RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 XAGE2Q96GT9 111 aa24.9■■□□□ 1.58
CHRNE-202ENST00000572438 DNAJC2Q99543 621 aaKnown RBP24.9■■□□□ 1.58
CHRNE-202ENST00000572438 EDC3Q96F86 508 aaKnown RBP24.89■■□□□ 1.58
CHRNE-202ENST00000572438 MPHOSPH8Q99549 860 aa24.89■■□□□ 1.58
CHRNE-202ENST00000572438 PDE8BO95263 885 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 MCCP23508 829 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 ADORA1P30542 326 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 RABEP1Q15276 862 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 CCDC158Q5M9N0 1113 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 GORABQ5T7V8 394 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 PROM2Q8N271 834 aa24.89■■□□□ 1.57
CHRNE-202ENST00000572438 RFX7Q2KHR2 1363 aa24.88■■□□□ 1.57
CHRNE-202ENST00000572438 ABCC12Q96J65 1359 aa24.88■■□□□ 1.57
CHRNE-202ENST00000572438 PLSCR1O15162 318 aa24.88■■□□□ 1.57
CHRNE-202ENST00000572438 SSFA2P28290 1259 aa24.88■■□□□ 1.57
CHRNE-202ENST00000572438 IGHMBP2P38935 993 aaKnown RBP24.88■■□□□ 1.57
CHRNE-202ENST00000572438 TPTE2Q6XPS3 522 aa24.88■■□□□ 1.57
CHRNE-202ENST00000572438 HSCBQ8IWL3 235 aa24.88■■□□□ 1.57
CHRNE-202ENST00000572438 C3orf67Q6ZVT6 689 aa24.87■■□□□ 1.57
CHRNE-202ENST00000572438 NDUFB9Q9Y6M9 179 aa24.87■■□□□ 1.57
CHRNE-202ENST00000572438 UBR3Q6ZT12 1888 aa24.87■■□□□ 1.57
CHRNE-202ENST00000572438 RAD50Q92878 1312 aa24.87■■□□□ 1.57
CHRNE-202ENST00000572438 IFIT1P09914 478 aaKnown RBP24.86■■□□□ 1.57
CHRNE-202ENST00000572438 NMIQ13287 307 aaPredicted RBP24.86■■□□□ 1.57
CHRNE-202ENST00000572438 KIAA1211Q6ZU35 1233 aa24.86■■□□□ 1.57
CHRNE-202ENST00000572438 CDC5LQ99459 802 aaKnown RBP24.86■■□□□ 1.57
CHRNE-202ENST00000572438 LSG1Q9H089 658 aaKnown RBP24.86■■□□□ 1.57
CHRNE-202ENST00000572438 TTC39AQ5SRH9 613 aa24.86■■□□□ 1.57
CHRNE-202ENST00000572438 CARMIL3Q8ND23 1372 aa24.85■■□□□ 1.57
CHRNE-202ENST00000572438 PUM3Q15397 648 aaKnown RBP24.85■■□□□ 1.57
CHRNE-202ENST00000572438 FAM227BQ96M60 508 aa24.85■■□□□ 1.57
CHRNE-202ENST00000572438 SNRKQ9NRH2 765 aa24.85■■□□□ 1.57
CHRNE-202ENST00000572438 PAG1Q9NWQ8 432 aa24.85■■□□□ 1.57
CHRNE-202ENST00000572438 APBA3O96018 575 aa24.84■■□□□ 1.57
CHRNE-202ENST00000572438 ANAPC15P60006 121 aa24.84■■□□□ 1.57
CHRNE-202ENST00000572438 DDX46Q7L014 1031 aaKnown RBP24.84■■□□□ 1.57
CHRNE-202ENST00000572438 TICAM2Q86XR7 235 aa24.84■■□□□ 1.57
CHRNE-202ENST00000572438 NFIXQ14938 502 aa24.84■■□□□ 1.57
CHRNE-202ENST00000572438 KBTBD3Q8NAB2 608 aa24.84■■□□□ 1.57
CHRNE-202ENST00000572438 GOLIM4O00461 696 aa24.83■■□□□ 1.57
CHRNE-202ENST00000572438 FGFR2P21802 821 aa24.83■■□□□ 1.57
CHRNE-202ENST00000572438 NLRP3Q96P20 1036 aa24.83■■□□□ 1.57
CHRNE-202ENST00000572438 A0A0D9SFI3 127 aa24.82■■□□□ 1.56
CHRNE-202ENST00000572438 HSPA4P34932 840 aa24.82■■□□□ 1.56
CHRNE-202ENST00000572438 LPIN2Q92539 896 aa24.82■■□□□ 1.56
CHRNE-202ENST00000572438 IL17RAQ96F46 866 aa24.82■■□□□ 1.56
CHRNE-202ENST00000572438 GYS1P13807 737 aa24.82■■□□□ 1.56
CHRNE-202ENST00000572438 ANKRD18AQ8IVF6 992 aa24.82■■□□□ 1.56
CHRNE-202ENST00000572438 HELBQ8NG08 1087 aaPredicted RBP24.82■■□□□ 1.56
CHRNE-202ENST00000572438 ZNF512BQ96KM6 892 aaPredicted RBP24.81■■□□□ 1.56
CHRNE-202ENST00000572438 PALD1Q9ULE6 856 aa24.81■■□□□ 1.56
CHRNE-202ENST00000572438 SPEF2Q9C093 1822 aa24.8■■□□□ 1.56
CHRNE-202ENST00000572438 MED23Q9ULK4 1368 aa24.8■■□□□ 1.56
CHRNE-202ENST00000572438 SLC5A1P13866 664 aa24.79■■□□□ 1.56
CHRNE-202ENST00000572438 CD2BP2O95400 341 aaKnown RBP24.79■■□□□ 1.56
CHRNE-202ENST00000572438 CCDC171Q6TFL3 1326 aa24.79■■□□□ 1.56
CHRNE-202ENST00000572438 COL4A1P02462 1669 aa24.78■■□□□ 1.56
CHRNE-202ENST00000572438 NPHP1O15259 732 aa24.78■■□□□ 1.56
CHRNE-202ENST00000572438 FKBP4Q02790 459 aaKnown RBP eCLIP24.78■■□□□ 1.56
CHRNE-202ENST00000572438 PTH1RQ03431 593 aa24.78■■□□□ 1.56
CHRNE-202ENST00000572438 CHRNDQ07001 517 aa24.78■■□□□ 1.56
CHRNE-202ENST00000572438 BSDC1Q9NW68 430 aaPredicted RBP24.78■■□□□ 1.56
CHRNE-202ENST00000572438 TAF5LO75529 589 aa24.77■■□□□ 1.56
CHRNE-202ENST00000572438 SCARF1Q14162 830 aa24.77■■□□□ 1.56
CHRNE-202ENST00000572438 CCDC24Q8N4L8 307 aa24.77■■□□□ 1.56
CHRNE-202ENST00000572438 CNBD1Q8NA66 436 aa24.77■■□□□ 1.56
CHRNE-202ENST00000572438 AKT1S1Q96B36 256 aa24.77■■□□□ 1.56
CHRNE-202ENST00000572438 K7ELQ4 463 aaPredicted RBP24.76■■□□□ 1.55
CHRNE-202ENST00000572438 ST18O60284 1047 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 ZNF827Q17R98 1081 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 CCDC102BQ68D86 513 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 CELF1Q92879 486 aaKnown RBP24.76■■□□□ 1.55
CHRNE-202ENST00000572438 ANTXR1Q9H6X2 564 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 TFCP2L1Q9NZI6 479 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 CASZ1Q86V15 1759 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 ARAP2Q8WZ64 1704 aa24.76■■□□□ 1.55
CHRNE-202ENST00000572438 UQCRFS1P1P0C7P4 283 aa24.75■■□□□ 1.55
CHRNE-202ENST00000572438 ARID4AP29374 1257 aaPredicted RBP24.75■■□□□ 1.55
CHRNE-202ENST00000572438 TM4SF1P30408 202 aa24.75■■□□□ 1.55
CHRNE-202ENST00000572438 MCAMP43121 646 aa24.75■■□□□ 1.55
CHRNE-202ENST00000572438 ZAP70P43403 619 aa24.75■■□□□ 1.55
CHRNE-202ENST00000572438 ILDR2Q71H61 639 aa24.75■■□□□ 1.55
CHRNE-202ENST00000572438 MAP4K1Q92918 833 aa24.75■■□□□ 1.55
CHRNE-202ENST00000572438 PHKA1P46020 1223 aa24.74■■□□□ 1.55
CHRNE-202ENST00000572438 RPS8P62241 208 aaKnown RBP24.74■■□□□ 1.55
CHRNE-202ENST00000572438 LRRFIP1Q32MZ4 808 aaKnown RBP24.74■■□□□ 1.55
CHRNE-202ENST00000572438 MCMDC2Q4G0Z9 681 aa24.74■■□□□ 1.55
CHRNE-202ENST00000572438 PRR5LQ6MZQ0 368 aa24.74■■□□□ 1.55
CHRNE-202ENST00000572438 ZNF589Q86UQ0 364 aaPredicted RBP24.74■■□□□ 1.55
CHRNE-202ENST00000572438 TNS1Q9HBL0 1735 aaKnown RBP24.73■■□□□ 1.55
CHRNE-202ENST00000572438 CHGBP05060 677 aa24.73■■□□□ 1.55
CHRNE-202ENST00000572438 HELLSQ9NRZ9 838 aa24.73■■□□□ 1.55
CHRNE-202ENST00000572438 SNX14Q9Y5W7 946 aa24.73■■□□□ 1.55
CHRNE-202ENST00000572438 SNAP23O00161 211 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 RNF113AO15541 343 aaKnown RBP24.72■■□□□ 1.55
CHRNE-202ENST00000572438 ZMYM1Q5SVZ6 1142 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 PI16Q6UXB8 463 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 SLKQ9H2G2 1235 aaPredicted RBP24.72■■□□□ 1.55
CHRNE-202ENST00000572438 MINPP1Q9UNW1 487 aa24.72■■□□□ 1.55
CHRNE-202ENST00000572438 TNRC6CQ9HCJ0 1690 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms