RNA–Protein interactions for RNA: ENST00000575171.1

NXN-208, Transcript of nucleoredoxin, human

TSL 2

Gene NXN, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXN-208	ENST00000575171	FMNL2	Q96PY5	1086 aa		12.64	□□□□□ -0.39
NXN-208	ENST00000575171	SLC4A9	Q96Q91	983 aa		12.64	□□□□□ -0.39
NXN-208	ENST00000575171	SPSB2	Q99619	263 aa		12.64	□□□□□ -0.39
NXN-208	ENST00000575171	PCDHGC3	Q9UN70	934 aa		12.64	□□□□□ -0.39
NXN-208	ENST00000575171	ADH1B	P00325	375 aa		12.63	□□□□□ -0.39
NXN-208	ENST00000575171	SKIV2L	Q15477	1246 aa	Known RBP	12.63	□□□□□ -0.39
NXN-208	ENST00000575171	RNF19B	Q6ZMZ0	732 aa		12.63	□□□□□ -0.39
NXN-208	ENST00000575171	DNAJC10	Q8IXB1	793 aa		12.63	□□□□□ -0.39
NXN-208	ENST00000575171	LINC00116	Q8NCU8	138 aa		12.63	□□□□□ -0.39
NXN-208	ENST00000575171	ZNF496	Q96IT1	587 aa	Predicted RBP	12.63	□□□□□ -0.39
NXN-208	ENST00000575171	POLR3E	Q9NVU0	708 aa		12.63	□□□□□ -0.39
NXN-208	ENST00000575171	KCP	Q6ZWJ8	1503 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	CCDC27	Q2M243	656 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	BRICD5	Q6PL45	260 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	WWC1	Q8IX03	1113 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	NKX2-3	Q8TAU0	364 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	LIMD1	Q9UGP4	676 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	PCNT	O95613	3336 aa		12.62	□□□□□ -0.39
NXN-208	ENST00000575171	HEG1	Q9ULI3	1381 aa		12.61	□□□□□ -0.39
NXN-208	ENST00000575171	HSPA6	P17066	643 aa		12.61	□□□□□ -0.39
NXN-208	ENST00000575171	HMGB2	P26583	209 aa	Known RBP	12.61	□□□□□ -0.39
NXN-208	ENST00000575171	MSL1	Q68DK7	614 aa		12.61	□□□□□ -0.39
NXN-208	ENST00000575171	AMIGO3	Q86WK7	504 aa		12.61	□□□□□ -0.39
NXN-208	ENST00000575171	GOPC	Q9HD26	462 aa		12.61	□□□□□ -0.39
NXN-208	ENST00000575171	CD2AP	Q9Y5K6	639 aa		12.61	□□□□□ -0.39
NXN-208	ENST00000575171	C6orf229	H3BNL8	230 aa		12.6	□□□□□ -0.39
NXN-208	ENST00000575171	GNAI1	P63096	354 aa		12.6	□□□□□ -0.39
NXN-208	ENST00000575171	TUSC1	Q2TAM9	212 aa		12.6	□□□□□ -0.39
NXN-208	ENST00000575171	IFT57	Q9NWB7	429 aa		12.6	□□□□□ -0.39
NXN-208	ENST00000575171	BABAM1	Q9NWV8	329 aa		12.6	□□□□□ -0.39
NXN-208	ENST00000575171	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.59	□□□□□ -0.39
NXN-208	ENST00000575171	PRAMEF22	A3QJZ6	481 aa		12.59	□□□□□ -0.39
NXN-208	ENST00000575171	CHL1	O00533	1208 aa		12.59	□□□□□ -0.39
NXN-208	ENST00000575171	SNRPA1	P09661	255 aa	Known RBP	12.59	□□□□□ -0.39
NXN-208	ENST00000575171	EIF4A1	P60842	406 aa	Known RBP	12.59	□□□□□ -0.39
NXN-208	ENST00000575171	CSPP1	Q1MSJ5	1256 aa		12.59	□□□□□ -0.39
NXN-208	ENST00000575171	MBIP	Q9NS73	344 aa		12.59	□□□□□ -0.39
NXN-208	ENST00000575171	PCDHB15	Q9Y5E8	787 aa		12.59	□□□□□ -0.39
NXN-208	ENST00000575171	STARD3NL	O95772	234 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	CYP19A1	P11511	503 aa	Predicted RBP	12.58	□□□□□ -0.4
NXN-208	ENST00000575171	CRKL	P46109	303 aa	Known RBP	12.58	□□□□□ -0.4
NXN-208	ENST00000575171	MTMR2	Q13614	643 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	SMIM5	Q71RC9	77 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	NGEF	Q8N5V2	710 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	SYMPK	Q92797	1274 aa	Known RBP	12.58	□□□□□ -0.4
NXN-208	ENST00000575171	WDR90	Q96KV7	1748 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	USB1	Q9BQ65	265 aa	Known RBP	12.58	□□□□□ -0.4
NXN-208	ENST00000575171	TEX13A	Q9BXU3	409 aa	Predicted RBP	12.58	□□□□□ -0.4
NXN-208	ENST00000575171	DLG5	Q8TDM6	1919 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	CNTNAP4	Q9C0A0	1308 aa		12.58	□□□□□ -0.4
NXN-208	ENST00000575171	ZNF853	P0CG23	659 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	HNRNPU	Q00839	825 aa	Known RBP eCLIP	12.57	□□□□□ -0.4
NXN-208	ENST00000575171	PRPF38B	Q5VTL8	546 aa	Known RBP	12.57	□□□□□ -0.4
NXN-208	ENST00000575171	RETREG3	Q86VR2	466 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	WDR63	Q8IWG1	891 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	TSR2	Q969E8	191 aa	Known RBP	12.57	□□□□□ -0.4
NXN-208	ENST00000575171	ZBTB3	Q9H5J0	574 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	CCDC87	Q9NVE4	849 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	RTCB	Q9Y3I0	505 aa	Known RBP	12.57	□□□□□ -0.4
NXN-208	ENST00000575171	ARFGEF1	Q9Y6D6	1849 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	ZNF831	Q5JPB2	1677 aa		12.57	□□□□□ -0.4
NXN-208	ENST00000575171	COL5A3	P25940	1745 aa	Predicted RBP	12.57	□□□□□ -0.4
NXN-208	ENST00000575171	SIPA1L3	O60292	1781 aa	Predicted RBP	12.56	□□□□□ -0.4
NXN-208	ENST00000575171	SPDYE5	A6NIY4	337 aa		12.56	□□□□□ -0.4
NXN-208	ENST00000575171	CANX	P27824	592 aa	Known RBP	12.56	□□□□□ -0.4
NXN-208	ENST00000575171	KRT24	Q2M2I5	525 aa		12.56	□□□□□ -0.4
NXN-208	ENST00000575171	RC3H1	Q5TC82	1133 aa	Known RBP	12.56	□□□□□ -0.4
NXN-208	ENST00000575171	PCMTD1	Q96MG8	357 aa	Predicted RBP	12.56	□□□□□ -0.4
NXN-208	ENST00000575171	SLC6A16	Q9GZN6	736 aa		12.56	□□□□□ -0.4
NXN-208	ENST00000575171	ZBTB1	Q9Y2K1	713 aa		12.56	□□□□□ -0.4
NXN-208	ENST00000575171	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.56	□□□□□ -0.4
NXN-208	ENST00000575171	USP16	Q9Y5T5	823 aa		12.56	□□□□□ -0.4
NXN-208	ENST00000575171	IL16	Q14005	1332 aa		12.56	□□□□□ -0.4
NXN-208	ENST00000575171	EIF2S2	P20042	333 aa	Known RBP	12.55	□□□□□ -0.4
NXN-208	ENST00000575171	GGCX	P38435	758 aa		12.55	□□□□□ -0.4
NXN-208	ENST00000575171	PIP4K2A	P48426	406 aa	Predicted RBP	12.55	□□□□□ -0.4
NXN-208	ENST00000575171	MSS51	Q4VC12	460 aa		12.55	□□□□□ -0.4
NXN-208	ENST00000575171	INTS5	Q6P9B9	1019 aa	Known RBP	12.55	□□□□□ -0.4
NXN-208	ENST00000575171	C4A	P0C0L4	1744 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	TJP1	Q07157	1748 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	PXDNL	A1KZ92	1463 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	RPS6KA4	O75676	772 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	A1BG	P04217	495 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	SSFA2	P28290	1259 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	FAM160A2	Q8N612	972 aa	Predicted RBP	12.54	□□□□□ -0.4
NXN-208	ENST00000575171	PROCA1	Q8NCQ7	364 aa	Predicted RBP	12.54	□□□□□ -0.4
NXN-208	ENST00000575171	FLAD1	Q8NFF5	587 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
NXN-208	ENST00000575171	MYH16	Q9H6N6	1097 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	ZNF521	Q96K83	1311 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	FANCI	Q9NVI1	1328 aa		12.54	□□□□□ -0.4
NXN-208	ENST00000575171	KDM3B	Q7LBC6	1761 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	UBR2	Q8IWV8	1755 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	ELL2	O00472	640 aa	Predicted RBP	12.53	□□□□□ -0.4
NXN-208	ENST00000575171	LILRB3	O75022	631 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	S1PR4	O95977	384 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	TRAPPC3L	Q5T215	181 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	DUSP27	Q5VZP5	1158 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	PPP1R18	Q6NYC8	613 aa		12.53	□□□□□ -0.4
NXN-208	ENST00000575171	NPM2	Q86SE8	214 aa	Known RBP	12.53	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms