RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 XAGE2Q96GT9 111 aa23.5■■□□□ 1.35
RPAIN-210ENST00000571613 RIC1Q4ADV7 1423 aa23.5■■□□□ 1.35
RPAIN-210ENST00000571613 LRP5O75197 1615 aa23.5■■□□□ 1.35
RPAIN-210ENST00000571613 DDX60Q8IY21 1712 aaKnown RBP23.5■■□□□ 1.35
RPAIN-210ENST00000571613 IFIT1P09914 478 aaKnown RBP23.49■■□□□ 1.35
RPAIN-210ENST00000571613 ERFEQ4G0M1 354 aa23.49■■□□□ 1.35
RPAIN-210ENST00000571613 BICDL1Q6ZP65 573 aa23.49■■□□□ 1.35
RPAIN-210ENST00000571613 IL17RAQ96F46 866 aa23.49■■□□□ 1.35
RPAIN-210ENST00000571613 SNRKQ9NRH2 765 aa23.49■■□□□ 1.35
RPAIN-210ENST00000571613 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
RPAIN-210ENST00000571613 VGLL2Q8N8G2 317 aa23.48■■□□□ 1.35
RPAIN-210ENST00000571613 ZNF512BQ96KM6 892 aaPredicted RBP23.48■■□□□ 1.35
RPAIN-210ENST00000571613 PUM3Q15397 648 aaKnown RBP23.48■■□□□ 1.35
RPAIN-210ENST00000571613 KBTBD3Q8NAB2 608 aa23.48■■□□□ 1.35
RPAIN-210ENST00000571613 NLRP3Q96P20 1036 aa23.48■■□□□ 1.35
RPAIN-210ENST00000571613 DNAJC2Q99543 621 aaKnown RBP23.48■■□□□ 1.35
RPAIN-210ENST00000571613 ST18O60284 1047 aa23.47■■□□□ 1.35
RPAIN-210ENST00000571613 TXNRD1Q16881 649 aa23.47■■□□□ 1.35
RPAIN-210ENST00000571613 LPIN2Q92539 896 aa23.47■■□□□ 1.35
RPAIN-210ENST00000571613 PAG1Q9NWQ8 432 aa23.47■■□□□ 1.35
RPAIN-210ENST00000571613 COL24A1Q17RW2 1714 aa23.46■■□□□ 1.35
RPAIN-210ENST00000571613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.46■■□□□ 1.35
RPAIN-210ENST00000571613 PHF14O94880 888 aa23.46■■□□□ 1.35
RPAIN-210ENST00000571613 LSG1Q9H089 658 aaKnown RBP23.46■■□□□ 1.35
RPAIN-210ENST00000571613 SPEF2Q9C093 1822 aa23.46■■□□□ 1.35
RPAIN-210ENST00000571613 CARMIL3Q8ND23 1372 aa23.45■■□□□ 1.35
RPAIN-210ENST00000571613 HSPA4P34932 840 aa23.45■■□□□ 1.34
RPAIN-210ENST00000571613 SLC5A1P13866 664 aa23.44■■□□□ 1.34
RPAIN-210ENST00000571613 NMIQ13287 307 aaPredicted RBP23.44■■□□□ 1.34
RPAIN-210ENST00000571613 ANKRD18AQ8IVF6 992 aa23.44■■□□□ 1.34
RPAIN-210ENST00000571613 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
RPAIN-210ENST00000571613 FBXO41Q8TF61 875 aa23.44■■□□□ 1.34
RPAIN-210ENST00000571613 UQCRFS1P1P0C7P4 283 aa23.43■■□□□ 1.34
RPAIN-210ENST00000571613 SMIM5Q71RC9 77 aa23.43■■□□□ 1.34
RPAIN-210ENST00000571613 AMIGO3Q86WK7 504 aa23.43■■□□□ 1.34
RPAIN-210ENST00000571613 IL25Q9H293 177 aa23.43■■□□□ 1.34
RPAIN-210ENST00000571613 C4AP0C0L4 1744 aa23.43■■□□□ 1.34
RPAIN-210ENST00000571613 K7ELQ4 463 aaPredicted RBP23.42■■□□□ 1.34
RPAIN-210ENST00000571613 NPHP1O15259 732 aa23.42■■□□□ 1.34
RPAIN-210ENST00000571613 FGFR2P21802 821 aa23.42■■□□□ 1.34
RPAIN-210ENST00000571613 MCM2P49736 904 aa23.42■■□□□ 1.34
RPAIN-210ENST00000571613 GOLIM4O00461 696 aa23.41■■□□□ 1.34
RPAIN-210ENST00000571613 ADORA1P30542 326 aa23.41■■□□□ 1.34
RPAIN-210ENST00000571613 BSDC1Q9NW68 430 aaPredicted RBP23.41■■□□□ 1.34
RPAIN-210ENST00000571613 UBR3Q6ZT12 1888 aa23.41■■□□□ 1.34
RPAIN-210ENST00000571613 CCDC171Q6TFL3 1326 aa23.41■■□□□ 1.34
RPAIN-210ENST00000571613 APBA3O96018 575 aa23.41■■□□□ 1.34
RPAIN-210ENST00000571613 DDX46Q7L014 1031 aaKnown RBP23.41■■□□□ 1.34
RPAIN-210ENST00000571613 FAM227BQ96M60 508 aa23.41■■□□□ 1.34
RPAIN-210ENST00000571613 ZFYP08048 801 aaPredicted RBP23.4■■□□□ 1.34
RPAIN-210ENST00000571613 NFIXQ14938 502 aa23.4■■□□□ 1.34
RPAIN-210ENST00000571613 FLAD1Q8NFF5 587 aa23.4■■□□□ 1.34
RPAIN-210ENST00000571613 EDC3Q96F86 508 aaKnown RBP23.4■■□□□ 1.34
RPAIN-210ENST00000571613 HELLSQ9NRZ9 838 aa23.4■■□□□ 1.34
RPAIN-210ENST00000571613 MED23Q9ULK4 1368 aa23.4■■□□□ 1.34
RPAIN-210ENST00000571613 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.34
RPAIN-210ENST00000571613 MCMDC2Q4G0Z9 681 aa23.39■■□□□ 1.34
RPAIN-210ENST00000571613 PROM2Q8N271 834 aa23.39■■□□□ 1.34
RPAIN-210ENST00000571613 A0A0D9SFI3 127 aa23.38■■□□□ 1.33
RPAIN-210ENST00000571613 MAP4K1Q92918 833 aa23.38■■□□□ 1.33
RPAIN-210ENST00000571613 GYS1P13807 737 aa23.38■■□□□ 1.33
RPAIN-210ENST00000571613 ARID4AP29374 1257 aaPredicted RBP23.38■■□□□ 1.33
RPAIN-210ENST00000571613 FKBP4Q02790 459 aaKnown RBP eCLIP23.38■■□□□ 1.33
RPAIN-210ENST00000571613 CHRNDQ07001 517 aa23.38■■□□□ 1.33
RPAIN-210ENST00000571613 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
RPAIN-210ENST00000571613 CNBD1Q8NA66 436 aa23.38■■□□□ 1.33
RPAIN-210ENST00000571613 ZKSCAN1P17029 563 aaPredicted RBP23.37■■□□□ 1.33
RPAIN-210ENST00000571613 ZSCAN25Q6NSZ9 544 aa23.37■■□□□ 1.33
RPAIN-210ENST00000571613 KCNB2Q92953 911 aa23.37■■□□□ 1.33
RPAIN-210ENST00000571613 RNF113AO15541 343 aaKnown RBP23.36■■□□□ 1.33
RPAIN-210ENST00000571613 KCNJ4P48050 445 aa23.36■■□□□ 1.33
RPAIN-210ENST00000571613 RPS8P62241 208 aaKnown RBP23.36■■□□□ 1.33
RPAIN-210ENST00000571613 CCDC102BQ68D86 513 aa23.36■■□□□ 1.33
RPAIN-210ENST00000571613 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.36■■□□□ 1.33
RPAIN-210ENST00000571613 UBE4AQ14139 1066 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 C3orf67Q6ZVT6 689 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 PALD1Q9ULE6 856 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 NDUFB9Q9Y6M9 179 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 HSP90AA1P07900 732 aaKnown RBP23.35■■□□□ 1.33
RPAIN-210ENST00000571613 NEK4P51957 841 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 ST5P78524 1137 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 PTH1RQ03431 593 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 ZMYM1Q5SVZ6 1142 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 HELBQ8NG08 1087 aaPredicted RBP23.35■■□□□ 1.33
RPAIN-210ENST00000571613 ANP32EQ9BTT0 268 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 HMG20BQ9P0W2 317 aa23.35■■□□□ 1.33
RPAIN-210ENST00000571613 TM4SF1P30408 202 aa23.34■■□□□ 1.33
RPAIN-210ENST00000571613 NECTIN1Q15223 517 aa23.34■■□□□ 1.33
RPAIN-210ENST00000571613 ANKRD2Q9GZV1 360 aa23.34■■□□□ 1.33
RPAIN-210ENST00000571613 TFCP2L1Q9NZI6 479 aa23.34■■□□□ 1.33
RPAIN-210ENST00000571613 RGS17Q9UGC6 210 aaPredicted RBP23.34■■□□□ 1.33
RPAIN-210ENST00000571613 SNX14Q9Y5W7 946 aa23.34■■□□□ 1.33
RPAIN-210ENST00000571613 ARAP2Q8WZ64 1704 aa23.34■■□□□ 1.33
RPAIN-210ENST00000571613 TAF5LO75529 589 aa23.33■■□□□ 1.33
RPAIN-210ENST00000571613 ZAP70P43403 619 aa23.33■■□□□ 1.33
RPAIN-210ENST00000571613 AKT1S1Q96B36 256 aa23.33■■□□□ 1.33
RPAIN-210ENST00000571613 TM6SF1Q9BZW5 370 aa23.33■■□□□ 1.33
RPAIN-210ENST00000571613 RBM8AQ9Y5S9 174 aaKnown RBP23.33■■□□□ 1.33
RPAIN-210ENST00000571613 MCAMP43121 646 aa23.32■■□□□ 1.32
RPAIN-210ENST00000571613 ANTXR1Q9H6X2 564 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms