RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
USP6-204ENST00000572949 SATB1Q01826 763 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 FBF1Q8TES7 1133 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 CGNQ9P2M7 1197 aaKnown RBP10.76□□□□□ -0.69
USP6-204ENST00000572949 TRAPPC3LQ5T215 181 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 MICALCLQ6ZW33 695 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 TICAM2Q86XR7 235 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 RRP36Q96EU6 259 aaKnown RBP10.76□□□□□ -0.69
USP6-204ENST00000572949 RASAL2Q9UJF2 1139 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 DAPK3O43293 454 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 SELENOOQ9BVL4 669 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 TMX1Q9H3N1 280 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 TBC1D31Q96DN5 1066 aa10.76□□□□□ -0.69
USP6-204ENST00000572949 CTAGE5O15320 804 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 SLC5A4Q9NY91 659 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 HARSP12081 509 aaKnown RBP10.75□□□□□ -0.69
USP6-204ENST00000572949 PTPN14Q15678 1187 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 RBM27Q9P2N5 1060 aaKnown RBP10.75□□□□□ -0.69
USP6-204ENST00000572949 URI1O94763 535 aaPredicted RBP10.75□□□□□ -0.69
USP6-204ENST00000572949 TMPOP42166 694 aaKnown RBP10.75□□□□□ -0.69
USP6-204ENST00000572949 HACE1Q8IYU2 909 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 FAM200AQ8TCP9 573 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 CDCA7LQ96GN5 454 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 SMARCA4P51532 1647 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 PRKG1Q13976 671 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 EVI5LQ96CN4 794 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 NBPF3Q9H094 633 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 KIF2AO00139 706 aaPredicted RBP10.75□□□□□ -0.69
USP6-204ENST00000572949 TERF1P54274 439 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 KIF5AQ12840 1032 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 NSD3Q9BZ95 1437 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 GOLGA6L9A6NEM1 432 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 SMARCA5O60264 1052 aaPredicted RBP10.75□□□□□ -0.69
USP6-204ENST00000572949 TMTC2Q8N394 836 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 NPHP3Q7Z494 1330 aa10.75□□□□□ -0.69
USP6-204ENST00000572949 HS2ST1Q7LGA3 356 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 CEP112Q8N8E3 955 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 FSIP1Q8NA03 581 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 GIPC1O14908 333 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 NR1I2O75469 434 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 NSMCE1Q8WV22 266 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 MAGEB6P1A0A0J9YX57 407 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 CNGA1P29973 690 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 FAM47CQ5HY64 1035 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 CNNM2Q9H8M5 875 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 WDR7Q9Y4E6 1490 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 H0YIN7 160 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
USP6-204ENST00000572949 MCM5P33992 734 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 ARHGEF10LQ9HCE6 1279 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 STK25O00506 426 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 DAPK1P53355 1430 aa10.74□□□□□ -0.69
USP6-204ENST00000572949 CFAP157Q5JU67 520 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 CD109Q6YHK3 1445 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 FNBP1Q96RU3 617 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 LDHBP07195 334 aaKnown RBP10.73□□□□□ -0.69
USP6-204ENST00000572949 GABPB2Q8TAK5 448 aaPredicted RBP10.73□□□□□ -0.69
USP6-204ENST00000572949 CCDC125Q86Z20 511 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 GNPATO15228 680 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 AKR1B10O60218 316 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 STX10O60499 249 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 RAB11FIP4Q86YS3 637 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 KIF18AQ8NI77 898 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 THUMPD2Q9BTF0 503 aaKnown RBP10.73□□□□□ -0.69
USP6-204ENST00000572949 E7EVH7 732 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 CCDC6Q16204 474 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 CCDC77Q9BR77 488 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 PKD2L1Q9P0L9 805 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 CTR9Q6PD62 1173 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 DZIP3Q86Y13 1208 aaKnown RBP10.73□□□□□ -0.69
USP6-204ENST00000572949 LARGE2Q8N3Y3 721 aa10.73□□□□□ -0.69
USP6-204ENST00000572949 F6X3S4 739 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 BIN1O00499 593 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 RTN1Q16799 776 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 ISM2Q6H9L7 571 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 ANKRD13DQ6ZTN6 518 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 MCM9Q9NXL9 1143 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 CCDC65Q8IXS2 484 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 TMEM57Q8N5G2 664 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 JARID2Q92833 1246 aaPredicted RBP10.72□□□□□ -0.69
USP6-204ENST00000572949 ORC3Q9UBD5 711 aaPredicted RBP10.72□□□□□ -0.69
USP6-204ENST00000572949 AGTPBP1Q9UPW5 1226 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 H7C1D1 291 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 XRCC6P12956 609 aaKnown RBP eCLIP10.72□□□□□ -0.69
USP6-204ENST00000572949 WDR44Q5JSH3 913 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 BAG6P46379 1132 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 SMC6Q96SB8 1091 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 ERICH4A6NGS2 130 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 KRT5P13647 590 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 IRX3P78415 501 aaPredicted RBP10.72□□□□□ -0.69
USP6-204ENST00000572949 ANKRD2Q9GZV1 360 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 CD2APQ9Y5K6 639 aa10.72□□□□□ -0.69
USP6-204ENST00000572949 ZBTB43O43298 467 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 RBM25P49756 843 aaKnown RBP10.71□□□□□ -0.69
USP6-204ENST00000572949 SMTNP53814 917 aa10.71□□□□□ -0.69
USP6-204ENST00000572949 RBM10P98175 930 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms