RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 DEFB115Q30KQ5 88 aa21.23■□□□□ 0.99
CDR2-207ENST00000569045 G2E3Q7L622 706 aa21.23■□□□□ 0.99
CDR2-207ENST00000569045 ZC3H15Q8WU90 426 aaKnown RBP21.23■□□□□ 0.99
CDR2-207ENST00000569045 RPS12P25398 132 aaKnown RBP21.22■□□□□ 0.99
CDR2-207ENST00000569045 DOK7Q18PE1 504 aa21.22■□□□□ 0.99
CDR2-207ENST00000569045 CWF19L2Q2TBE0 894 aaKnown RBP21.22■□□□□ 0.99
CDR2-207ENST00000569045 DPF2Q92785 391 aa21.22■□□□□ 0.99
CDR2-207ENST00000569045 XDHP47989 1333 aa21.22■□□□□ 0.99
CDR2-207ENST00000569045 PSMD14O00487 310 aa21.21■□□□□ 0.99
CDR2-207ENST00000569045 VEGFBP49765 207 aa21.21■□□□□ 0.99
CDR2-207ENST00000569045 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
CDR2-207ENST00000569045 UBE3BQ7Z3V4 1068 aa21.21■□□□□ 0.99
CDR2-207ENST00000569045 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
CDR2-207ENST00000569045 AIDAQ96BJ3 306 aa21.21■□□□□ 0.99
CDR2-207ENST00000569045 CACNA1FO60840 1977 aa21.21■□□□□ 0.99
CDR2-207ENST00000569045 RASSF10A6NK89 507 aa21.2■□□□□ 0.98
CDR2-207ENST00000569045 VAMP4O75379 141 aa21.2■□□□□ 0.98
CDR2-207ENST00000569045 MICALL2Q8IY33 904 aa21.2■□□□□ 0.98
CDR2-207ENST00000569045 TTLL11Q8NHH1 800 aa21.2■□□□□ 0.98
CDR2-207ENST00000569045 ATP2B4P23634 1241 aa21.19■□□□□ 0.98
CDR2-207ENST00000569045 GCKRQ14397 625 aa21.19■□□□□ 0.98
CDR2-207ENST00000569045 LINS1Q8NG48 757 aa21.19■□□□□ 0.98
CDR2-207ENST00000569045 GPR101Q96P66 508 aaPredicted RBP21.19■□□□□ 0.98
CDR2-207ENST00000569045 ZBTB12Q9Y330 459 aaPredicted RBP21.19■□□□□ 0.98
CDR2-207ENST00000569045 H7C1W4 665 aa21.18■□□□□ 0.98
CDR2-207ENST00000569045 TRAF5O00463 557 aa21.18■□□□□ 0.98
CDR2-207ENST00000569045 IGHMBP2P38935 993 aaKnown RBP21.18■□□□□ 0.98
CDR2-207ENST00000569045 COL13A1Q5TAT6 717 aaPredicted RBP21.18■□□□□ 0.98
CDR2-207ENST00000569045 PAXIP1Q6ZW49 1069 aaPredicted RBP21.18■□□□□ 0.98
CDR2-207ENST00000569045 BSDC1Q9NW68 430 aaPredicted RBP21.18■□□□□ 0.98
CDR2-207ENST00000569045 PGAP2Q9UHJ9 254 aa21.18■□□□□ 0.98
CDR2-207ENST00000569045 RTL9Q8NET4 1388 aa21.18■□□□□ 0.98
CDR2-207ENST00000569045 COL4A1P02462 1669 aa21.18■□□□□ 0.98
CDR2-207ENST00000569045 MYH3P11055 1940 aa21.17■□□□□ 0.98
CDR2-207ENST00000569045 ECE1P42892 770 aa21.17■□□□□ 0.98
CDR2-207ENST00000569045 CDC37L1Q7L3B6 337 aa21.17■□□□□ 0.98
CDR2-207ENST00000569045 GREM2Q9H772 168 aa21.17■□□□□ 0.98
CDR2-207ENST00000569045 TRPM4Q8TD43 1214 aa21.16■□□□□ 0.98
CDR2-207ENST00000569045 TRPM7Q96QT4 1865 aa21.15■□□□□ 0.98
CDR2-207ENST00000569045 WDR33Q9C0J8 1336 aaKnown RBP21.15■□□□□ 0.98
CDR2-207ENST00000569045 CELF2O95319 508 aaKnown RBP21.15■□□□□ 0.98
CDR2-207ENST00000569045 HIRAP54198 1017 aaPredicted RBP21.15■□□□□ 0.98
CDR2-207ENST00000569045 TNS4Q8IZW8 715 aa21.15■□□□□ 0.98
CDR2-207ENST00000569045 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
CDR2-207ENST00000569045 GLIS2Q9BZE0 524 aaPredicted RBP21.15■□□□□ 0.98
CDR2-207ENST00000569045 VIL1P09327 827 aaKnown RBP21.14■□□□□ 0.97
CDR2-207ENST00000569045 MAP2K1Q02750 393 aaPredicted RBP21.14■□□□□ 0.97
CDR2-207ENST00000569045 FMR1Q06787 632 aaKnown RBP eCLIP21.14■□□□□ 0.975e-8■□□□□ 10.1
CDR2-207ENST00000569045 TBC1D10BQ4KMP7 808 aaPredicted RBP21.14■□□□□ 0.97
CDR2-207ENST00000569045 CST9Q5W186 159 aa21.14■□□□□ 0.97
CDR2-207ENST00000569045 SAMD7Q7Z3H4 446 aa21.14■□□□□ 0.97
CDR2-207ENST00000569045 MPHOSPH8Q99549 860 aa21.14■□□□□ 0.97
CDR2-207ENST00000569045 KCNQ5Q9NR82 932 aa21.14■□□□□ 0.97
CDR2-207ENST00000569045 MINPP1Q9UNW1 487 aa21.14■□□□□ 0.97
CDR2-207ENST00000569045 RBM26Q5T8P6 1007 aaKnown RBP21.13■□□□□ 0.97
CDR2-207ENST00000569045 PODNQ7Z5L7 613 aa21.13■□□□□ 0.97
CDR2-207ENST00000569045 DCPSQ96C86 337 aaKnown RBP21.13■□□□□ 0.97
CDR2-207ENST00000569045 ANKRD2Q9GZV1 360 aa21.13■□□□□ 0.97
CDR2-207ENST00000569045 ZNF408Q9H9D4 720 aa21.13■□□□□ 0.97
CDR2-207ENST00000569045 TLL2Q9Y6L7 1015 aa21.13■□□□□ 0.97
CDR2-207ENST00000569045 SHTN1A0MZ66 631 aa21.12■□□□□ 0.97
CDR2-207ENST00000569045 ITGA6P23229 1130 aa21.12■□□□□ 0.97
CDR2-207ENST00000569045 CTCFP49711 727 aaPredicted RBP21.12■□□□□ 0.97
CDR2-207ENST00000569045 GRM1Q13255 1194 aa21.12■□□□□ 0.97
CDR2-207ENST00000569045 CAPNS2Q96L46 248 aa21.12■□□□□ 0.97
CDR2-207ENST00000569045 CCT4P50991 539 aaKnown RBP21.11■□□□□ 0.97
CDR2-207ENST00000569045 RSBN1LQ6PCB5 846 aaPredicted RBP21.11■□□□□ 0.97
CDR2-207ENST00000569045 USP48Q86UV5 1035 aa21.11■□□□□ 0.97
CDR2-207ENST00000569045 AGBL3Q8NEM8 1001 aa21.11■□□□□ 0.97
CDR2-207ENST00000569045 BEGAINQ9BUH8 593 aa21.11■□□□□ 0.97
CDR2-207ENST00000569045 SPINK5Q9NQ38 1064 aaPredicted RBP21.11■□□□□ 0.97
CDR2-207ENST00000569045 LEMD3Q9Y2U8 911 aa21.11■□□□□ 0.97
CDR2-207ENST00000569045 MED23Q9ULK4 1368 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 ANKRD18BA2A2Z9 1011 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 USP17L3A6NCW0 530 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 USP17L4A6NCW7 530 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 FOXN1O15353 648 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 KIF4BQ2VIQ3 1234 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 FAM161AQ3B820 660 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 USP17L1Q7RTZ2 530 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 KRT26Q7Z3Y9 468 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 WBP1LQ9NX94 342 aa21.1■□□□□ 0.97
CDR2-207ENST00000569045 SPEF2Q9C093 1822 aa21.09■□□□□ 0.97
CDR2-207ENST00000569045 F6X3S4 739 aa21.09■□□□□ 0.97
CDR2-207ENST00000569045 CSF1RP07333 972 aa21.09■□□□□ 0.97
CDR2-207ENST00000569045 KCNJ4P48050 445 aa21.09■□□□□ 0.97
CDR2-207ENST00000569045 CASP7P55210 303 aa21.09■□□□□ 0.97
CDR2-207ENST00000569045 CHMP3Q9Y3E7 222 aa21.09■□□□□ 0.97
CDR2-207ENST00000569045 IFIT5Q13325 482 aaKnown RBP21.08■□□□□ 0.97
CDR2-207ENST00000569045 BEND3Q5T5X7 828 aa21.08■□□□□ 0.97
CDR2-207ENST00000569045 CYP4F22Q6NT55 531 aa21.08■□□□□ 0.97
CDR2-207ENST00000569045 SAPCD2Q86UD0 394 aa21.08■□□□□ 0.97
CDR2-207ENST00000569045 SULF1Q8IWU6 871 aa21.08■□□□□ 0.97
CDR2-207ENST00000569045 HHIPL1Q96JK4 782 aa21.08■□□□□ 0.97
CDR2-207ENST00000569045 C9orf78Q9NZ63 289 aaPredicted RBP21.08■□□□□ 0.97
CDR2-207ENST00000569045 SCN9AQ15858 1988 aa21.07■□□□□ 0.96
CDR2-207ENST00000569045 ZNF609O15014 1411 aa21.07■□□□□ 0.96
CDR2-207ENST00000569045 USP17L8P0C7I0 530 aa21.07■□□□□ 0.96
CDR2-207ENST00000569045 COA1Q9GZY4 146 aa21.07■□□□□ 0.96
CDR2-207ENST00000569045 PRDM10Q9NQV6 1147 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms