RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 SRGAP3O43295 1099 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 CAVIN2O95810 425 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 TBC1D25Q3MII6 688 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 CC2D1AQ6P1N0 951 aaPredicted RBP9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 LRRC31Q6UY01 552 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 GPR161Q8N6U8 529 aaKnown RBP9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 SPC24Q8NBT2 197 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 ZC3H15Q8WU90 426 aaKnown RBP9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 KCNB2Q92953 911 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 ADAMTS8Q9UP79 889 aa9.23□□□□□ -0.93
TOM1L1-220ENST00000575333 GCKP35557 465 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 UBE2HP62256 183 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 MVPQ14764 893 aaKnown RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 KCNV1Q6PIU1 500 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 DNAJC14Q6Y2X3 702 aaPredicted RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 NFXL1Q6ZNB6 911 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 SDCCAG8Q86SQ7 713 aaPredicted RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 CCDC50Q8IVM0 306 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 AMOTL1Q8IY63 956 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 CEP112Q8N8E3 955 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 INTS4Q96HW7 963 aaKnown RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 TMX3Q96JJ7 454 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 JPH2Q9BR39 696 aaPredicted RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 STK31Q9BXU1 1019 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 IQCGQ9H095 443 aaKnown RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 COL17A1Q9UMD9 1497 aaPredicted RBP9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 LAMC1P11047 1609 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 ADGRL1O94910 1474 aa9.22□□□□□ -0.93
TOM1L1-220ENST00000575333 H7C1W4 665 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 CDC45O75419 566 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 CCNHP51946 323 aaPredicted RBP9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 CPLX2Q6PUV4 134 aaKnown RBP9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 IQCA1Q86XH1 822 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 PLA2G4DQ86XP0 818 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 SPATS2Q86XZ4 545 aaKnown RBP9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 MAGEC3Q8TD91 643 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 THOC1Q96FV9 657 aaKnown RBP9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 LZTS2Q9BRK4 669 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 GOPCQ9HD26 462 aa9.21□□□□□ -0.93
TOM1L1-220ENST00000575333 TTC41PQ6P2S7 1318 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 PHLPP2Q6ZVD8 1323 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 RAPGEF3O95398 923 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 TUBB4BP68371 445 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 NUCB1Q02818 461 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 SF3B2Q13435 895 aaKnown RBP9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 BRD3Q15059 726 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 DRC7Q8IY82 874 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 NBPF15Q8N660 670 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 ZNF396Q96N95 335 aaPredicted RBP9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 UBA5Q9GZZ9 404 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 MAF1Q9H063 256 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 ZSWIM6Q9HCJ5 1215 aa9.21□□□□□ -0.94
TOM1L1-220ENST00000575333 ZNF644Q9H582 1327 aaPredicted RBP9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 CCDC151A5D8V7 595 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 SNPHO15079 494 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 ERC2O15083 957 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 FAM163BP0C2L3 166 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 ZNF75DP51815 510 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 SFSWAPQ12872 951 aaKnown RBP9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 TMED1Q13445 227 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 PKP1Q13835 747 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 BRAPQ7Z569 592 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 CCAR2Q8N163 923 aaKnown RBP9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 FAM71BQ8TC56 605 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 MIPOL1Q8TD10 442 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 KAT2BQ92831 832 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 SAAL1Q96ER3 474 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 BLOC1S6Q9UL45 172 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 ZNF232Q9UNY5 417 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 PCDHGA10Q9Y5H3 936 aa9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 WDR33Q9C0J8 1336 aaKnown RBP9.2□□□□□ -0.94
TOM1L1-220ENST00000575333 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 GOLGA6CA6NDK9 693 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 GOLGA6BA6NDN3 693 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 MAP2K7O14733 419 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 GOLGA6DP0CG33 693 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 SKILP12757 684 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 RAB27AP51159 221 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 CLNS1AP54105 237 aaKnown RBP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 SNW1Q13573 536 aaKnown RBP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 GPIHBP1Q8IV16 184 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 MAB21L3Q8N8X9 362 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 ACRBPQ8NEB7 543 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 PLEKHG4BQ96PX9 1271 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 GOLGA6AQ9NYA3 693 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 CEP126Q9P2H0 1117 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 DNAI1Q9UI46 699 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 ABCC1P33527 1531 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 TADA3O75528 432 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 EZRP15311 586 aaKnown RBP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 INPP5BP32019 993 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 HNRNPMP52272 730 aaKnown RBP eCLIP9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 GSDMDP57764 484 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 RASA3Q14644 834 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 PLCB4Q15147 1175 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 HHATQ5VTY9 493 aa9.19□□□□□ -0.94
TOM1L1-220ENST00000575333 ISM2Q6H9L7 571 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms