RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 TFCP2Q12800 502 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 ARID5BQ14865 1188 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 TDRD7Q8NHU6 1098 aaKnown RBP17.49■□□□□ 0.39
ABR-228ENST00000574437 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
ABR-228ENST00000574437 RESTQ13127 1097 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 COPS6Q7L5N1 327 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 PLA2G4DQ86XP0 818 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 ERCC4Q92889 916 aaPredicted RBP17.48■□□□□ 0.39
ABR-228ENST00000574437 DBNLQ9UJU6 430 aaKnown RBP17.48■□□□□ 0.39
ABR-228ENST00000574437 CFAP45Q9UL16 551 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 LTN1O94822 1766 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 CCDC112Q8NEF3 446 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 DMTNQ08495 405 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 C11orf57Q6ZUT1 292 aaPredicted RBP17.48■□□□□ 0.39
ABR-228ENST00000574437 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
ABR-228ENST00000574437 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
ABR-228ENST00000574437 N4BP2Q86UW6 1770 aaPredicted RBP17.47■□□□□ 0.39
ABR-228ENST00000574437 CYP21A2P08686 494 aa17.47■□□□□ 0.39
ABR-228ENST00000574437 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
ABR-228ENST00000574437 SLFNL1Q499Z3 407 aa17.47■□□□□ 0.39
ABR-228ENST00000574437 DBNDD2Q9BQY9 259 aa17.47■□□□□ 0.39
ABR-228ENST00000574437 NEURL1BA8MQ27 555 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 SCRN1Q12765 414 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 GCKRQ14397 625 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 CCDC73Q6ZRK6 1079 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 UBE3BQ7Z3V4 1068 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 NCBP1Q09161 790 aaKnown RBP17.46■□□□□ 0.39
ABR-228ENST00000574437 NEUROD6Q96NK8 337 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 TRMT1Q9NXH9 659 aaKnown RBP17.46■□□□□ 0.39
ABR-228ENST00000574437 PXDNQ92626 1479 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 SMTNL1A8MU46 457 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 PTCD1O75127 700 aaKnown RBP17.46■□□□□ 0.39
ABR-228ENST00000574437 APOBRQ0VD83 1088 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 TNNI3KQ59H18 835 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 ANKRD7Q92527 254 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 USP16Q9Y5T5 823 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 FPGT-TNNI3KV9GXZ4 949 aa17.46■□□□□ 0.39
ABR-228ENST00000574437 CTIFO43310 598 aaKnown RBP17.45■□□□□ 0.38
ABR-228ENST00000574437 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.45■□□□□ 0.38
ABR-228ENST00000574437 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
ABR-228ENST00000574437 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
ABR-228ENST00000574437 ERBB3P21860 1342 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 SPATA31A3Q5VYP0 1347 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 RGPD2P0DJD1 1756 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
ABR-228ENST00000574437 ME1P48163 572 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 CHST3Q7LGC8 479 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 ZSCAN16Q9H4T2 348 aaPredicted RBP17.45■□□□□ 0.38
ABR-228ENST00000574437 SNRKQ9NRH2 765 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 COL15A1P39059 1388 aa17.45■□□□□ 0.38
ABR-228ENST00000574437 RBM43Q6ZSC3 357 aaKnown RBP17.44■□□□□ 0.38
ABR-228ENST00000574437 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.44■□□□□ 0.38
ABR-228ENST00000574437 V9GYY5 206 aaPredicted RBP17.44■□□□□ 0.38
ABR-228ENST00000574437 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
ABR-228ENST00000574437 PDIA6Q15084 440 aa17.44■□□□□ 0.38
ABR-228ENST00000574437 ATP5JP18859 108 aa17.44■□□□□ 0.38
ABR-228ENST00000574437 MCMDC2Q4G0Z9 681 aa17.44■□□□□ 0.38
ABR-228ENST00000574437 CEP135Q66GS9 1140 aa17.44■□□□□ 0.38
ABR-228ENST00000574437 ALDH8A1Q9H2A2 487 aaPredicted RBP17.44■□□□□ 0.38
ABR-228ENST00000574437 TSGA10IPQ3SY00 556 aa17.43■□□□□ 0.38
ABR-228ENST00000574437 PTPDC1A2A3K4 754 aa17.43■□□□□ 0.38
ABR-228ENST00000574437 USP27XA6NNY8 438 aa17.43■□□□□ 0.38
ABR-228ENST00000574437 SKILP12757 684 aa17.43■□□□□ 0.38
ABR-228ENST00000574437 STX1AQ16623 288 aa17.43■□□□□ 0.38
ABR-228ENST00000574437 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
ABR-228ENST00000574437 USPL1Q5W0Q7 1092 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 LRRC8AQ8IWT6 810 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 GOLPH3LQ9H4A5 285 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 UTYO14607 1347 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 MED1Q15648 1581 aaPredicted RBP17.42■□□□□ 0.38
ABR-228ENST00000574437 GOLIM4O00461 696 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 STOX1Q6ZVD7 989 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 FSIP1Q8NA03 581 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 PTPN12Q05209 780 aaKnown RBP17.42■□□□□ 0.38
ABR-228ENST00000574437 IQCB1Q15051 598 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 SDF4Q9BRK5 362 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 METTL22Q9BUU2 404 aaPredicted RBP17.42■□□□□ 0.38
ABR-228ENST00000574437 PAXBP1Q9Y5B6 917 aa17.42■□□□□ 0.38
ABR-228ENST00000574437 A0A087WZG4 1122 aa17.41■□□□□ 0.38
ABR-228ENST00000574437 NPHP1O15259 732 aa17.41■□□□□ 0.38
ABR-228ENST00000574437 PTPN14Q15678 1187 aa17.41■□□□□ 0.38
ABR-228ENST00000574437 ZNF609O15014 1411 aa17.41■□□□□ 0.38
ABR-228ENST00000574437 ZRSR1Q15695 479 aaKnown RBP17.41■□□□□ 0.38
ABR-228ENST00000574437 AOPEPQ8N6M6 819 aa17.41■□□□□ 0.38
ABR-228ENST00000574437 NSUN7Q8NE18 718 aaKnown RBP17.41■□□□□ 0.38
ABR-228ENST00000574437 CCDC69A6NI79 296 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 UTP14CQ5TAP6 766 aaKnown RBP17.4■□□□□ 0.38
ABR-228ENST00000574437 FMNL2Q96PY5 1086 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 A0A0G2JLW4 131 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 DHX32Q7L7V1 743 aaKnown RBP17.4■□□□□ 0.38
ABR-228ENST00000574437 COPRSQ9NQ92 184 aa17.4■□□□□ 0.38
ABR-228ENST00000574437 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
ABR-228ENST00000574437 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms