RNA–Protein interactions for RNA: ENST00000570625.5

EIF4A3-202, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-202ENST00000570625 TTC9Q92623 222 aa8.59□□□□□ -1.03
EIF4A3-202ENST00000570625 CALR3Q96L12 384 aaKnown RBP8.59□□□□□ -1.03
EIF4A3-202ENST00000570625 UBL7Q96S82 380 aaPredicted RBP8.59□□□□□ -1.03
EIF4A3-202ENST00000570625 USP17L3A6NCW0 530 aa8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 USP17L4A6NCW7 530 aa8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 NFIAQ12857 509 aa8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 USP17L2Q6R6M4 530 aa8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 USP17L1Q7RTZ2 530 aa8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 SMG9Q9H0W8 520 aaKnown RBP8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 TSPAN10Q9H1Z9 355 aaPredicted RBP8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
EIF4A3-202ENST00000570625 PRR19A6NJB7 356 aa8.57□□□□□ -1.04
EIF4A3-202ENST00000570625 HIRAP54198 1017 aaPredicted RBP8.57□□□□□ -1.04
EIF4A3-202ENST00000570625 Q6ZS46 218 aa8.57□□□□□ -1.04
EIF4A3-202ENST00000570625 KIAA1024Q9UPX6 916 aa8.57□□□□□ -1.04
EIF4A3-202ENST00000570625 DHX15O43143 795 aaKnown RBP8.56□□□□□ -1.04
EIF4A3-202ENST00000570625 CLDN10P78369 228 aa8.56□□□□□ -1.04
EIF4A3-202ENST00000570625 HFE2Q6ZVN8 426 aa8.56□□□□□ -1.04
EIF4A3-202ENST00000570625 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
EIF4A3-202ENST00000570625 DHX32Q7L7V1 743 aaKnown RBP8.55□□□□□ -1.04
EIF4A3-202ENST00000570625 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
EIF4A3-202ENST00000570625 ALDH16A1Q8IZ83 802 aa8.55□□□□□ -1.04
EIF4A3-202ENST00000570625 TRPM4Q8TD43 1214 aa8.55□□□□□ -1.04
EIF4A3-202ENST00000570625 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
EIF4A3-202ENST00000570625 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 PIP4K2BP78356 416 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 CCDC102BQ68D86 513 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 KRT25Q7Z3Z0 450 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 ARMC10Q8N2F6 343 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 OGFOD1Q8N543 542 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 ZFATQ9P243 1243 aa8.54□□□□□ -1.04
EIF4A3-202ENST00000570625 MAP3K6O95382 1288 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 TRIM50Q86XT4 487 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 TRIM42Q8IWZ5 723 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 ABI1Q8IZP0 508 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 POU5F2Q8N7G0 328 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 CHMP7Q8WUX9 453 aaPredicted RBP8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 ZNF594Q96JF6 807 aaPredicted RBP8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 PPP1R12CQ9BZL4 782 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 GTF3C3Q9Y5Q9 886 aa8.53□□□□□ -1.04
EIF4A3-202ENST00000570625 HMX2A2RU54 273 aa8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 TARSP26639 723 aaKnown RBP8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 LMOD1P29536 600 aaPredicted RBP8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 RNF43Q68DV7 783 aa8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 IL22RA1Q8N6P7 574 aa8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 C7orf69Q9H7B7 122 aa8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 MAFBQ9Y5Q3 323 aaPredicted RBP8.52□□□□□ -1.05
EIF4A3-202ENST00000570625 MADDQ8WXG6 1647 aa8.51□□□□□ -1.05
EIF4A3-202ENST00000570625 RASA1P20936 1047 aa8.51□□□□□ -1.05
EIF4A3-202ENST00000570625 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
EIF4A3-202ENST00000570625 SETDB1Q15047 1291 aa8.51□□□□□ -1.05
EIF4A3-202ENST00000570625 HIF1AQ16665 826 aa8.51□□□□□ -1.05
EIF4A3-202ENST00000570625 GDF6Q6KF10 455 aaPredicted RBP8.51□□□□□ -1.05
EIF4A3-202ENST00000570625 LGR5O75473 907 aa8.5□□□□□ -1.05
EIF4A3-202ENST00000570625 CDCA8Q53HL2 280 aa8.5□□□□□ -1.05
EIF4A3-202ENST00000570625 NGLY1Q96IV0 654 aa8.5□□□□□ -1.05
EIF4A3-202ENST00000570625 DBNDD2Q9BQY9 259 aa8.5□□□□□ -1.05
EIF4A3-202ENST00000570625 PPP1R12BO60237 982 aaPredicted RBP8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 EIF2AK2P19525 551 aaKnown RBP8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 GRNP28799 593 aaKnown RBP8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 GPLD1P80108 840 aa8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 ASIC4Q96FT7 647 aa8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 IFT43Q96FT9 208 aa8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 ZMYND15Q9H091 742 aa8.49□□□□□ -1.05
EIF4A3-202ENST00000570625 DKK1O94907 266 aa8.48□□□□□ -1.05
EIF4A3-202ENST00000570625 RFX1P22670 979 aa8.48□□□□□ -1.05
EIF4A3-202ENST00000570625 KANK4Q5T7N3 995 aaPredicted RBP8.48□□□□□ -1.05
EIF4A3-202ENST00000570625 TSEN2Q8NCE0 465 aaKnown RBP8.48□□□□□ -1.05
EIF4A3-202ENST00000570625 SASH3O75995 380 aa8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 RARAP10276 462 aa8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 FBLN7Q53RD9 439 aa8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 GAS2L2Q8NHY3 880 aa8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 SHKBP1Q8TBC3 707 aa8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 UTP4Q969X6 686 aaKnown RBP8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 VRTNQ9H8Y1 702 aa8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 SRA1Q9HD15 236 aaKnown RBP8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
EIF4A3-202ENST00000570625 HOXA10P31260 410 aaPredicted RBP8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 CRTC2Q53ET0 693 aaPredicted RBP8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 IER5Q5VY09 327 aa8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 LARP1Q6PKG0 1096 aaKnown RBP8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 DCAF11Q8TEB1 546 aa8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 PLD4Q96BZ4 506 aa8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 CEP41Q9BYV8 373 aa8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 RBM19Q9Y4C8 960 aaKnown RBP8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 CFAP43Q8NDM7 1665 aa8.46□□□□□ -1.06
EIF4A3-202ENST00000570625 J3QW42 95 aa8.45□□□□□ -1.06
EIF4A3-202ENST00000570625 C21orf2O43822 256 aa8.45□□□□□ -1.06
EIF4A3-202ENST00000570625 EPB42P16452 691 aa8.45□□□□□ -1.06
EIF4A3-202ENST00000570625 MAP4K3Q8IVH8 894 aa8.45□□□□□ -1.06
EIF4A3-202ENST00000570625 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
EIF4A3-202ENST00000570625 TGFBR3LH3BV60 316 aa8.44□□□□□ -1.06
EIF4A3-202ENST00000570625 CFAP70Q5T0N1 1121 aa8.44□□□□□ -1.06
EIF4A3-202ENST00000570625 SIX5Q8N196 739 aa8.44□□□□□ -1.06
EIF4A3-202ENST00000570625 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms