RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 C11orf57Q6ZUT1 292 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-205ENST00000571272 CFAP45Q9UL16 551 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 GOLGA6L19H0YKK7 550 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 ARID5BQ14865 1188 aa20.56■□□□□ 0.88
SCARF1-205ENST00000571272 TPD52L1Q16890 204 aaPredicted RBP20.56■□□□□ 0.88
SCARF1-205ENST00000571272 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
SCARF1-205ENST00000571272 NAA30Q147X3 362 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-205ENST00000571272 ZNF790Q6PG37 636 aa20.55■□□□□ 0.88
SCARF1-205ENST00000571272 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-205ENST00000571272 ZNF609O15014 1411 aa20.55■□□□□ 0.88
SCARF1-205ENST00000571272 DMTNQ08495 405 aa20.55■□□□□ 0.88
SCARF1-205ENST00000571272 STOX1Q6ZVD7 989 aa20.55■□□□□ 0.88
SCARF1-205ENST00000571272 UBE3BQ7Z3V4 1068 aa20.55■□□□□ 0.88
SCARF1-205ENST00000571272 ZNF592Q92610 1267 aa20.55■□□□□ 0.88
SCARF1-205ENST00000571272 NAP1L2Q9ULW6 460 aaPredicted RBP20.55■□□□□ 0.88
SCARF1-205ENST00000571272 NCAPD2Q15021 1401 aa20.54■□□□□ 0.88
SCARF1-205ENST00000571272 NCBP1Q09161 790 aaKnown RBP20.54■□□□□ 0.88
SCARF1-205ENST00000571272 METTL22Q9BUU2 404 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-205ENST00000571272 ZSCAN16Q9H4T2 348 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-205ENST00000571272 U3KPZ7 1027 aaPredicted RBP20.54■□□□□ 0.88
SCARF1-205ENST00000571272 CCT2P78371 535 aaKnown RBP20.54■□□□□ 0.88
SCARF1-205ENST00000571272 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
SCARF1-205ENST00000571272 CCAR1Q8IX12 1150 aaKnown RBP20.54■□□□□ 0.88
SCARF1-205ENST00000571272 COPRSQ9NQ92 184 aa20.54■□□□□ 0.88
SCARF1-205ENST00000571272 IQCB1Q15051 598 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 ERCC4Q92889 916 aaPredicted RBP20.53■□□□□ 0.88
SCARF1-205ENST00000571272 FBXW7Q969H0 707 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 ORAI2Q96SN7 254 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 ATP5J2-PTCD1G3V325 749 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 PTCD1O75127 700 aaKnown RBP20.53■□□□□ 0.88
SCARF1-205ENST00000571272 APOBRQ0VD83 1088 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 NFATC2IPQ8NCF5 419 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 GOLPH3LQ9H4A5 285 aa20.53■□□□□ 0.88
SCARF1-205ENST00000571272 ADD1P35611 737 aaKnown RBP20.52■□□□□ 0.88
SCARF1-205ENST00000571272 RFX5P48382 616 aaPredicted RBP20.52■□□□□ 0.88
SCARF1-205ENST00000571272 GUCY1B3Q02153 619 aa20.52■□□□□ 0.88
SCARF1-205ENST00000571272 ANKRD13DQ6ZTN6 518 aa20.52■□□□□ 0.88
SCARF1-205ENST00000571272 SMTNL1A8MU46 457 aa20.52■□□□□ 0.88
SCARF1-205ENST00000571272 NSUN7Q8NE18 718 aaKnown RBP20.52■□□□□ 0.87
SCARF1-205ENST00000571272 NCOA5Q9HCD5 579 aaKnown RBP20.52■□□□□ 0.87
SCARF1-205ENST00000571272 USP28Q96RU2 1077 aa20.51■□□□□ 0.87
SCARF1-205ENST00000571272 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
SCARF1-205ENST00000571272 A0A0G2JLW4 131 aa20.51■□□□□ 0.87
SCARF1-205ENST00000571272 CTDNEP1O95476 244 aa20.51■□□□□ 0.87
SCARF1-205ENST00000571272 FILIP1Q7Z7B0 1213 aa20.51■□□□□ 0.87
SCARF1-205ENST00000571272 SMARCC2Q8TAQ2 1214 aa20.51■□□□□ 0.87
SCARF1-205ENST00000571272 ZNF496Q96IT1 587 aaPredicted RBP20.51■□□□□ 0.87
SCARF1-205ENST00000571272 PTPDC1A2A3K4 754 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 USP27XA6NNY8 438 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 BECN2A8MW95 431 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 LRRC8AQ8IWT6 810 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 CCDC112Q8NEF3 446 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 PFKFB2O60825 505 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 CHST3Q7LGC8 479 aa20.5■□□□□ 0.87
SCARF1-205ENST00000571272 NEUROD6Q96NK8 337 aa20.49■□□□□ 0.87
SCARF1-205ENST00000571272 HAUS7Q99871 368 aa20.49■□□□□ 0.87
SCARF1-205ENST00000571272 RCOR1Q9UKL0 485 aa20.49■□□□□ 0.87
SCARF1-205ENST00000571272 STX1AQ16623 288 aa20.49■□□□□ 0.87
SCARF1-205ENST00000571272 CCDC73Q6ZRK6 1079 aa20.49■□□□□ 0.87
SCARF1-205ENST00000571272 DHX32Q7L7V1 743 aaKnown RBP20.49■□□□□ 0.87
SCARF1-205ENST00000571272 A0A087WZG4 1122 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 GOLIM4O00461 696 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 IGSF3O75054 1194 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 CAVIN2O95810 425 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 SNW1Q13573 536 aaKnown RBP20.48■□□□□ 0.87
SCARF1-205ENST00000571272 KINO60870 393 aaKnown RBP20.48■□□□□ 0.87
SCARF1-205ENST00000571272 ME1P48163 572 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 ZC3H6P61129 1189 aaKnown RBP20.48■□□□□ 0.87
SCARF1-205ENST00000571272 UTP14CQ5TAP6 766 aaKnown RBP20.48■□□□□ 0.87
SCARF1-205ENST00000571272 SLC52A2Q9HAB3 445 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 OVOS2A0A0G2JMS6 1433 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 CEP135Q66GS9 1140 aa20.48■□□□□ 0.87
SCARF1-205ENST00000571272 CDC25BP30305 580 aa20.47■□□□□ 0.87
SCARF1-205ENST00000571272 KBTBD3Q8NAB2 608 aa20.47■□□□□ 0.87
SCARF1-205ENST00000571272 PAXBP1Q9Y5B6 917 aa20.47■□□□□ 0.87
SCARF1-205ENST00000571272 SKILP12757 684 aa20.47■□□□□ 0.87
SCARF1-205ENST00000571272 NAA16Q6N069 864 aaPredicted RBP20.47■□□□□ 0.87
SCARF1-205ENST00000571272 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
SCARF1-205ENST00000571272 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
SCARF1-205ENST00000571272 TRMT1Q9NXH9 659 aaKnown RBP20.47■□□□□ 0.87
SCARF1-205ENST00000571272 MRC1P22897 1456 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 SARM1Q6SZW1 724 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 CTAGE5O15320 804 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 LMBR1LQ6UX01 489 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 DHX40Q8IX18 779 aaKnown RBP20.46■□□□□ 0.87
SCARF1-205ENST00000571272 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 MRFAP1L1Q96HT8 127 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
SCARF1-205ENST00000571272 TIMM10P62072 90 aa20.45■□□□□ 0.86
SCARF1-205ENST00000571272 CCDC69A6NI79 296 aa20.45■□□□□ 0.86
SCARF1-205ENST00000571272 HMGB1P09429 215 aaKnown RBP20.44■□□□□ 0.86
SCARF1-205ENST00000571272 RABL6Q3YEC7 729 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-205ENST00000571272 AOPEPQ8N6M6 819 aa20.44■□□□□ 0.86
SCARF1-205ENST00000571272 FAM160A1Q05DH4 1040 aa20.44■□□□□ 0.86
SCARF1-205ENST00000571272 ENGASEQ8NFI3 743 aa20.44■□□□□ 0.86
SCARF1-205ENST00000571272 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.44■□□□□ 0.86
SCARF1-205ENST00000571272 V9GYY5 206 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-205ENST00000571272 LRP10Q7Z4F1 713 aa20.44■□□□□ 0.86
SCARF1-205ENST00000571272 ILDR1Q86SU0 546 aaPredicted RBP20.44■□□□□ 0.86
SCARF1-205ENST00000571272 ZNF396Q96N95 335 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms