RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 ZNF142P52746 1687 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 TUBGCP6Q96RT7 1819 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 ZBTB7CA1YPR0 619 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 NPHP4O75161 1426 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 TUBB4AP04350 444 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 ZFYP08048 801 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 DCCP43146 1447 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 MCMDC2Q4G0Z9 681 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 FOXD4L5Q5VV16 416 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 TSHZ3Q63HK5 1081 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 GPR153Q6NV75 609 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 ZNF790Q6PG37 636 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 MPRIPQ6WCQ1 1025 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 KRT28Q7Z3Y7 464 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 UNC5CLQ8IV45 518 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 CCDC83Q8IWF9 413 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 FOXD4L4Q8WXT5 416 aaPredicted RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 SPATA32Q96LK8 384 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 NEK1Q96PY6 1258 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 C19orf44Q9H6X5 657 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
ATXN3-250ENST00000568290 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
ATXN3-250ENST00000568290 CRYBG1Q9Y4K1 1723 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 GOLGA6L19H0YKK7 550 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 SLC27A2O14975 620 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 FIBPO43427 364 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 ADCY5O95622 1261 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 GCKRQ14397 625 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 PDIA6Q15084 440 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 DOK7Q18PE1 504 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 USPL1Q5W0Q7 1092 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 NAA16Q6N069 864 aaPredicted RBP9□□□□□ -0.97
ATXN3-250ENST00000568290 USHBP1Q8N6Y0 703 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 TNMDQ9H2S6 317 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 MTMR6Q9Y217 621 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 AKAP2Q9Y2D5 859 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
ATXN3-250ENST00000568290 UQCRHLA0A096LP55 91 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 NEURL1BA8MQ27 555 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 KIF2AO00139 706 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 UQCRHP07919 91 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 ATF3P18847 181 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 NMIQ13287 307 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 ZSCAN25Q6NSZ9 544 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 LMOD2Q6P5Q4 547 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 CCDC73Q6ZRK6 1079 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 RNF214Q8ND24 703 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 DSCC1Q9BVC3 393 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 TEX13AQ9BXU3 409 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 BICC1Q9H694 974 aaKnown RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 CNPY2Q9Y2B0 182 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 CAMTA1Q9Y6Y1 1673 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 ERBB3P21860 1342 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 SH3TC1Q8TE82 1336 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 RGPD8O14715 1765 aaPredicted RBP8.99□□□□□ -0.97
ATXN3-250ENST00000568290 ABCC12Q96J65 1359 aa8.99□□□□□ -0.97
ATXN3-250ENST00000568290 MRC1P22897 1456 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 DPYSL4O14531 572 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 MAP4K4O95819 1239 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 CSB-PGBD3P0DP91 1061 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 IL15P40933 162 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 NOLC1Q14978 699 aaKnown RBP eCLIP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 RABL6Q3YEC7 729 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 LCE2DQ5TA82 110 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 CPLX2Q6PUV4 134 aaKnown RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 PROSER2Q86WR7 435 aaPredicted RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 PDCL2Q8N4E4 241 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 BICD2Q8TD16 824 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 SUCLG2Q96I99 432 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 HAUS7Q99871 368 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 NOL10Q9BSC4 688 aaKnown RBP8.98□□□□□ -0.97
ATXN3-250ENST00000568290 JCADQ9P266 1359 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 MED23Q9ULK4 1368 aa8.98□□□□□ -0.97
ATXN3-250ENST00000568290 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
ATXN3-250ENST00000568290 SNPHO15079 494 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 CCP110O43303 1012 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 CIAO1O76071 339 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 PHKG2P15735 406 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 CDC25BP30305 580 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 CABP4P57796 275 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
ATXN3-250ENST00000568290 AIMP1Q12904 312 aaKnown RBP8.97□□□□□ -0.97
ATXN3-250ENST00000568290 ME3Q16798 604 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 TNNI3KQ59H18 835 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 DHX32Q7L7V1 743 aaKnown RBP8.97□□□□□ -0.97
ATXN3-250ENST00000568290 DRC7Q8IY82 874 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 KBTBD3Q8NAB2 608 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 MYRIPQ8NFW9 859 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 GTF3C6Q969F1 213 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 CCDC34Q96HJ3 373 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 BOLA2Q9H3K6 86 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 SPTLC3Q9NUV7 552 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 ANO10Q9NW15 660 aa8.97□□□□□ -0.97
ATXN3-250ENST00000568290 NLRP2Q9NX02 1062 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms