RNA–Protein interactions for RNA: ENST00000574788.5

USP6-205, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 8,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-205ENST00000574788 CCDC89Q8N998 374 aa11.36□□□□□ -0.59
USP6-205ENST00000574788 SPINK5Q9NQ38 1064 aaPredicted RBP11.36□□□□□ -0.59
USP6-205ENST00000574788 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
USP6-205ENST00000574788 ATRIPQ8WXE1 791 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 PLCB3Q01970 1234 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 PPP1R42Q7Z4L9 355 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 MPNDQ8N594 471 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 B4GALNT4Q76KP1 1039 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 TSR2Q969E8 191 aaKnown RBP11.35□□□□□ -0.59
USP6-205ENST00000574788 CCDC141Q6ZP82 1450 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 SPDYE3A6NKU9 549 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 ST5P78524 1137 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 CROCCP2Q86T23 111 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 FERMT3Q86UX7 667 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 CEP120Q8N960 986 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 MGEA5O60502 916 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 KIFAP3Q92845 792 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 BCAP29Q9UHQ4 241 aa11.35□□□□□ -0.59
USP6-205ENST00000574788 ARHGAP24Q8N264 748 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 GBP7Q8N8V2 638 aaPredicted RBP11.34□□□□□ -0.59
USP6-205ENST00000574788 CPLX3Q8WVH0 158 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 TTC36A6NLP5 189 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 VTI1AQ96AJ9 217 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 CALCOCO2Q13137 446 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 GOLGA1Q92805 767 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 IL1RAPL2Q9NP60 686 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 EHBP1L1Q8N3D4 1523 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 CCDC50Q8IVM0 306 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 DBF4Q9UBU7 674 aaPredicted RBP11.34□□□□□ -0.59
USP6-205ENST00000574788 EEF2P13639 858 aaKnown RBP11.34□□□□□ -0.59
USP6-205ENST00000574788 TRMT1Q9NXH9 659 aaKnown RBP11.34□□□□□ -0.59
USP6-205ENST00000574788 NKIRAS1Q9NYS0 192 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 ERBINQ96RT1 1412 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 CUL4BQ13620 913 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 TRMT112Q9UI30 125 aaKnown RBP11.34□□□□□ -0.59
USP6-205ENST00000574788 RAB11FIP4Q86YS3 637 aa11.34□□□□□ -0.59
USP6-205ENST00000574788 PPP1R2P41236 205 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 FYB2Q5VWT5 728 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 ESR2Q92731 530 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 TCHPQ9BT92 498 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 ZMYND15Q9H091 742 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 C6orf229H3BNL8 230 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 ADCY5O95622 1261 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 RILPL1Q5EBL4 403 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 MUM1L1Q5H9M0 696 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 GSDMBQ8TAX9 411 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 PLCG2P16885 1265 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 RPL13P26373 211 aaKnown RBP11.33□□□□□ -0.6
USP6-205ENST00000574788 TRPC3Q13507 836 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 A0A1B0GUA9 196 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 PHLDB2Q86SQ0 1253 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 CCDC26Q8TAB7 109 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 CABP1Q9NZU7 370 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 CAMSAP2Q08AD1 1489 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 TSPY3P0CV98 308 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 TSPY8P0CW00 308 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 RSPH3Q86UC2 560 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 EXOC6BQ9Y2D4 811 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 TNNC1P63316 161 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 VCX3AQ9NNX9 186 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 MRVI1Q9Y6F6 885 aa11.33□□□□□ -0.6
USP6-205ENST00000574788 PPP1R7Q15435 360 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 DUSP27Q5VZP5 1158 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.32□□□□□ -0.6
USP6-205ENST00000574788 FAM13AO94988 1023 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 UQCRFS1P1P0C7P4 283 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 SEPT10Q9P0V9 454 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 STX8Q9UNK0 236 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 CLGNO14967 610 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 IFIT1BQ5T764 474 aaKnown RBP11.32□□□□□ -0.6
USP6-205ENST00000574788 LRRC9Q6ZRR7 1453 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 RIOK3O14730 519 aaKnown RBP11.32□□□□□ -0.6
USP6-205ENST00000574788 CALM1P0DP23 149 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 CALM2P0DP24 149 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 CALM3P0DP25 149 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 FRMD4BQ9Y2L6 1034 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 EFCAB5A4FU69 1503 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 ZBTB24O43167 697 aaPredicted RBP11.32□□□□□ -0.6
USP6-205ENST00000574788 WTAPQ15007 396 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 CCDC42Q96M95 316 aa11.32□□□□□ -0.6
USP6-205ENST00000574788 ACTN4O43707 911 aaKnown RBP11.31□□□□□ -0.6
USP6-205ENST00000574788 IRX4P78413 519 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
USP6-205ENST00000574788 CCDC125Q86Z20 511 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 GBP1P32455 592 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 BRDTQ58F21 947 aaPredicted RBP11.31□□□□□ -0.6
USP6-205ENST00000574788 INTS8Q75QN2 995 aaKnown RBP11.31□□□□□ -0.6
USP6-205ENST00000574788 NEK11Q8NG66 645 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 STX10O60499 249 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 KIFC2Q96AC6 838 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 MCM6Q14566 821 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
USP6-205ENST00000574788 GNA11P29992 359 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms