RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SRGNP10124 158 aa18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 AACSQ86V21 672 aa18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 C16orf71Q8IYS4 520 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 OTUD7AQ8TE49 926 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 CRAMP1Q96RY5 1269 aa18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 BSDC1Q9NW68 430 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 ZNF609O15014 1411 aa18.97■□□□□ 0.63
HERPUD1-219ENST00000570273 H0YIN7 160 aa18.96■□□□□ 0.63
HERPUD1-219ENST00000570273 IFIT2P09913 472 aaKnown RBP18.96■□□□□ 0.63
HERPUD1-219ENST00000570273 TNNI3KQ59H18 835 aa18.96■□□□□ 0.63
HERPUD1-219ENST00000570273 MASTLQ96GX5 879 aa18.96■□□□□ 0.63
HERPUD1-219ENST00000570273 FPGT-TNNI3KV9GXZ4 949 aa18.96■□□□□ 0.63
HERPUD1-219ENST00000570273 GPR108Q9NPR9 543 aa18.95■□□□□ 0.62
HERPUD1-219ENST00000570273 CHRNA5P30532 468 aa18.94■□□□□ 0.62
HERPUD1-219ENST00000570273 CHRNDQ07001 517 aa18.94■□□□□ 0.62
HERPUD1-219ENST00000570273 HELBQ8NG08 1087 aaPredicted RBP18.94■□□□□ 0.62
HERPUD1-219ENST00000570273 ZNF622Q969S3 477 aaKnown RBP eCLIP18.94■□□□□ 0.622e-6■■□□□ 11.7
HERPUD1-219ENST00000570273 EAF2Q96CJ1 260 aaPredicted RBP18.94■□□□□ 0.62
HERPUD1-219ENST00000570273 AKAP2Q9Y2D5 859 aa18.94■□□□□ 0.62
HERPUD1-219ENST00000570273 TAF1P21675 1872 aa18.94■□□□□ 0.62
HERPUD1-219ENST00000570273 MX1P20591 662 aa18.93■□□□□ 0.62
HERPUD1-219ENST00000570273 ATP2B3Q16720 1220 aa18.93■□□□□ 0.62
HERPUD1-219ENST00000570273 STYK1Q6J9G0 422 aa18.93■□□□□ 0.62
HERPUD1-219ENST00000570273 PLEKHM2Q8IWE5 1019 aa18.93■□□□□ 0.62
HERPUD1-219ENST00000570273 VGLL2Q8N8G2 317 aa18.93■□□□□ 0.62
HERPUD1-219ENST00000570273 CCDC8Q9H0W5 538 aaPredicted RBP18.93■□□□□ 0.62
HERPUD1-219ENST00000570273 SALL3Q9BXA9 1300 aa18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 PPEF1O14829 653 aaPredicted RBP18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 BBOX1O75936 387 aa18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 ALDH1B1P30837 517 aa18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 GPATCH3Q96I76 525 aa18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 TLR7Q9NYK1 1049 aaKnown RBP18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 MINPP1Q9UNW1 487 aa18.92■□□□□ 0.62
HERPUD1-219ENST00000570273 A0A1B0GUL7 405 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 TAF5LO75529 589 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 PDE8BO95263 885 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 PUM3Q15397 648 aaKnown RBP18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 TMC4Q7Z404 712 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 NEUROD6Q96NK8 337 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 PDE1AP54750 535 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 ANKRD2Q9GZV1 360 aa18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 PPP1R1BQ9UD71 204 aaPredicted RBP18.91■□□□□ 0.62
HERPUD1-219ENST00000570273 KIF13BQ9NQT8 1826 aa18.9■□□□□ 0.62
HERPUD1-219ENST00000570273 SLC5A1P13866 664 aa18.9■□□□□ 0.62
HERPUD1-219ENST00000570273 TSHZ3Q63HK5 1081 aa18.9■□□□□ 0.62
HERPUD1-219ENST00000570273 CNKSR1Q969H4 720 aa18.9■□□□□ 0.62
HERPUD1-219ENST00000570273 DBNDD2Q9BQY9 259 aa18.9■□□□□ 0.62
HERPUD1-219ENST00000570273 DBNLQ9UJU6 430 aaKnown RBP18.9■□□□□ 0.62
HERPUD1-219ENST00000570273 AOX1Q06278 1338 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 DPEP1P16444 411 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 KCNJ4P48050 445 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 TIMM10P62072 90 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 SLC51AQ86UW1 340 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 PELP1Q8IZL8 1130 aaKnown RBP18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 LPIN2Q92539 896 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 STAP2Q9UGK3 403 aa18.89■□□□□ 0.61
HERPUD1-219ENST00000570273 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 TTC41PQ6P2S7 1318 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 LRRC37AA6NMS7 1700 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 FGFR2P21802 821 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 ADORA1P30542 326 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 TGFB2P61812 414 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 PRPF40BQ6NWY9 871 aaKnown RBP18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 ECHDC1Q9NTX5 307 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 ANKIB1Q9P2G1 1089 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 CD2APQ9Y5K6 639 aa18.88■□□□□ 0.61
HERPUD1-219ENST00000570273 XDHP47989 1333 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 A0A0G2JLW4 131 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 SNAP23O00161 211 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 IFIT1P09914 478 aaKnown RBP18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 GORABQ5T7V8 394 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 SP8Q8IXZ3 490 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 XAGE2Q96GT9 111 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 TMX4Q9H1E5 349 aaPredicted RBP18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 OSBPL3Q9H4L5 887 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 ATP6V0A2Q9Y487 856 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 DLEC1Q9Y238 1755 aa18.87■□□□□ 0.61
HERPUD1-219ENST00000570273 ERC2O15083 957 aa18.86■□□□□ 0.61
HERPUD1-219ENST00000570273 GPSM2P81274 684 aa18.86■□□□□ 0.61
HERPUD1-219ENST00000570273 UBE4AQ14139 1066 aa18.86■□□□□ 0.61
HERPUD1-219ENST00000570273 TTC22Q5TAA0 569 aa18.86■□□□□ 0.61
HERPUD1-219ENST00000570273 ARAP2Q8WZ64 1704 aa18.85■□□□□ 0.61
HERPUD1-219ENST00000570273 KIAA1551Q9HCM1 1747 aa18.85■□□□□ 0.61
HERPUD1-219ENST00000570273 GLRX3O76003 335 aaKnown RBP18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 PI4K2BQ8TCG2 481 aa18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 FHDC1Q9C0D6 1143 aaPredicted RBP18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 NSFL1CQ9UNZ2 370 aaKnown RBP18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 ZNF804BA4D1E1 1349 aa18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
HERPUD1-219ENST00000570273 UFL1O94874 794 aa18.83■□□□□ 0.61
HERPUD1-219ENST00000570273 GSPT1P15170 499 aaKnown RBP18.83■□□□□ 0.61
HERPUD1-219ENST00000570273 CCDC158Q5M9N0 1113 aa18.83■□□□□ 0.61
HERPUD1-219ENST00000570273 TTC39AQ5SRH9 613 aa18.83■□□□□ 0.61
HERPUD1-219ENST00000570273 GGA1Q9UJY5 639 aa18.83■□□□□ 0.61
HERPUD1-219ENST00000570273 LEMD3Q9Y2U8 911 aa18.83■□□□□ 0.61
HERPUD1-219ENST00000570273 KCNA3P22001 575 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms