
SCARF1-209ENST00000576012 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
SCARF1-209ENST00000576012 NEMFO60524 1076 aa16.93■□□□□ 0.3
SCARF1-209ENST00000576012 CYP2C19P33261 490 aa16.93■□□□□ 0.3
SCARF1-209ENST00000576012 EPB41L2O43491 1005 aaKnown RBP16.92■□□□□ 0.3
SCARF1-209ENST00000576012 NDUFA8P51970 172 aa16.92■□□□□ 0.3
SCARF1-209ENST00000576012 RIMS1Q86UR5 1692 aaKnown RBP16.92■□□□□ 0.3
SCARF1-209ENST00000576012 ANKRD65E5RJM6 399 aa16.92■□□□□ 0.3
SCARF1-209ENST00000576012 SUCLG2Q96I99 432 aa16.92■□□□□ 0.3
SCARF1-209ENST00000576012 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
SCARF1-209ENST00000576012 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
SCARF1-209ENST00000576012 SECISBP2LQ93073 1101 aaKnown RBP16.92■□□□□ 0.3
SCARF1-209ENST00000576012 OAS2P29728 719 aaKnown RBP16.91■□□□□ 0.3
SCARF1-209ENST00000576012 CDC25BP30305 580 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 LMAN1P49257 510 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 MAP3K5Q99683 1374 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 SERPINC1P01008 464 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 MARCKSP29966 332 aaPredicted RBP16.91■□□□□ 0.3
SCARF1-209ENST00000576012 EVCP57679 992 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 LCMT1Q9UIC8 334 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 PCDHA7Q9UN72 937 aa16.91■□□□□ 0.3
SCARF1-209ENST00000576012 TAF5LO75529 589 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 CYP21A2P08686 494 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 MYL6BP14649 208 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 H2AFXP16104 143 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-209ENST00000576012 STK38Q15208 465 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 SARM1Q6SZW1 724 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 NAT10Q9H0A0 1025 aaKnown RBP16.9■□□□□ 0.3
SCARF1-209ENST00000576012 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-209ENST00000576012 ADCY9O60503 1353 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 FAM160A1Q05DH4 1040 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 ARGLU1Q9NWB6 273 aaPredicted RBP16.9■□□□□ 0.3
SCARF1-209ENST00000576012 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
SCARF1-209ENST00000576012 SASH3O75995 380 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 DPF2Q92785 391 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 ROBO2Q9HCK4 1378 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 BTBD11A6QL63 1104 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 NRDCO43847 1150 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
SCARF1-209ENST00000576012 RSPH14Q9UHP6 348 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 FEZ2Q9UHY8 353 aaPredicted RBP16.89■□□□□ 0.29
SCARF1-209ENST00000576012 CLIC4Q9Y696 253 aa16.89■□□□□ 0.29
SCARF1-209ENST00000576012 GSDMDP57764 484 aa16.88■□□□□ 0.29
SCARF1-209ENST00000576012 ORC3Q9UBD5 711 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-209ENST00000576012 FANCGO15287 622 aa16.88■□□□□ 0.29
SCARF1-209ENST00000576012 TTLL5Q6EMB2 1281 aa16.88■□□□□ 0.29
SCARF1-209ENST00000576012 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
SCARF1-209ENST00000576012 HAND2P61296 217 aa16.88■□□□□ 0.29
SCARF1-209ENST00000576012 GNG11P61952 73 aa16.88■□□□□ 0.29
SCARF1-209ENST00000576012 KARSQ15046 597 aaKnown RBP16.88■□□□□ 0.29
SCARF1-209ENST00000576012 ZSCAN16Q9H4T2 348 aaPredicted RBP16.88■□□□□ 0.29
SCARF1-209ENST00000576012 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
SCARF1-209ENST00000576012 EIF4A1P60842 406 aaKnown RBP16.87■□□□□ 0.29
SCARF1-209ENST00000576012 MCM6Q14566 821 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms