RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 TYRO3Q06418 890 aa9.84□□□□□ -0.83
HERPUD1-214ENST00000568651 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
HERPUD1-214ENST00000568651 NLRP8Q86W28 1048 aa9.84□□□□□ -0.83
HERPUD1-214ENST00000568651 DRC1Q96MC2 740 aa9.84□□□□□ -0.83
HERPUD1-214ENST00000568651 RNF19AQ9NV58 838 aa9.84□□□□□ -0.83
HERPUD1-214ENST00000568651 SOS2Q07890 1332 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 FHOD3Q2V2M9 1422 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 A0A1W2PNR3 127 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 UBAP1LF5GYI3 381 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 EIF4BP23588 611 aaKnown RBP9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 ZNF76P36508 570 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 SMCPP49901 116 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 RAD51AP2Q09MP3 1159 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 TRIP4Q15650 581 aaPredicted RBP9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 CTC1Q2NKJ3 1217 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 NAALADL2Q58DX5 795 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 LRRC69Q6ZNQ3 347 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 SRCIN1Q9C0H9 1055 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 DYRK1BQ9Y463 629 aa9.83□□□□□ -0.84
HERPUD1-214ENST00000568651 ZFYVE16Q7Z3T8 1539 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 A6NHS1 94 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 LBRQ14739 615 aaKnown RBP9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 C6orf118Q5T5N4 469 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 TGIF2Q9GZN2 237 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 ELP3Q9H9T3 547 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 ZFYVE28Q9HCC9 887 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 PRXQ9BXM0 1461 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 CTTNBP2Q8WZ74 1663 aa9.82□□□□□ -0.84
HERPUD1-214ENST00000568651 PHACTR2O75167 634 aa9.81□□□□□ -0.84
HERPUD1-214ENST00000568651 NT5DC4Q86YG4 428 aa9.81□□□□□ -0.84
HERPUD1-214ENST00000568651 PMEPA1Q969W9 287 aa9.81□□□□□ -0.84
HERPUD1-214ENST00000568651 CCDC74AQ96AQ1 378 aa9.81□□□□□ -0.84
HERPUD1-214ENST00000568651 C12orf49Q9H741 205 aa9.81□□□□□ -0.84
HERPUD1-214ENST00000568651 NUP153P49790 1475 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 SIGLEC1Q9BZZ2 1709 aa9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 LOC105371045A0A1W2PR82 267 aa9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 KCNQ4P56696 695 aa9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 NLRP2Q9NX02 1062 aa9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 FOXD3Q9UJU5 478 aaPredicted RBP9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 GJA3Q9Y6H8 435 aa9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 SCAPERQ9BY12 1400 aa9.8□□□□□ -0.84
HERPUD1-214ENST00000568651 F11P03951 625 aa9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 CTSHP09668 335 aa9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 PGBD3Q8N328 593 aa9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 FAM8A1Q9UBU6 413 aa9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 PDZRN3Q9UPQ7 1066 aa9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 UHRF1BP1Q6BDS2 1440 aa9.79□□□□□ -0.84
HERPUD1-214ENST00000568651 RAPGEF6Q8TEU7 1601 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 EFCAB5A4FU69 1503 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 POTECB2RU33 542 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 XYLBO75191 536 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 GRNP28799 593 aaKnown RBP9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 NLRP13Q86W25 1043 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 GALNT12Q8IXK2 581 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 CEP63Q96MT8 703 aa9.78□□□□□ -0.84
HERPUD1-214ENST00000568651 RHOQP17081 205 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 ST13P50502 369 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 PTPN12Q05209 780 aaKnown RBP9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 FIGNL1Q6PIW4 674 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 CRIPAKQ8N1N5 446 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 SLC43A3Q8NBI5 491 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 UBXN4Q92575 508 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 ABI2Q9NYB9 513 aaPredicted RBP9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 TMEM63CQ9P1W3 806 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 HECW1Q76N89 1606 aa9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.85
HERPUD1-214ENST00000568651 RICTORQ6R327 1708 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 TTC37Q6PGP7 1564 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 C9orf84Q5VXU9 1444 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 FAM157BP0CG42 384 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 VEGFBP49765 207 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.76□□□□□ -0.853e-6■□□□□ 9.1
HERPUD1-214ENST00000568651 EFHC2Q5JST6 749 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 C9orf131Q5VYM1 1079 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 USPL1Q5W0Q7 1092 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 TRIM46Q7Z4K8 759 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 CHRDQ9H2X0 955 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 CCSER2Q9H7U1 834 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 EFCC1Q9HA90 598 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 BRD7Q9NPI1 651 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 USP20Q9Y2K6 914 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 ATP10AO60312 1499 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 ZMYM4Q5VZL5 1548 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 ARHGEF12Q9NZN5 1544 aa9.76□□□□□ -0.85
HERPUD1-214ENST00000568651 USP31Q70CQ4 1352 aa9.75□□□□□ -0.85
HERPUD1-214ENST00000568651 MAGI2Q86UL8 1455 aa9.75□□□□□ -0.85
HERPUD1-214ENST00000568651 FAM187AA6NFU0 413 aa9.75□□□□□ -0.85
HERPUD1-214ENST00000568651 AFAP1Q8N556 730 aa9.75□□□□□ -0.85
HERPUD1-214ENST00000568651 OSBPL7Q9BZF2 842 aa9.75□□□□□ -0.85
HERPUD1-214ENST00000568651 FER1L4A9Z1Z3 1794 aa9.74□□□□□ -0.85
HERPUD1-214ENST00000568651 DGAT1O75907 488 aa9.74□□□□□ -0.85
HERPUD1-214ENST00000568651 LAMC2Q13753 1193 aa9.74□□□□□ -0.85
HERPUD1-214ENST00000568651 EPS8L3Q8TE67 593 aaKnown RBP9.74□□□□□ -0.85
HERPUD1-214ENST00000568651 TINF2Q9BSI4 451 aa9.74□□□□□ -0.85
HERPUD1-214ENST00000568651 RUBCNLQ9H714 662 aa9.74□□□□□ -0.85
HERPUD1-214ENST00000568651 PTPRTO14522 1441 aa9.73□□□□□ -0.85
HERPUD1-214ENST00000568651 EFSO43281 561 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms