RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 FKBP5Q13451 457 aaPredicted RBP28.81■■■□□ 2.2
RBFOX1-219ENST00000569895 CWF19L2Q2TBE0 894 aaKnown RBP28.81■■■□□ 2.2
RBFOX1-219ENST00000569895 RASSF10A6NK89 507 aa28.8■■■□□ 2.2
RBFOX1-219ENST00000569895 PSMD14O00487 310 aa28.8■■■□□ 2.2
RBFOX1-219ENST00000569895 ECE2O60344 883 aa28.8■■■□□ 2.2
RBFOX1-219ENST00000569895 UFL1O94874 794 aa28.8■■■□□ 2.2
RBFOX1-219ENST00000569895 MYH16Q9H6N6 1097 aa28.8■■■□□ 2.2
RBFOX1-219ENST00000569895 RPS12P25398 132 aaKnown RBP28.79■■■□□ 2.2
RBFOX1-219ENST00000569895 VEGFBP49765 207 aa28.79■■■□□ 2.2
RBFOX1-219ENST00000569895 DOK7Q18PE1 504 aa28.79■■■□□ 2.2
RBFOX1-219ENST00000569895 TTLL11Q8NHH1 800 aa28.79■■■□□ 2.2
RBFOX1-219ENST00000569895 H7C1W4 665 aa28.78■■■□□ 2.2
RBFOX1-219ENST00000569895 EXOSC9Q06265 439 aaKnown RBP28.78■■■□□ 2.2
RBFOX1-219ENST00000569895 COL13A1Q5TAT6 717 aaPredicted RBP28.78■■■□□ 2.2
RBFOX1-219ENST00000569895 MICALL2Q8IY33 904 aa28.78■■■□□ 2.2
RBFOX1-219ENST00000569895 DNAAF4Q8WXU2 420 aa28.78■■■□□ 2.2
RBFOX1-219ENST00000569895 PGAP2Q9UHJ9 254 aa28.78■■■□□ 2.2
RBFOX1-219ENST00000569895 XDHP47989 1333 aa28.77■■■□□ 2.2
RBFOX1-219ENST00000569895 ZBTB12Q9Y330 459 aaPredicted RBP28.77■■■□□ 2.2
RBFOX1-219ENST00000569895 ATP2B4P23634 1241 aa28.76■■■□□ 2.19
RBFOX1-219ENST00000569895 GCKRQ14397 625 aa28.76■■■□□ 2.19
RBFOX1-219ENST00000569895 UBE3BQ7Z3V4 1068 aa28.76■■■□□ 2.19
RBFOX1-219ENST00000569895 LINS1Q8NG48 757 aa28.75■■■□□ 2.19
RBFOX1-219ENST00000569895 GPR101Q96P66 508 aaPredicted RBP28.75■■■□□ 2.19
RBFOX1-219ENST00000569895 BSDC1Q9NW68 430 aaPredicted RBP28.75■■■□□ 2.19
RBFOX1-219ENST00000569895 TRAF5O00463 557 aa28.74■■■□□ 2.19
RBFOX1-219ENST00000569895 HIRAP54198 1017 aaPredicted RBP28.74■■■□□ 2.19
RBFOX1-219ENST00000569895 CDC37L1Q7L3B6 337 aa28.74■■■□□ 2.19
RBFOX1-219ENST00000569895 AIDAQ96BJ3 306 aa28.74■■■□□ 2.19
RBFOX1-219ENST00000569895 GREM2Q9H772 168 aa28.74■■■□□ 2.19
RBFOX1-219ENST00000569895 COL4A1P02462 1669 aa28.74■■■□□ 2.19
RBFOX1-219ENST00000569895 TRPM4Q8TD43 1214 aa28.73■■■□□ 2.19
RBFOX1-219ENST00000569895 PLA2G12BQ9BX93 195 aa28.73■■■□□ 2.19
RBFOX1-219ENST00000569895 RTL9Q8NET4 1388 aa28.73■■■□□ 2.19
RBFOX1-219ENST00000569895 VIL1P09327 827 aaKnown RBP28.72■■■□□ 2.19
RBFOX1-219ENST00000569895 IGHMBP2P38935 993 aaKnown RBP28.72■■■□□ 2.19
RBFOX1-219ENST00000569895 ECE1P42892 770 aa28.72■■■□□ 2.19
RBFOX1-219ENST00000569895 FMR1Q06787 632 aaKnown RBP eCLIP28.72■■■□□ 2.19
RBFOX1-219ENST00000569895 CST9Q5W186 159 aa28.72■■■□□ 2.19
RBFOX1-219ENST00000569895 KCNQ5Q9NR82 932 aa28.72■■■□□ 2.19
RBFOX1-219ENST00000569895 WDR33Q9C0J8 1336 aaKnown RBP28.71■■■□□ 2.19
RBFOX1-219ENST00000569895 GLIS2Q9BZE0 524 aaPredicted RBP28.71■■■□□ 2.19
RBFOX1-219ENST00000569895 MINPP1Q9UNW1 487 aa28.71■■■□□ 2.19
RBFOX1-219ENST00000569895 PAXIP1Q6ZW49 1069 aaPredicted RBP28.7■■■□□ 2.18
RBFOX1-219ENST00000569895 SAMD7Q7Z3H4 446 aa28.7■■■□□ 2.18
RBFOX1-219ENST00000569895 PCNTO95613 3336 aa28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 SHTN1A0MZ66 631 aa28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 CELF2O95319 508 aaKnown RBP28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 PODNQ7Z5L7 613 aa28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 TNS4Q8IZW8 715 aa28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 SPINK5Q9NQ38 1064 aaPredicted RBP28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 TLL2Q9Y6L7 1015 aa28.69■■■□□ 2.18
RBFOX1-219ENST00000569895 MAP2K1Q02750 393 aaPredicted RBP28.68■■■□□ 2.18
RBFOX1-219ENST00000569895 TBC1D10BQ4KMP7 808 aaPredicted RBP28.67■■■□□ 2.18
RBFOX1-219ENST00000569895 RBM26Q5T8P6 1007 aaKnown RBP28.67■■■□□ 2.18
RBFOX1-219ENST00000569895 AGBL3Q8NEM8 1001 aa28.67■■■□□ 2.18
RBFOX1-219ENST00000569895 MPHOSPH8Q99549 860 aa28.67■■■□□ 2.18
RBFOX1-219ENST00000569895 CSF1RP07333 972 aa28.66■■■□□ 2.18
RBFOX1-219ENST00000569895 ITGA6P23229 1130 aa28.66■■■□□ 2.18
RBFOX1-219ENST00000569895 CASP7P55210 303 aa28.66■■■□□ 2.18
RBFOX1-219ENST00000569895 DCPSQ96C86 337 aaKnown RBP28.66■■■□□ 2.18
RBFOX1-219ENST00000569895 CAPNS2Q96L46 248 aa28.66■■■□□ 2.18
RBFOX1-219ENST00000569895 WBP1LQ9NX94 342 aa28.66■■■□□ 2.18
RBFOX1-219ENST00000569895 FOXN1O15353 648 aa28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 CTCFP49711 727 aaPredicted RBP28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 CCT4P50991 539 aaKnown RBP28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 RSBN1LQ6PCB5 846 aaPredicted RBP28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 USP48Q86UV5 1035 aa28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 ANKRD2Q9GZV1 360 aa28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 ZNF408Q9H9D4 720 aa28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 LEMD3Q9Y2U8 911 aa28.65■■■□□ 2.18
RBFOX1-219ENST00000569895 USP17L3A6NCW0 530 aa28.64■■■□□ 2.18
RBFOX1-219ENST00000569895 USP17L4A6NCW7 530 aa28.64■■■□□ 2.18
RBFOX1-219ENST00000569895 USP17L1Q7RTZ2 530 aa28.64■■■□□ 2.18
RBFOX1-219ENST00000569895 CACNA1FO60840 1977 aa28.64■■■□□ 2.17
RBFOX1-219ENST00000569895 F6X3S4 739 aa28.63■■■□□ 2.17
RBFOX1-219ENST00000569895 KIF4BQ2VIQ3 1234 aa28.63■■■□□ 2.17
RBFOX1-219ENST00000569895 BEND3Q5T5X7 828 aa28.63■■■□□ 2.17
RBFOX1-219ENST00000569895 KRT26Q7Z3Y9 468 aa28.63■■■□□ 2.17
RBFOX1-219ENST00000569895 SAPCD2Q86UD0 394 aa28.63■■■□□ 2.17
RBFOX1-219ENST00000569895 HHIPL1Q96JK4 782 aa28.63■■■□□ 2.17
RBFOX1-219ENST00000569895 MED23Q9ULK4 1368 aa28.62■■■□□ 2.17
RBFOX1-219ENST00000569895 ANKRD18BA2A2Z9 1011 aa28.62■■■□□ 2.17
RBFOX1-219ENST00000569895 GRM1Q13255 1194 aa28.62■■■□□ 2.17
RBFOX1-219ENST00000569895 FAM161AQ3B820 660 aa28.62■■■□□ 2.17
RBFOX1-219ENST00000569895 CYP4F22Q6NT55 531 aa28.62■■■□□ 2.17
RBFOX1-219ENST00000569895 PRDM10Q9NQV6 1147 aa28.62■■■□□ 2.17
RBFOX1-219ENST00000569895 BEGAINQ9BUH8 593 aa28.61■■■□□ 2.17
RBFOX1-219ENST00000569895 TRPM7Q96QT4 1865 aa28.6■■■□□ 2.17
RBFOX1-219ENST00000569895 EGFRP00533 1210 aa28.6■■■□□ 2.17
RBFOX1-219ENST00000569895 COA1Q9GZY4 146 aa28.6■■■□□ 2.17
RBFOX1-219ENST00000569895 USP17L8P0C7I0 530 aa28.59■■■□□ 2.17
RBFOX1-219ENST00000569895 MAP2K2P36507 400 aa28.59■■■□□ 2.17
RBFOX1-219ENST00000569895 ZNF280AP59817 542 aaPredicted RBP28.59■■■□□ 2.17
RBFOX1-219ENST00000569895 IFIT5Q13325 482 aaKnown RBP28.59■■■□□ 2.17
RBFOX1-219ENST00000569895 ZNF609O15014 1411 aa28.59■■■□□ 2.17
RBFOX1-219ENST00000569895 MYH3P11055 1940 aa28.59■■■□□ 2.17
RBFOX1-219ENST00000569895 KCNJ4P48050 445 aa28.58■■■□□ 2.17
RBFOX1-219ENST00000569895 SULF1Q8IWU6 871 aa28.58■■■□□ 2.17
RBFOX1-219ENST00000569895 C9orf78Q9NZ63 289 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms