RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 XAGE2Q96GT9 111 aa27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 NYXQ9GZU5 481 aa27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 LSG1Q9H089 658 aaKnown RBP27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 RAD50Q92878 1312 aa27.31■■□□□ 1.96
VCPKMT-205ENST00000569518 ATP2B3Q16720 1220 aa27.3■■□□□ 1.96
VCPKMT-205ENST00000569518 C3orf67Q6ZVT6 689 aa27.3■■□□□ 1.96
VCPKMT-205ENST00000569518 MROH5Q6ZUA9 1318 aa27.3■■□□□ 1.96
VCPKMT-205ENST00000569518 PDE8BO95263 885 aa27.3■■□□□ 1.96
VCPKMT-205ENST00000569518 PROM2Q8N271 834 aa27.3■■□□□ 1.96
VCPKMT-205ENST00000569518 NDUFB9Q9Y6M9 179 aa27.3■■□□□ 1.96
VCPKMT-205ENST00000569518 NMIQ13287 307 aaPredicted RBP27.29■■□□□ 1.96
VCPKMT-205ENST00000569518 HSCBQ8IWL3 235 aa27.29■■□□□ 1.96
VCPKMT-205ENST00000569518 DNAJC2Q99543 621 aaKnown RBP27.29■■□□□ 1.96
VCPKMT-205ENST00000569518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.28■■□□□ 1.96
VCPKMT-205ENST00000569518 TXNRD1Q16881 649 aa27.28■■□□□ 1.96
VCPKMT-205ENST00000569518 FAM227BQ96M60 508 aa27.28■■□□□ 1.96
VCPKMT-205ENST00000569518 RGS17Q9UGC6 210 aaPredicted RBP27.28■■□□□ 1.96
VCPKMT-205ENST00000569518 CD2BP2O95400 341 aaKnown RBP27.27■■□□□ 1.96
VCPKMT-205ENST00000569518 MCCP23508 829 aa27.27■■□□□ 1.96
VCPKMT-205ENST00000569518 ANAPC15P60006 121 aa27.27■■□□□ 1.96
VCPKMT-205ENST00000569518 NBPF5PQ86XG9 351 aaPredicted RBP27.27■■□□□ 1.96
VCPKMT-205ENST00000569518 TICAM2Q86XR7 235 aa27.27■■□□□ 1.96
VCPKMT-205ENST00000569518 MED23Q9ULK4 1368 aa27.27■■□□□ 1.96
VCPKMT-205ENST00000569518 SSFA2P28290 1259 aa27.26■■□□□ 1.95
VCPKMT-205ENST00000569518 HSPA4P34932 840 aa27.26■■□□□ 1.95
VCPKMT-205ENST00000569518 CCDC158Q5M9N0 1113 aa27.26■■□□□ 1.95
VCPKMT-205ENST00000569518 KBTBD3Q8NAB2 608 aa27.26■■□□□ 1.95
VCPKMT-205ENST00000569518 PAG1Q9NWQ8 432 aa27.26■■□□□ 1.95
VCPKMT-205ENST00000569518 PALD1Q9ULE6 856 aa27.26■■□□□ 1.95
VCPKMT-205ENST00000569518 A0A1B0GUL6 1792 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 A0A0D9SFI3 127 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 PLSCR1O15162 318 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 IFIT1P09914 478 aaKnown RBP27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 FGFR2P21802 821 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 MPHOSPH8Q99549 860 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 TNS1Q9HBL0 1735 aaKnown RBP27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 CARMIL3Q8ND23 1372 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 PUM3Q15397 648 aaKnown RBP27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 KIAA1211Q6ZU35 1233 aa27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 DDX46Q7L014 1031 aaKnown RBP27.25■■□□□ 1.95
VCPKMT-205ENST00000569518 HMGB2P26583 209 aaKnown RBP27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 GTF2E1P29083 439 aaPredicted RBP27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 IGHMBP2P38935 993 aaKnown RBP27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 GORABQ5T7V8 394 aa27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 TPTE2Q6XPS3 522 aa27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 CDC5LQ99459 802 aaKnown RBP27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 AKAP11Q9UKA4 1901 aa27.24■■□□□ 1.95
VCPKMT-205ENST00000569518 NFIXQ14938 502 aa27.23■■□□□ 1.95
VCPKMT-205ENST00000569518 TTC39AQ5SRH9 613 aa27.23■■□□□ 1.95
VCPKMT-205ENST00000569518 ZNF512BQ96KM6 892 aaPredicted RBP27.23■■□□□ 1.95
VCPKMT-205ENST00000569518 TAF1P21675 1872 aa27.23■■□□□ 1.95
VCPKMT-205ENST00000569518 TNRC6CQ9HCJ0 1690 aaKnown RBP27.23■■□□□ 1.95
VCPKMT-205ENST00000569518 GOLIM4O00461 696 aa27.23■■□□□ 1.95
VCPKMT-205ENST00000569518 LPIN2Q92539 896 aa27.22■■□□□ 1.95
VCPKMT-205ENST00000569518 RGPD3A6NKT7 1758 aaPredicted RBP27.21■■□□□ 1.95
VCPKMT-205ENST00000569518 RGPD4Q7Z3J3 1758 aa27.21■■□□□ 1.95
VCPKMT-205ENST00000569518 CCDC171Q6TFL3 1326 aa27.21■■□□□ 1.95
VCPKMT-205ENST00000569518 PTH1RQ03431 593 aa27.21■■□□□ 1.95
VCPKMT-205ENST00000569518 HELBQ8NG08 1087 aaPredicted RBP27.21■■□□□ 1.95
VCPKMT-205ENST00000569518 GYS1P13807 737 aa27.2■■□□□ 1.95
VCPKMT-205ENST00000569518 SCARF1Q14162 830 aa27.2■■□□□ 1.95
VCPKMT-205ENST00000569518 ANTXR1Q9H6X2 564 aa27.2■■□□□ 1.95
VCPKMT-205ENST00000569518 POTEAQ6S8J7 498 aa27.2■■□□□ 1.94
VCPKMT-205ENST00000569518 K7ELQ4 463 aaPredicted RBP27.19■■□□□ 1.94
VCPKMT-205ENST00000569518 FBXO41Q8TF61 875 aa27.19■■□□□ 1.94
VCPKMT-205ENST00000569518 APBA3O96018 575 aa27.18■■□□□ 1.94
VCPKMT-205ENST00000569518 ANKRD18AQ8IVF6 992 aa27.18■■□□□ 1.94
VCPKMT-205ENST00000569518 NLRP3Q96P20 1036 aa27.18■■□□□ 1.94
VCPKMT-205ENST00000569518 ZNF589Q86UQ0 364 aaPredicted RBP27.18■■□□□ 1.94
VCPKMT-205ENST00000569518 CHGBP05060 677 aa27.17■■□□□ 1.94
VCPKMT-205ENST00000569518 CHRNDQ07001 517 aa27.17■■□□□ 1.94
VCPKMT-205ENST00000569518 MAP4K1Q92918 833 aa27.17■■□□□ 1.94
VCPKMT-205ENST00000569518 KCNB2Q92953 911 aa27.17■■□□□ 1.94
VCPKMT-205ENST00000569518 BSDC1Q9NW68 430 aaPredicted RBP27.17■■□□□ 1.94
VCPKMT-205ENST00000569518 TAF5LO75529 589 aa27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 SLC5A1P13866 664 aa27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 ARID4AP29374 1257 aaPredicted RBP27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 MCAMP43121 646 aa27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 CCDC102BQ68D86 513 aa27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 FKBP4Q02790 459 aaKnown RBP eCLIP27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 SNX14Q9Y5W7 946 aa27.16■■□□□ 1.94
VCPKMT-205ENST00000569518 ST18O60284 1047 aa27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 PHKA1P46020 1223 aa27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 ZNF827Q17R98 1081 aa27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 CCDC24Q8N4L8 307 aa27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 CELF1Q92879 486 aaKnown RBP27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 AKT1S1Q96B36 256 aa27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 SLKQ9H2G2 1235 aaPredicted RBP27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 MYH7P12883 1935 aa27.15■■□□□ 1.94
VCPKMT-205ENST00000569518 ZAP70P43403 619 aa27.14■■□□□ 1.94
VCPKMT-205ENST00000569518 NECTIN1Q15223 517 aa27.14■■□□□ 1.94
VCPKMT-205ENST00000569518 PI16Q6UXB8 463 aa27.14■■□□□ 1.94
VCPKMT-205ENST00000569518 RASEFQ8IZ41 740 aa27.14■■□□□ 1.94
VCPKMT-205ENST00000569518 CNBD1Q8NA66 436 aa27.14■■□□□ 1.94
VCPKMT-205ENST00000569518 SNAP23O00161 211 aa27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 TM4SF1P30408 202 aa27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 MCMDC2Q4G0Z9 681 aa27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 ZMYM1Q5SVZ6 1142 aa27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 UQCRFS1P1P0C7P4 283 aa27.13■■□□□ 1.93
VCPKMT-205ENST00000569518 ANP32EQ9BTT0 268 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms