RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
TCF4-236ENST00000567880 PRR5LQ6MZQ0 368 aa12.82□□□□□ -0.36
TCF4-236ENST00000567880 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
TCF4-236ENST00000567880 SALL3Q9BXA9 1300 aa12.82□□□□□ -0.36
TCF4-236ENST00000567880 EAF2Q96CJ1 260 aaPredicted RBP12.82□□□□□ -0.36
TCF4-236ENST00000567880 CCDC8Q9H0W5 538 aaPredicted RBP12.82□□□□□ -0.36
TCF4-236ENST00000567880 COL4A1P02462 1669 aa12.82□□□□□ -0.36
TCF4-236ENST00000567880 LRP5O75197 1615 aa12.81□□□□□ -0.36
TCF4-236ENST00000567880 MMP10P09238 476 aa12.81□□□□□ -0.36
TCF4-236ENST00000567880 ST5P78524 1137 aa12.81□□□□□ -0.36
TCF4-236ENST00000567880 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
TCF4-236ENST00000567880 TTC22Q5TAA0 569 aa12.81□□□□□ -0.36
TCF4-236ENST00000567880 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
TCF4-236ENST00000567880 ANKRD31Q8N7Z5 1873 aa12.81□□□□□ -0.36
TCF4-236ENST00000567880 GSPT1P15170 499 aaKnown RBP12.8□□□□□ -0.36
TCF4-236ENST00000567880 IGHMBP2P38935 993 aaKnown RBP12.8□□□□□ -0.36
TCF4-236ENST00000567880 TNNI3KQ59H18 835 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 BMP2KLQ5H9B9 411 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 PDGFDQ9GZP0 370 aaPredicted RBP12.8□□□□□ -0.36
TCF4-236ENST00000567880 TLR7Q9NYK1 1049 aaKnown RBP12.8□□□□□ -0.36
TCF4-236ENST00000567880 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
TCF4-236ENST00000567880 FPGT-TNNI3KV9GXZ4 949 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 RTL9Q8NET4 1388 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 A0A1B0GUL6 1792 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 METTL24Q5JXM2 366 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
TCF4-236ENST00000567880 OSBPL3Q9H4L5 887 aa12.8□□□□□ -0.36
TCF4-236ENST00000567880 RIC1Q4ADV7 1423 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 GPATCH3Q96I76 525 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 NEUROD6Q96NK8 337 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 STAP2Q9UGK3 403 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 RIPOR2Q9Y4F9 1068 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 PARP3Q9Y6F1 533 aa12.79□□□□□ -0.36
TCF4-236ENST00000567880 TIMM10P62072 90 aa12.78□□□□□ -0.36
TCF4-236ENST00000567880 SPOCK2Q92563 424 aa12.78□□□□□ -0.36
TCF4-236ENST00000567880 UPF1Q92900 1129 aaKnown RBP eCLIP12.78□□□□□ -0.36
TCF4-236ENST00000567880 BACH2Q9BYV9 841 aa12.78□□□□□ -0.36
TCF4-236ENST00000567880 ZNF609O15014 1411 aa12.78□□□□□ -0.36
TCF4-236ENST00000567880 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
TCF4-236ENST00000567880 DDX46Q7L014 1031 aaKnown RBP12.78□□□□□ -0.36
TCF4-236ENST00000567880 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
TCF4-236ENST00000567880 CELF1Q92879 486 aaKnown RBP12.78□□□□□ -0.36
TCF4-236ENST00000567880 ECHDC1Q9NTX5 307 aa12.78□□□□□ -0.36
TCF4-236ENST00000567880 DBNLQ9UJU6 430 aaKnown RBP12.78□□□□□ -0.36
TCF4-236ENST00000567880 AOX1Q06278 1338 aa12.77□□□□□ -0.36
TCF4-236ENST00000567880 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.36
TCF4-236ENST00000567880 A0A1B0GUL7 405 aa12.77□□□□□ -0.37
TCF4-236ENST00000567880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
TCF4-236ENST00000567880 PI4K2BQ8TCG2 481 aa12.77□□□□□ -0.37
TCF4-236ENST00000567880 DBNDD2Q9BQY9 259 aa12.77□□□□□ -0.37
TCF4-236ENST00000567880 TRIM6-TRIM34B2RNG4 842 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 ERC2O15083 957 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
TCF4-236ENST00000567880 SDSP20132 328 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 RPGRQ92834 1020 aaKnown RBP12.76□□□□□ -0.37
TCF4-236ENST00000567880 RILPL2Q969X0 211 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 GPR108Q9NPR9 543 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 AKAP2Q9Y2D5 859 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 MROH5Q6ZUA9 1318 aa12.76□□□□□ -0.37
TCF4-236ENST00000567880 ARAP2Q8WZ64 1704 aa12.75□□□□□ -0.37
TCF4-236ENST00000567880 TAF5LO75529 589 aa12.75□□□□□ -0.37
TCF4-236ENST00000567880 GLRX3O76003 335 aaKnown RBP12.75□□□□□ -0.37
TCF4-236ENST00000567880 PDE8BO95263 885 aa12.75□□□□□ -0.37
TCF4-236ENST00000567880 RPS8P62241 208 aaKnown RBP12.75□□□□□ -0.37
TCF4-236ENST00000567880 CHRNDQ07001 517 aa12.75□□□□□ -0.37
TCF4-236ENST00000567880 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
TCF4-236ENST00000567880 VGLL2Q8N8G2 317 aa12.75□□□□□ -0.37
TCF4-236ENST00000567880 COL11A2P13942 1736 aaPredicted RBP12.75□□□□□ -0.37
TCF4-236ENST00000567880 ADORA1P30542 326 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 BOLA2Q9H3K6 86 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 BSDC1Q9NW68 430 aaPredicted RBP12.74□□□□□ -0.37
TCF4-236ENST00000567880 SNAP23O00161 211 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 PUM3Q15397 648 aaKnown RBP12.74□□□□□ -0.37
TCF4-236ENST00000567880 CRY2Q49AN0 593 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 XAGE2Q96GT9 111 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 BRIP1Q9BX63 1249 aa12.74□□□□□ -0.37
TCF4-236ENST00000567880 CDC45O75419 566 aa12.73□□□□□ -0.37
TCF4-236ENST00000567880 PDIA4P13667 645 aaKnown RBP12.73□□□□□ -0.37
TCF4-236ENST00000567880 GRAPQ13588 217 aa12.73□□□□□ -0.37
TCF4-236ENST00000567880 GRAPLQ8TC17 118 aaPredicted RBP12.73□□□□□ -0.37
TCF4-236ENST00000567880 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
TCF4-236ENST00000567880 SEC24BO95487 1268 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
TCF4-236ENST00000567880 TBC1D9Q6ZT07 1266 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 SLC5A1P13866 664 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 PDE6BP35913 854 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 CCDC158Q5M9N0 1113 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 CNTROBQ8N137 903 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
TCF4-236ENST00000567880 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.37
TCF4-236ENST00000567880 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
TCF4-236ENST00000567880 ATP5JP18859 108 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms