RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 PROSER3Q2NL68 480 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 RASAL3Q86YV0 1011 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
NCBP3-203ENST00000574379 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 NIP7Q9Y221 180 aaKnown RBP eCLIP12.88□□□□□ -0.35
NCBP3-203ENST00000574379 TRIM17Q9Y577 477 aa12.88□□□□□ -0.35
NCBP3-203ENST00000574379 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
NCBP3-203ENST00000574379 ANXA1P04083 346 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 MKRN3Q13064 507 aaKnown RBP12.87□□□□□ -0.35
NCBP3-203ENST00000574379 TBC1D10BQ4KMP7 808 aaPredicted RBP12.87□□□□□ -0.35
NCBP3-203ENST00000574379 HDGFL1Q5TGJ6 251 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 TTLL7Q6ZT98 887 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 MICALL2Q8IY33 904 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 C8orf58Q8NAV2 365 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 NECTIN2Q92692 538 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 MAP3K15Q6ZN16 1313 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 FANCIQ9NVI1 1328 aa12.87□□□□□ -0.35
NCBP3-203ENST00000574379 KLRG2A4D1S0 409 aaPredicted RBP12.86□□□□□ -0.35
NCBP3-203ENST00000574379 TNIP1Q15025 636 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 CLEC4GQ6UXB4 293 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 SAMD7Q7Z3H4 446 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 SLC51AQ86UW1 340 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 OTUD5Q96G74 571 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 CHPF2Q9P2E5 772 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
NCBP3-203ENST00000574379 LAMB2P55268 1798 aa12.86□□□□□ -0.35
NCBP3-203ENST00000574379 COL6A3P12111 3177 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 ERVV-1B6SEH8 477 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 ELL2O00472 640 aaPredicted RBP12.85□□□□□ -0.35
NCBP3-203ENST00000574379 HLFQ16534 295 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 KIF6Q6ZMV9 814 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 TRIOBPQ9H2D6 2365 aa12.85□□□□□ -0.35
NCBP3-203ENST00000574379 SULF1Q8IWU6 871 aa12.84□□□□□ -0.35
NCBP3-203ENST00000574379 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
NCBP3-203ENST00000574379 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
NCBP3-203ENST00000574379 CUL9Q8IWT3 2517 aa12.83□□□□□ -0.36
NCBP3-203ENST00000574379 SNED1Q8TER0 1413 aa12.83□□□□□ -0.36
NCBP3-203ENST00000574379 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
NCBP3-203ENST00000574379 XAGE3Q8WTP9 111 aa12.83□□□□□ -0.36
NCBP3-203ENST00000574379 DPF3Q92784 378 aa12.83□□□□□ -0.36
NCBP3-203ENST00000574379 DBF4Q9UBU7 674 aaPredicted RBP12.83□□□□□ -0.36
NCBP3-203ENST00000574379 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
NCBP3-203ENST00000574379 MYCP01106 439 aaPredicted RBP12.82□□□□□ -0.36
NCBP3-203ENST00000574379 TWISTNBQ3B726 338 aaPredicted RBP12.82□□□□□ -0.36
NCBP3-203ENST00000574379 GIGYF2Q6Y7W6 1299 aaKnown RBP12.82□□□□□ -0.36
NCBP3-203ENST00000574379 COPS6Q7L5N1 327 aa12.82□□□□□ -0.36
NCBP3-203ENST00000574379 NUTM1Q86Y26 1132 aa12.82□□□□□ -0.36
NCBP3-203ENST00000574379 SUPT20HQ8NEM7 779 aa12.82□□□□□ -0.36
NCBP3-203ENST00000574379 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
NCBP3-203ENST00000574379 RBM17Q96I25 401 aaKnown RBP12.82□□□□□ -0.36
NCBP3-203ENST00000574379 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
NCBP3-203ENST00000574379 DDX60Q8IY21 1712 aaKnown RBP12.82□□□□□ -0.36
NCBP3-203ENST00000574379 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
NCBP3-203ENST00000574379 GOLGA2Q08379 1002 aa12.81□□□□□ -0.36
NCBP3-203ENST00000574379 AIMP1Q12904 312 aaKnown RBP12.81□□□□□ -0.36
NCBP3-203ENST00000574379 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
NCBP3-203ENST00000574379 SLC4A8Q2Y0W8 1093 aa12.81□□□□□ -0.36
NCBP3-203ENST00000574379 CCDC30Q5VVM6 783 aa12.81□□□□□ -0.36
NCBP3-203ENST00000574379 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
NCBP3-203ENST00000574379 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
NCBP3-203ENST00000574379 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.81□□□□□ -0.36
NCBP3-203ENST00000574379 IBTKQ9P2D0 1353 aaPredicted RBP12.81□□□□□ -0.36
NCBP3-203ENST00000574379 CENPFP49454 3210 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 POTEHQ6S545 545 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 OTOP1Q7RTM1 612 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 ZNF34Q8IZ26 560 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 CHMP4AQ9BY43 222 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 R3HDMLQ9H3Y0 253 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 GGA3Q9NZ52 723 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 MYH3P11055 1940 aa12.8□□□□□ -0.36
NCBP3-203ENST00000574379 VAMP4O75379 141 aa12.79□□□□□ -0.36
NCBP3-203ENST00000574379 EGFRP00533 1210 aa12.79□□□□□ -0.36
NCBP3-203ENST00000574379 SREBF2Q12772 1141 aa12.79□□□□□ -0.36
NCBP3-203ENST00000574379 DPP8Q6V1X1 898 aaPredicted RBP12.79□□□□□ -0.36
NCBP3-203ENST00000574379 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
NCBP3-203ENST00000574379 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
NCBP3-203ENST00000574379 E9PSI1 815 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 GPTP24298 496 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 NYXQ9GZU5 481 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 VPS33BQ9H267 617 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
NCBP3-203ENST00000574379 TAF1P21675 1872 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 BRCA2P51587 3418 aa12.78□□□□□ -0.36
NCBP3-203ENST00000574379 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 KIF4BQ2VIQ3 1234 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 CRY2Q49AN0 593 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 HSP90AB3PQ58FF7 597 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 NOM1Q5C9Z4 860 aaKnown RBP12.77□□□□□ -0.37
NCBP3-203ENST00000574379 ANKRD13DQ6ZTN6 518 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 STK31Q9BXU1 1019 aa12.77□□□□□ -0.37
NCBP3-203ENST00000574379 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms