RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
HCFC1R1-206ENST00000574151 LAMB4A4D0S4 1761 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 NBPF26B4DH59 902 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 RIMBP2O15034 1052 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 CAP1Q01518 475 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 SLC9C1Q4G0N8 1177 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 NBPF10Q6P3W6 841 aaKnown RBP13□□□□□ -0.33
HCFC1R1-206ENST00000574151 NBPF11Q86T75 865 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 PHF6Q8IWS0 365 aaKnown RBP eCLIP13□□□□□ -0.33
HCFC1R1-206ENST00000574151 IL17REQ8NFR9 667 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 PPP4R2Q9NY27 417 aa13□□□□□ -0.33
HCFC1R1-206ENST00000574151 KDM3BQ7LBC6 1761 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 ABCC4O15439 1325 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 ALDH1A1P00352 501 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 COL9A1P20849 921 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 PPP2R1AP30153 589 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 PRKG1Q13976 671 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 STXBP5LQ9Y2K9 1186 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 SCN9AQ15858 1988 aa12.99□□□□□ -0.33
HCFC1R1-206ENST00000574151 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
HCFC1R1-206ENST00000574151 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
HCFC1R1-206ENST00000574151 TCIRG1Q13488 830 aa12.98□□□□□ -0.33
HCFC1R1-206ENST00000574151 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
HCFC1R1-206ENST00000574151 PNNQ9H307 717 aaKnown RBP12.98□□□□□ -0.33
HCFC1R1-206ENST00000574151 LAMB2P55268 1798 aa12.98□□□□□ -0.33
HCFC1R1-206ENST00000574151 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 NEFMP07197 916 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 ANKRD13DQ6ZTN6 518 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 RAPGEFL1Q9UHV5 662 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 PTCH2Q9Y6C5 1203 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 VCANP13611 3396 aa12.97□□□□□ -0.33
HCFC1R1-206ENST00000574151 ZNF609O15014 1411 aa12.96□□□□□ -0.33
HCFC1R1-206ENST00000574151 RGL2O15211 777 aa12.96□□□□□ -0.33
HCFC1R1-206ENST00000574151 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
HCFC1R1-206ENST00000574151 WASHC4Q2M389 1173 aa12.96□□□□□ -0.33
HCFC1R1-206ENST00000574151 RTL9Q8NET4 1388 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 UBN2Q6ZU65 1347 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 IGF2BP3O00425 579 aaKnown RBP eCLIP12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 ECE2O60344 883 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 BBOX1O75936 387 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 SNRPA1P09661 255 aaKnown RBP12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 SP3Q02447 781 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 SPRYD7Q5W111 196 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 STAP2Q9UGK3 403 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 NR2E3Q9Y5X4 410 aa12.95□□□□□ -0.34
HCFC1R1-206ENST00000574151 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 A0A1W2PPC1 479 aa12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 GNAT3A8MTJ3 354 aa12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 ZBTB7BO15156 539 aaPredicted RBP12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 CRHR2Q13324 411 aa12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 MTMR10Q9NXD2 777 aa12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
HCFC1R1-206ENST00000574151 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
HCFC1R1-206ENST00000574151 C6orf229H3BNL8 230 aa12.93□□□□□ -0.34
HCFC1R1-206ENST00000574151 NTSR2O95665 410 aa12.93□□□□□ -0.34
HCFC1R1-206ENST00000574151 HTATIP2Q9BUP3 242 aa12.93□□□□□ -0.34
HCFC1R1-206ENST00000574151 FZD1Q9UP38 647 aa12.93□□□□□ -0.34
HCFC1R1-206ENST00000574151 ZSWIM8A7E2V4 1837 aa12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 ERBB4Q15303 1308 aa12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 MANSC4A6NHS7 340 aaPredicted RBP12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 NF2P35240 595 aa12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 INHBEP58166 350 aa12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 SHISA4Q96DD7 197 aa12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 NSFL1CQ9UNZ2 370 aaKnown RBP12.92□□□□□ -0.34
HCFC1R1-206ENST00000574151 VIL1P09327 827 aaKnown RBP12.91□□□□□ -0.34
HCFC1R1-206ENST00000574151 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
HCFC1R1-206ENST00000574151 ARMC9Q7Z3E5 817 aa12.91□□□□□ -0.34
HCFC1R1-206ENST00000574151 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
HCFC1R1-206ENST00000574151 MAP3K15Q6ZN16 1313 aa12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 ERVV-1B6SEH8 477 aa12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 PPP1R42Q7Z4L9 355 aa12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 SLC10A4Q96EP9 437 aa12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 MYOZ2Q9NPC6 264 aa12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 ANGEL1Q9UNK9 670 aaKnown RBP12.9□□□□□ -0.34
HCFC1R1-206ENST00000574151 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 U2AF1L5P0DN76 240 aaPredicted RBP12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 ZNF280AP59817 542 aaPredicted RBP12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 U2AF1Q01081 240 aaKnown RBP eCLIP12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 MTFR1Q15390 333 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 NBPF9Q3BBW0 867 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 GPR153Q6NV75 609 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 ZNF34Q8IZ26 560 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 POLLQ9UGP5 575 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 ZNF646O15015 1829 aaPredicted RBP12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 LAMB1P07942 1786 aa12.89□□□□□ -0.35
HCFC1R1-206ENST00000574151 G3V3G9 751 aa12.88□□□□□ -0.35
HCFC1R1-206ENST00000574151 HCLS1P14317 486 aaPredicted RBP12.88□□□□□ -0.35
HCFC1R1-206ENST00000574151 GRAPQ13588 217 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms