RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 PDGFDQ9GZP0 370 aaPredicted RBP8.64□□□□□ -1.03
LINC00556-201ENST00000569603 PGPEP1Q9NXJ5 209 aa8.64□□□□□ -1.03
LINC00556-201ENST00000569603 RGPD2P0DJD1 1756 aa8.63□□□□□ -1.03
LINC00556-201ENST00000569603 COL24A1Q17RW2 1714 aa8.63□□□□□ -1.03
LINC00556-201ENST00000569603 SPINT1O43278 529 aa8.63□□□□□ -1.03
LINC00556-201ENST00000569603 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.63□□□□□ -1.03
LINC00556-201ENST00000569603 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
LINC00556-201ENST00000569603 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
LINC00556-201ENST00000569603 TONSLQ96HA7 1378 aa8.62□□□□□ -1.03
LINC00556-201ENST00000569603 ST20-MTHFSA0A0A6YYL1 179 aa8.62□□□□□ -1.03
LINC00556-201ENST00000569603 ZBTB7CA1YPR0 619 aa8.62□□□□□ -1.03
LINC00556-201ENST00000569603 KCNQ2O43526 872 aa8.62□□□□□ -1.03
LINC00556-201ENST00000569603 INTS6LQ5JSJ4 861 aaKnown RBP8.62□□□□□ -1.03
LINC00556-201ENST00000569603 AGBL1Q96MI9 1066 aa8.62□□□□□ -1.03
LINC00556-201ENST00000569603 MYOM1P52179 1685 aa8.62□□□□□ -1.03
LINC00556-201ENST00000569603 QSER1Q2KHR3 1735 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
LINC00556-201ENST00000569603 GSK3AP49840 483 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 SKIV2LQ15477 1246 aaKnown RBP8.61□□□□□ -1.03
LINC00556-201ENST00000569603 TXNRD1Q16881 649 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 SH3D19Q5HYK7 790 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 ZBTB33Q86T24 672 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 IP6K1Q92551 441 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 CNTNAP3BQ96NU0 1288 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.61□□□□□ -1.03
LINC00556-201ENST00000569603 CNTNAP3Q9BZ76 1288 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 GPBP1L1Q9HC44 474 aaPredicted RBP8.61□□□□□ -1.03
LINC00556-201ENST00000569603 TERF2IPQ9NYB0 399 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
LINC00556-201ENST00000569603 EXOC5O00471 708 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 CTSOP43234 321 aaPredicted RBP8.6□□□□□ -1.03
LINC00556-201ENST00000569603 SUZ12Q15022 739 aaKnown RBP8.6□□□□□ -1.03
LINC00556-201ENST00000569603 HDGFL2Q7Z4V5 671 aaPredicted RBP8.6□□□□□ -1.03
LINC00556-201ENST00000569603 CCDC155Q8N6L0 562 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 EPS8L1Q8TE68 723 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 ANKRD24Q8TF21 1146 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 CHMP4AQ9BY43 222 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 LY75O60449 1722 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 ANKRD26Q9UPS8 1709 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 NSD2O96028 1365 aa8.6□□□□□ -1.03
LINC00556-201ENST00000569603 TUBGCP6Q96RT7 1819 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 MAP3K19Q56UN5 1328 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 ZC3H4Q9UPT8 1303 aaKnown RBP8.59□□□□□ -1.03
LINC00556-201ENST00000569603 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 IL2RBP14784 551 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 RELBQ01201 579 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 RNFT1Q5M7Z0 435 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 PPP2R2DQ66LE6 453 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 TMC1Q8TDI8 760 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 FAM117AQ9C073 453 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 SPON1Q9HCB6 807 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 HMX1Q9NP08 348 aaPredicted RBP8.59□□□□□ -1.03
LINC00556-201ENST00000569603 CDV3Q9UKY7 258 aaKnown RBP8.59□□□□□ -1.03
LINC00556-201ENST00000569603 USP47Q96K76 1375 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 MEGF6O75095 1541 aa8.59□□□□□ -1.03
LINC00556-201ENST00000569603 NCAPD2Q15021 1401 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 FYB1O15117 783 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 FBLN1P23142 703 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 HOXC9P31274 260 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 SLC15A2Q16348 729 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 INSM2Q96T92 566 aaPredicted RBP8.58□□□□□ -1.04
LINC00556-201ENST00000569603 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
LINC00556-201ENST00000569603 KDM4CQ9H3R0 1056 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 LRRC4BQ9NT99 713 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 NLRP2Q9NX02 1062 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 KIF20BQ96Q89 1820 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 RTL1A6NKG5 1358 aa8.58□□□□□ -1.04
LINC00556-201ENST00000569603 DOT1LQ8TEK3 1739 aa8.57□□□□□ -1.04
LINC00556-201ENST00000569603 AP1G2O75843 785 aa8.57□□□□□ -1.04
LINC00556-201ENST00000569603 DHX9Q08211 1270 aaKnown RBP8.57□□□□□ -1.04
LINC00556-201ENST00000569603 NANOS1Q8WY41 292 aaKnown RBP8.57□□□□□ -1.04
LINC00556-201ENST00000569603 PTK2Q05397 1052 aa8.56□□□□□ -1.04
LINC00556-201ENST00000569603 KCNMA1Q12791 1236 aa8.56□□□□□ -1.04
LINC00556-201ENST00000569603 ZNF827Q17R98 1081 aa8.56□□□□□ -1.04
LINC00556-201ENST00000569603 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
LINC00556-201ENST00000569603 UBE2Q2Q8WVN8 375 aa8.56□□□□□ -1.04
LINC00556-201ENST00000569603 MAP3K5Q99683 1374 aa8.56□□□□□ -1.04
LINC00556-201ENST00000569603 ZBTB7AO95365 584 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 USP17L8P0C7I0 530 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 ITGA6P23229 1130 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 RAB15P59190 212 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 NBPF6Q5VWK0 638 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 ACSBG1Q96GR2 724 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 NBPF4Q96M43 638 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 BCL11AQ9H165 835 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 ZNF395Q9H8N7 513 aaPredicted RBP8.55□□□□□ -1.04
LINC00556-201ENST00000569603 KIF24Q5T7B8 1368 aa8.55□□□□□ -1.04
LINC00556-201ENST00000569603 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 TOGARAM1Q9Y4F4 1720 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 INSRP06213 1382 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 ZNF385CQ66K41 422 aaPredicted RBP8.54□□□□□ -1.04
LINC00556-201ENST00000569603 KCTD17Q8N5Z5 321 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 KDF1Q8NAX2 398 aaPredicted RBP8.54□□□□□ -1.04
LINC00556-201ENST00000569603 COG3Q96JB2 828 aa8.54□□□□□ -1.04
LINC00556-201ENST00000569603 MTFR1LQ9H019 292 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms