RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 LTBP3Q9NS15 1303 aa19.99■□□□□ 0.79
USB1-215ENST00000569252 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
USB1-215ENST00000569252 CSF1RP07333 972 aa19.98■□□□□ 0.79
USB1-215ENST00000569252 EAPPQ56P03 285 aaPredicted RBP19.98■□□□□ 0.79
USB1-215ENST00000569252 CDC5LQ99459 802 aaKnown RBP19.98■□□□□ 0.79
USB1-215ENST00000569252 CREBZFQ9NS37 354 aa19.98■□□□□ 0.79
USB1-215ENST00000569252 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
USB1-215ENST00000569252 CRY2Q49AN0 593 aa19.97■□□□□ 0.79
USB1-215ENST00000569252 TAF1DQ9H5J8 278 aaPredicted RBP19.97■□□□□ 0.79
USB1-215ENST00000569252 PASKQ96RG2 1323 aa19.97■□□□□ 0.79
USB1-215ENST00000569252 IGHMBP2P38935 993 aaKnown RBP19.96■□□□□ 0.79
USB1-215ENST00000569252 EPHA10Q5JZY3 1008 aa19.96■□□□□ 0.79
USB1-215ENST00000569252 C3orf67Q6ZVT6 689 aa19.96■□□□□ 0.79
USB1-215ENST00000569252 CRAMP1Q96RY5 1269 aa19.96■□□□□ 0.79
USB1-215ENST00000569252 GREM2Q9H772 168 aa19.96■□□□□ 0.79
USB1-215ENST00000569252 C1orf115Q9H7X2 142 aa19.96■□□□□ 0.79
USB1-215ENST00000569252 COL4A5P29400 1685 aa19.96■□□□□ 0.79
USB1-215ENST00000569252 CNTNAP1P78357 1384 aa19.95■□□□□ 0.79
USB1-215ENST00000569252 SRGAP3O43295 1099 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 BBOX1O75936 387 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 ITGA6P23229 1130 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 HOXA10P31260 410 aaPredicted RBP19.95■□□□□ 0.78
USB1-215ENST00000569252 FMR1Q06787 632 aaKnown RBP eCLIP19.95■□□□□ 0.78
USB1-215ENST00000569252 RABL6Q3YEC7 729 aaPredicted RBP19.95■□□□□ 0.78
USB1-215ENST00000569252 ANKRD18AQ8IVF6 992 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 RPAP2Q8IXW5 612 aaPredicted RBP19.95■□□□□ 0.78
USB1-215ENST00000569252 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 KAZALD1Q96I82 304 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 MPHOSPH8Q99549 860 aa19.95■□□□□ 0.78
USB1-215ENST00000569252 HMMRO75330 724 aa19.94■□□□□ 0.78
USB1-215ENST00000569252 VEGFBP49765 207 aa19.94■□□□□ 0.78
USB1-215ENST00000569252 RPS8P62241 208 aaKnown RBP19.94■□□□□ 0.78
USB1-215ENST00000569252 ATP8B2P98198 1209 aa19.94■□□□□ 0.78
USB1-215ENST00000569252 CCDC93Q567U6 631 aa19.94■□□□□ 0.78
USB1-215ENST00000569252 GRAPQ13588 217 aa19.93■□□□□ 0.78
USB1-215ENST00000569252 FAM161AQ3B820 660 aa19.93■□□□□ 0.78
USB1-215ENST00000569252 MAP1SQ66K74 1059 aaPredicted RBP19.93■□□□□ 0.78
USB1-215ENST00000569252 TMC4Q7Z404 712 aa19.93■□□□□ 0.78
USB1-215ENST00000569252 ANKRD44Q8N8A2 993 aa19.93■□□□□ 0.78
USB1-215ENST00000569252 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
USB1-215ENST00000569252 CLEC11AQ9Y240 323 aa19.93■□□□□ 0.78
USB1-215ENST00000569252 ITGBL1O95965 494 aaPredicted RBP19.92■□□□□ 0.78
USB1-215ENST00000569252 FKBP4Q02790 459 aaKnown RBP eCLIP19.92■□□□□ 0.78
USB1-215ENST00000569252 LDHDQ86WU2 507 aa19.92■□□□□ 0.78
USB1-215ENST00000569252 SEC31BQ9NQW1 1179 aa19.92■□□□□ 0.78
USB1-215ENST00000569252 ADAMTSL1Q8N6G6 1762 aa19.92■□□□□ 0.78
USB1-215ENST00000569252 SCN4AP35499 1836 aa19.92■□□□□ 0.78
USB1-215ENST00000569252 LTBP1Q14766 1721 aa19.91■□□□□ 0.78
USB1-215ENST00000569252 L3MBTL3Q96JM7 780 aaPredicted RBP19.91■□□□□ 0.78
USB1-215ENST00000569252 RTL9Q8NET4 1388 aa19.91■□□□□ 0.78
USB1-215ENST00000569252 PPEF1O14829 653 aaPredicted RBP19.9■□□□□ 0.78
USB1-215ENST00000569252 MTX1Q13505 466 aa19.9■□□□□ 0.78
USB1-215ENST00000569252 CEP85Q6P2H3 762 aa19.9■□□□□ 0.78
USB1-215ENST00000569252 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
USB1-215ENST00000569252 CNNM1Q9NRU3 951 aa19.9■□□□□ 0.78
USB1-215ENST00000569252 EPHX2P34913 555 aa19.89■□□□□ 0.77
USB1-215ENST00000569252 CELF1Q92879 486 aaKnown RBP19.89■□□□□ 0.77
USB1-215ENST00000569252 DDX60Q8IY21 1712 aaKnown RBP19.88■□□□□ 0.77
USB1-215ENST00000569252 SNED1Q8TER0 1413 aa19.88■□□□□ 0.77
USB1-215ENST00000569252 IQCA1LA6NCM1 817 aa19.88■□□□□ 0.77
USB1-215ENST00000569252 IARSP41252 1262 aaKnown RBP19.88■□□□□ 0.77
USB1-215ENST00000569252 G3BP1Q13283 466 aaKnown RBP eCLIP19.88■□□□□ 0.77
USB1-215ENST00000569252 SOGA3Q5TF21 947 aa19.88■□□□□ 0.77
USB1-215ENST00000569252 BSDC1Q9NW68 430 aaPredicted RBP19.88■□□□□ 0.77
USB1-215ENST00000569252 HACL1Q9UJ83 578 aa19.88■□□□□ 0.77
USB1-215ENST00000569252 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
USB1-215ENST00000569252 LBX1P52954 281 aa19.87■□□□□ 0.77
USB1-215ENST00000569252 OS9Q13438 667 aaPredicted RBP19.87■□□□□ 0.77
USB1-215ENST00000569252 GRIPAP1Q4V328 841 aa19.87■□□□□ 0.77
USB1-215ENST00000569252 CC2D2BQ6DHV5 1058 aa19.87■□□□□ 0.77
USB1-215ENST00000569252 SP8Q8IXZ3 490 aa19.87■□□□□ 0.77
USB1-215ENST00000569252 ZNF594Q96JF6 807 aaPredicted RBP19.87■□□□□ 0.77
USB1-215ENST00000569252 RWDD1Q9H446 243 aaPredicted RBP19.87■□□□□ 0.77
USB1-215ENST00000569252 GJA3Q9Y6H8 435 aa19.87■□□□□ 0.77
USB1-215ENST00000569252 LAMB2P55268 1798 aa19.86■□□□□ 0.77
USB1-215ENST00000569252 PNMA6EA0A0J9YXQ4 647 aa19.86■□□□□ 0.77
USB1-215ENST00000569252 HSP90AB4PQ58FF6 505 aa19.86■□□□□ 0.77
USB1-215ENST00000569252 SSH3Q8TE77 659 aa19.86■□□□□ 0.77
USB1-215ENST00000569252 FBXO3Q9UK99 471 aa19.86■□□□□ 0.77
USB1-215ENST00000569252 ATP6V0A2Q9Y487 856 aa19.86■□□□□ 0.77
USB1-215ENST00000569252 MYH3P11055 1940 aa19.85■□□□□ 0.77
USB1-215ENST00000569252 SURF6O75683 361 aaKnown RBP19.85■□□□□ 0.77
USB1-215ENST00000569252 CNTROBQ8N137 903 aa19.85■□□□□ 0.77
USB1-215ENST00000569252 ANKRD2Q9GZV1 360 aa19.85■□□□□ 0.77
USB1-215ENST00000569252 SIL1Q9H173 461 aa19.85■□□□□ 0.77
USB1-215ENST00000569252 COPRSQ9NQ92 184 aa19.85■□□□□ 0.77
USB1-215ENST00000569252 ANKIB1Q9P2G1 1089 aa19.85■□□□□ 0.77
USB1-215ENST00000569252 FZD9O00144 591 aa19.84■□□□□ 0.77
USB1-215ENST00000569252 PTPN12Q05209 780 aaKnown RBP19.84■□□□□ 0.77
USB1-215ENST00000569252 GRM1Q13255 1194 aa19.84■□□□□ 0.77
USB1-215ENST00000569252 POLA2Q14181 598 aa19.84■□□□□ 0.77
USB1-215ENST00000569252 ERICH6BQ5W0A0 696 aa19.84■□□□□ 0.77
USB1-215ENST00000569252 KLHDC4Q8TBB5 520 aa19.84■□□□□ 0.77
USB1-215ENST00000569252 PCDHB15Q9Y5E8 787 aa19.84■□□□□ 0.77
USB1-215ENST00000569252 EYA2O00167 538 aa19.83■□□□□ 0.77
USB1-215ENST00000569252 IL15P40933 162 aaPredicted RBP19.83■□□□□ 0.77
USB1-215ENST00000569252 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
USB1-215ENST00000569252 RTKN2Q8IZC4 609 aa19.83■□□□□ 0.77
USB1-215ENST00000569252 ZBTB47Q9UFB7 747 aaPredicted RBP19.83■□□□□ 0.77
USB1-215ENST00000569252 MROH5Q6ZUA9 1318 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms