RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 NEMFO60524 1076 aa25.32■■□□□ 1.64
DENND4A-208ENST00000568515 COPRSQ9NQ92 184 aa25.32■■□□□ 1.64
DENND4A-208ENST00000568515 RBM6P78332 1123 aaKnown RBP25.31■■□□□ 1.64
DENND4A-208ENST00000568515 TNNI3KQ59H18 835 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 CTNNA3Q9UI47 895 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 FPGT-TNNI3KV9GXZ4 949 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 ZNF609O15014 1411 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 PSME1Q06323 249 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 SEC62Q99442 399 aaKnown RBP25.31■■□□□ 1.64
DENND4A-208ENST00000568515 LRRC2Q9BYS8 371 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 NDUFB9Q9Y6M9 179 aa25.31■■□□□ 1.64
DENND4A-208ENST00000568515 PFKFB2O60825 505 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 NAA30Q147X3 362 aaPredicted RBP25.3■■□□□ 1.64
DENND4A-208ENST00000568515 MCMDC2Q4G0Z9 681 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 NAA16Q6N069 864 aaPredicted RBP25.3■■□□□ 1.64
DENND4A-208ENST00000568515 CGNQ9P2M7 1197 aaKnown RBP25.3■■□□□ 1.64
DENND4A-208ENST00000568515 KIF13AQ9H1H9 1805 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 KIF20AO95235 890 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 CHGBP05060 677 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 ARID5BQ14865 1188 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 RFX7Q2KHR2 1363 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 FGD1P98174 961 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 TFCP2Q12800 502 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 GOLPH3LQ9H4A5 285 aa25.3■■□□□ 1.64
DENND4A-208ENST00000568515 PHRF1Q9P1Y6 1649 aaKnown RBP25.29■■□□□ 1.64
DENND4A-208ENST00000568515 NSUN7Q8NE18 718 aaKnown RBP25.29■■□□□ 1.64
DENND4A-208ENST00000568515 ZNF592Q92610 1267 aa25.29■■□□□ 1.64
DENND4A-208ENST00000568515 DNAJC2Q99543 621 aaKnown RBP25.29■■□□□ 1.64
DENND4A-208ENST00000568515 MYD88Q99836 296 aa25.29■■□□□ 1.64
DENND4A-208ENST00000568515 FTOQ9C0B1 505 aaKnown RBP eCLIP25.29■■□□□ 1.64
DENND4A-208ENST00000568515 MYL6BP14649 208 aa25.28■■□□□ 1.64
DENND4A-208ENST00000568515 SNW1Q13573 536 aaKnown RBP25.28■■□□□ 1.64
DENND4A-208ENST00000568515 BECN2A8MW95 431 aa25.28■■□□□ 1.64
DENND4A-208ENST00000568515 RFX5P48382 616 aaPredicted RBP25.28■■□□□ 1.64
DENND4A-208ENST00000568515 CCDC73Q6ZRK6 1079 aa25.28■■□□□ 1.64
DENND4A-208ENST00000568515 METTL22Q9BUU2 404 aaPredicted RBP25.28■■□□□ 1.64
DENND4A-208ENST00000568515 SKILP12757 684 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 FOSBP53539 338 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 PTPN12Q05209 780 aaKnown RBP25.27■■□□□ 1.64
DENND4A-208ENST00000568515 STOX1Q6ZVD7 989 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 XAGE3Q8WTP9 111 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 SIPA1L3O60292 1781 aaPredicted RBP25.27■■□□□ 1.64
DENND4A-208ENST00000568515 USP27XA6NNY8 438 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 HMGB1P09429 215 aaKnown RBP25.27■■□□□ 1.64
DENND4A-208ENST00000568515 ANKRD24Q8TF21 1146 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 HAUS7Q99871 368 aa25.27■■□□□ 1.64
DENND4A-208ENST00000568515 CTDNEP1O95476 244 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 DHX32Q7L7V1 743 aaKnown RBP25.26■■□□□ 1.63
DENND4A-208ENST00000568515 ARHGEF25Q86VW2 580 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 DHX40Q8IX18 779 aaKnown RBP25.26■■□□□ 1.63
DENND4A-208ENST00000568515 USP28Q96RU2 1077 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 ANO10Q9NW15 660 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 KINO60870 393 aaKnown RBP25.26■■□□□ 1.63
DENND4A-208ENST00000568515 PTPN14Q15678 1187 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 NYAP1Q6ZVC0 841 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 COPS6Q7L5N1 327 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 ENGASEQ8NFI3 743 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 USP16Q9Y5T5 823 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 MYH15Q9Y2K3 1946 aa25.26■■□□□ 1.63
DENND4A-208ENST00000568515 PTPDC1A2A3K4 754 aa25.25■■□□□ 1.63
DENND4A-208ENST00000568515 ATL3Q6DD88 541 aa25.25■■□□□ 1.63
DENND4A-208ENST00000568515 DBNDD2Q9BQY9 259 aa25.25■■□□□ 1.63
DENND4A-208ENST00000568515 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.25■■□□□ 1.63
DENND4A-208ENST00000568515 GCP02774 474 aa25.25■■□□□ 1.63
DENND4A-208ENST00000568515 ZNF396Q96N95 335 aaPredicted RBP25.25■■□□□ 1.63
DENND4A-208ENST00000568515 DDX41Q9UJV9 622 aaKnown RBP25.25■■□□□ 1.63
DENND4A-208ENST00000568515 CCDC69A6NI79 296 aa25.24■■□□□ 1.63
DENND4A-208ENST00000568515 FAM160A1Q05DH4 1040 aa25.24■■□□□ 1.63
DENND4A-208ENST00000568515 ESCO1Q5FWF5 840 aa25.24■■□□□ 1.63
DENND4A-208ENST00000568515 DDX46Q7L014 1031 aaKnown RBP25.24■■□□□ 1.63
DENND4A-208ENST00000568515 APOBRQ0VD83 1088 aa25.24■■□□□ 1.63
DENND4A-208ENST00000568515 SLC39A6Q13433 755 aa25.24■■□□□ 1.63
DENND4A-208ENST00000568515 FILIP1Q7Z7B0 1213 aa25.24■■□□□ 1.63
DENND4A-208ENST00000568515 A0A087WWV3 80 aa25.23■■□□□ 1.63
DENND4A-208ENST00000568515 CCZ1BP86790 482 aa25.23■■□□□ 1.63
DENND4A-208ENST00000568515 CCZ1P86791 482 aaPredicted RBP25.23■■□□□ 1.63
DENND4A-208ENST00000568515 ZNF790Q6PG37 636 aa25.23■■□□□ 1.63
DENND4A-208ENST00000568515 FSIP1Q8NA03 581 aa25.22■■□□□ 1.63
DENND4A-208ENST00000568515 SH3TC1Q8TE82 1336 aa25.22■■□□□ 1.63
DENND4A-208ENST00000568515 CCT2P78371 535 aaKnown RBP25.21■■□□□ 1.63
DENND4A-208ENST00000568515 EXOSC10Q01780 885 aaKnown RBP25.21■■□□□ 1.63
DENND4A-208ENST00000568515 CEP57L1Q8IYX8 460 aa25.21■■□□□ 1.63
DENND4A-208ENST00000568515 KBTBD3Q8NAB2 608 aa25.21■■□□□ 1.63
DENND4A-208ENST00000568515 ME1P48163 572 aa25.21■■□□□ 1.63
DENND4A-208ENST00000568515 RABL6Q3YEC7 729 aaPredicted RBP25.21■■□□□ 1.63
DENND4A-208ENST00000568515 ANKRD13DQ6ZTN6 518 aa25.21■■□□□ 1.63
DENND4A-208ENST00000568515 RBM33Q96EV2 1170 aaKnown RBP25.21■■□□□ 1.63
DENND4A-208ENST00000568515 AGXT2Q9BYV1 514 aa25.2■■□□□ 1.63
DENND4A-208ENST00000568515 MORC2Q9Y6X9 1032 aaPredicted RBP25.2■■□□□ 1.63
DENND4A-208ENST00000568515 LAMA4Q16363 1823 aa25.2■■□□□ 1.63
DENND4A-208ENST00000568515 IGSF3O75054 1194 aa25.2■■□□□ 1.62
DENND4A-208ENST00000568515 CCAR2Q8N163 923 aaKnown RBP25.2■■□□□ 1.62
DENND4A-208ENST00000568515 AOPEPQ8N6M6 819 aa25.2■■□□□ 1.62
DENND4A-208ENST00000568515 TRMT1Q9NXH9 659 aaKnown RBP25.2■■□□□ 1.62
DENND4A-208ENST00000568515 ZNF215Q9UL58 517 aaPredicted RBP25.2■■□□□ 1.62
DENND4A-208ENST00000568515 KIF18AQ8NI77 898 aa25.2■■□□□ 1.62
DENND4A-208ENST00000568515 UBE3BQ7Z3V4 1068 aa25.19■■□□□ 1.62
DENND4A-208ENST00000568515 NAT10Q9H0A0 1025 aaKnown RBP25.19■■□□□ 1.62
DENND4A-208ENST00000568515 NCOA5Q9HCD5 579 aaKnown RBP25.19■■□□□ 1.62
DENND4A-208ENST00000568515 KCND1Q9NSA2 647 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms