RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 CCDC83Q8IWF9 413 aa8.96□□□□□ -0.98
RPA1-207ENST00000574049 IQSEC3Q9UPP2 1182 aaPredicted RBP8.96□□□□□ -0.98
RPA1-207ENST00000574049 DHX16O60231 1041 aaKnown RBP8.96□□□□□ -0.98
RPA1-207ENST00000574049 RABEP1Q15276 862 aa8.96□□□□□ -0.98
RPA1-207ENST00000574049 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
RPA1-207ENST00000574049 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.98
RPA1-207ENST00000574049 TFCP2Q12800 502 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 SLC4A8Q2Y0W8 1093 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 HSP90AB3PQ58FF7 597 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 TRAPPC3LQ5T215 181 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 RNF20Q5VTR2 975 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 SETDB2Q96T68 719 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 LRRC2Q9BYS8 371 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 GOLGA6L19H0YKK7 550 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 CPA1P15085 419 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 RBM6P78332 1123 aaKnown RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 TRDNQ13061 729 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 RALYLQ86SE5 291 aaKnown RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 ZGPATQ8N5A5 531 aaKnown RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 PUS3Q9BZE2 481 aaKnown RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 MAP3K15Q6ZN16 1313 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 PHLPP1O60346 1717 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 TRPM3Q9HCF6 1732 aaPredicted RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 SDSP20132 328 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 PDE1AP54750 535 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 SKOR2Q2VWA4 1001 aaPredicted RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 GIGYF2Q6Y7W6 1299 aaKnown RBP8.95□□□□□ -0.98
RPA1-207ENST00000574049 CCDC191Q8NCU4 936 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 LINC00116Q8NCU8 138 aa8.95□□□□□ -0.98
RPA1-207ENST00000574049 SNAP23O00161 211 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 TTLL5Q6EMB2 1281 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 UTP14AQ9BVJ6 771 aaKnown RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 TFIP11Q9UBB9 837 aaKnown RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 XIRP1Q702N8 1843 aaKnown RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 IDH1O75874 414 aaKnown RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 LRRC24Q50LG9 513 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 TBC1D32Q96NH3 1257 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 MAP7D2Q96T17 732 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 SDF4Q9BRK5 362 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 GOLGA6L6A8MZA4 724 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 NRDCO43847 1150 aa8.94□□□□□ -0.98
RPA1-207ENST00000574049 IL6STP40189 918 aaPredicted RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 EDC3Q96F86 508 aaKnown RBP8.94□□□□□ -0.98
RPA1-207ENST00000574049 ALS2Q96Q42 1657 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 ANKRD18BA2A2Z9 1011 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 TAF5LO75529 589 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 LARP1BQ659C4 914 aaKnown RBP8.93□□□□□ -0.98
RPA1-207ENST00000574049 ABCF2Q9UG63 623 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 HAND2P61296 217 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 NLRP10Q86W26 655 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 ERC1Q8IUD2 1116 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 SSH3Q8TE77 659 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 PSMD1Q99460 953 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 ATP6V1DQ9Y5K8 247 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 ITGA6P23229 1130 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 SUSD4Q5VX71 490 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 NECAB1Q8N987 351 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 TSC1Q92574 1164 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 GREM2Q9H772 168 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 SEC31BQ9NQW1 1179 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 USP25Q9UHP3 1055 aa8.93□□□□□ -0.98
RPA1-207ENST00000574049 SH3TC1Q8TE82 1336 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 AKAP17AQ02040 695 aaKnown RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 CKAP2LQ8IYA6 745 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 JAG2Q9Y219 1238 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 MARCH6O60337 910 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 RAB11FIP3O75154 756 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 DDX46Q7L014 1031 aaKnown RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 FILIP1Q7Z7B0 1213 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 TRIM5Q9C035 493 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 TLR7Q9NYK1 1049 aaKnown RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 CYP46A1Q9Y6A2 500 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 CCT2P78371 535 aaKnown RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 EN1Q05925 392 aaPredicted RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 TTC22Q5TAA0 569 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 SYNE3Q6ZMZ3 975 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 ZSCAN30Q86W11 494 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 EAF2Q96CJ1 260 aaPredicted RBP8.92□□□□□ -0.98
RPA1-207ENST00000574049 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
RPA1-207ENST00000574049 IGHMBP2P38935 993 aaKnown RBP8.91□□□□□ -0.98
RPA1-207ENST00000574049 TTC39AQ5SRH9 613 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 ARHGEF1Q92888 912 aaKnown RBP8.91□□□□□ -0.98
RPA1-207ENST00000574049 BCL9LQ86UU0 1499 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 BLOC1S2Q6QNY1 142 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 ILDR1Q86SU0 546 aaPredicted RBP8.91□□□□□ -0.98
RPA1-207ENST00000574049 C17orf53Q8N3J3 647 aaPredicted RBP8.91□□□□□ -0.98
RPA1-207ENST00000574049 RETREG2Q8NC44 543 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 KAZALD1Q96I82 304 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 TRERF1Q96PN7 1200 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 BCL9O00512 1426 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 GSPT1P15170 499 aaKnown RBP8.91□□□□□ -0.98
RPA1-207ENST00000574049 PTMSP20962 102 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 ECHDC1Q9NTX5 307 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 PDRG1Q9NUG6 133 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 RGS12O14924 1447 aa8.91□□□□□ -0.98
RPA1-207ENST00000574049 GOLIM4O00461 696 aa8.9□□□□□ -0.98
RPA1-207ENST00000574049 EIF5P55010 431 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms