RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 ATP13A2Q9NQ11 1180 aa11.24□□□□□ -0.61
CDH11-216ENST00000569128 PTPRMP28827 1452 aa11.24□□□□□ -0.61
CDH11-216ENST00000569128 SLC52A1Q9NWF4 448 aa11.23□□□□□ -0.61
CDH11-216ENST00000569128 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
CDH11-216ENST00000569128 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
CDH11-216ENST00000569128 SPATA31E1Q6ZUB1 1445 aa11.23□□□□□ -0.61
CDH11-216ENST00000569128 PIK3C2BO00750 1634 aa11.23□□□□□ -0.61
CDH11-216ENST00000569128 UNCXA6NJT0 531 aa11.22□□□□□ -0.61
CDH11-216ENST00000569128 ZEB1P37275 1124 aaPredicted RBP11.22□□□□□ -0.61
CDH11-216ENST00000569128 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
CDH11-216ENST00000569128 MYO19Q96H55 970 aa11.22□□□□□ -0.61
CDH11-216ENST00000569128 DNMT3LQ9UJW3 386 aa11.22□□□□□ -0.61
CDH11-216ENST00000569128 RTN1Q16799 776 aa11.21□□□□□ -0.61
CDH11-216ENST00000569128 NBPF1Q3BBV0 1214 aa11.21□□□□□ -0.61
CDH11-216ENST00000569128 TNFRSF10BO14763 440 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 ERCC3P19447 782 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 ZNF326Q5BKZ1 582 aaKnown RBP11.2□□□□□ -0.62
CDH11-216ENST00000569128 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 DCAF11Q8TEB1 546 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 TIMMDC1Q9NPL8 285 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 KLK14Q9P0G3 267 aa11.2□□□□□ -0.62
CDH11-216ENST00000569128 KIF1BO60333 1816 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 MYO5BQ9ULV0 1848 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 MPSTP25325 297 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 DGKZQ13574 1117 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 ECM1Q16610 540 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 WDR44Q5JSH3 913 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 IGSF5Q9NSI5 407 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 ZDHHC3Q9NYG2 299 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 STIM2Q9P246 746 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 ADGRB3O60242 1522 aa11.19□□□□□ -0.62
CDH11-216ENST00000569128 TMEM131LA2VDJ0 1609 aa11.18□□□□□ -0.62
CDH11-216ENST00000569128 SOBPA7XYQ1 873 aa11.18□□□□□ -0.62
CDH11-216ENST00000569128 MAN1A2O60476 641 aa11.18□□□□□ -0.62
CDH11-216ENST00000569128 FAM13AO94988 1023 aa11.17□□□□□ -0.62
CDH11-216ENST00000569128 TATP17735 454 aaPredicted RBP11.17□□□□□ -0.62
CDH11-216ENST00000569128 C11orf91Q3C1V1 193 aa11.17□□□□□ -0.62
CDH11-216ENST00000569128 RHPN1Q8TCX5 695 aa11.17□□□□□ -0.62
CDH11-216ENST00000569128 KLRG1Q96E93 195 aa11.17□□□□□ -0.62
CDH11-216ENST00000569128 A2ML1A8K2U0 1454 aa11.17□□□□□ -0.62
CDH11-216ENST00000569128 ADGRF5Q8IZF2 1346 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 HMGB1P09429 215 aaKnown RBP11.16□□□□□ -0.62
CDH11-216ENST00000569128 NPR3P17342 541 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 ATP4AP20648 1035 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 MSX1P28360 303 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 ARHGAP4P98171 946 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.16□□□□□ -0.62
CDH11-216ENST00000569128 FAM26DQ5JW98 314 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 BICDL1Q6ZP65 573 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 C7orf43Q8WVR3 580 aa11.16□□□□□ -0.62
CDH11-216ENST00000569128 NLRP1Q9C000 1473 aa11.15□□□□□ -0.62
CDH11-216ENST00000569128 A0A1B0GTH6 734 aa11.15□□□□□ -0.62
CDH11-216ENST00000569128 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
CDH11-216ENST00000569128 GPAMQ9HCL2 828 aa11.15□□□□□ -0.62
CDH11-216ENST00000569128 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.62
CDH11-216ENST00000569128 UBR1Q8IWV7 1749 aa11.15□□□□□ -0.63
CDH11-216ENST00000569128 MARSP56192 900 aaKnown RBP11.14□□□□□ -0.63
CDH11-216ENST00000569128 ARSJQ5FYB0 599 aaPredicted RBP11.14□□□□□ -0.63
CDH11-216ENST00000569128 IFT43Q96FT9 208 aa11.14□□□□□ -0.63
CDH11-216ENST00000569128 NEURL4Q96JN8 1562 aa11.14□□□□□ -0.63
CDH11-216ENST00000569128 NEXMIFQ5QGS0 1516 aa11.14□□□□□ -0.63
CDH11-216ENST00000569128 RPGRIP1LQ68CZ1 1315 aa11.13□□□□□ -0.63
CDH11-216ENST00000569128 RIMS2Q9UQ26 1411 aa11.13□□□□□ -0.63
CDH11-216ENST00000569128 ZBTB39O15060 712 aa11.13□□□□□ -0.63
CDH11-216ENST00000569128 EIF1AXP47813 144 aaKnown RBP11.13□□□□□ -0.63
CDH11-216ENST00000569128 ETFBKMTQ8IXQ9 262 aa11.13□□□□□ -0.63
CDH11-216ENST00000569128 BCS1LQ9Y276 419 aa11.13□□□□□ -0.63
CDH11-216ENST00000569128 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
CDH11-216ENST00000569128 CEP170BQ9Y4F5 1589 aaPredicted RBP11.12□□□□□ -0.63
CDH11-216ENST00000569128 LTKP29376 864 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 AAMPQ13685 434 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 NOM1Q5C9Z4 860 aaKnown RBP11.12□□□□□ -0.63
CDH11-216ENST00000569128 DNAJC14Q6Y2X3 702 aaPredicted RBP11.12□□□□□ -0.63
CDH11-216ENST00000569128 ABTB2Q8N961 1025 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 ZNF280CQ8ND82 737 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 HSH2DQ96JZ2 352 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 GAS2L1Q99501 681 aaPredicted RBP11.12□□□□□ -0.63
CDH11-216ENST00000569128 DYRK1BQ9Y463 629 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 IFT172Q9UG01 1749 aa11.12□□□□□ -0.63
CDH11-216ENST00000569128 PRAG1Q86YV5 1406 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 PPLO60437 1756 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 Q6ZNB5 142 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 ATCAYQ86WG3 371 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 THEMISQ8N1K5 641 aaPredicted RBP11.11□□□□□ -0.63
CDH11-216ENST00000569128 SUSD3Q96L08 255 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 GMPR2Q9P2T1 348 aaKnown RBP11.11□□□□□ -0.63
CDH11-216ENST00000569128 TMEM2Q9UHN6 1383 aa11.11□□□□□ -0.63
CDH11-216ENST00000569128 ZFYVE9O95405 1425 aa11.1□□□□□ -0.63
CDH11-216ENST00000569128 UHRF1BP1Q6BDS2 1440 aa11.1□□□□□ -0.63
CDH11-216ENST00000569128 MAPK1P28482 360 aa11.1□□□□□ -0.63
CDH11-216ENST00000569128 HSPA2P54652 639 aa11.1□□□□□ -0.63
CDH11-216ENST00000569128 RUBCNLQ9H714 662 aa11.1□□□□□ -0.63
CDH11-216ENST00000569128 NEUROD4Q9HD90 331 aa11.1□□□□□ -0.63
CDH11-216ENST00000569128 A0A1W2PNR3 127 aa11.09□□□□□ -0.63
CDH11-216ENST00000569128 F11P03951 625 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms