RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	MIS18A	Q9NYP9	233 aa		18.32	■□□□□ 0.52
SMG1-213	ENST00000567737	TRIM17	Q9Y577	477 aa		18.32	■□□□□ 0.52
SMG1-213	ENST00000567737	C6orf229	H3BNL8	230 aa		18.31	■□□□□ 0.52
SMG1-213	ENST00000567737	SCARF1	Q14162	830 aa		18.31	■□□□□ 0.52
SMG1-213	ENST00000567737	MOB2	Q70IA6	237 aa		18.31	■□□□□ 0.52
SMG1-213	ENST00000567737	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.31	■□□□□ 0.52
SMG1-213	ENST00000567737	RTL9	Q8NET4	1388 aa		18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	UBE2Q2L	H0YL09	131 aa		18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	HTATSF1	O43719	755 aa	Known RBP	18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	HCLS1	P14317	486 aa	Predicted RBP	18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	MKRN3	Q13064	507 aa	Known RBP	18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	TTLL12	Q14166	644 aa	Predicted RBP	18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	DOK7	Q18PE1	504 aa		18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	EYA3	Q99504	573 aa		18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	KCNQ5	Q9NR82	932 aa		18.3	■□□□□ 0.52
SMG1-213	ENST00000567737	SLC17A8	Q8NDX2	589 aa		18.29	■□□□□ 0.52
SMG1-213	ENST00000567737	PNISR	Q8TF01	805 aa	Known RBP	18.29	■□□□□ 0.52
SMG1-213	ENST00000567737	ANKRD36C	Q5JPF3	1778 aa		18.28	■□□□□ 0.52
SMG1-213	ENST00000567737	VIL1	P09327	827 aa	Known RBP	18.28	■□□□□ 0.52
SMG1-213	ENST00000567737	EN2	P19622	333 aa	Predicted RBP	18.28	■□□□□ 0.52
SMG1-213	ENST00000567737	PITPNM2	Q9BZ72	1349 aa		18.27	■□□□□ 0.52
SMG1-213	ENST00000567737	ALDH1A1	P00352	501 aa		18.27	■□□□□ 0.52
SMG1-213	ENST00000567737	OTOP1	Q7RTM1	612 aa		18.27	■□□□□ 0.52
SMG1-213	ENST00000567737	R3HDML	Q9H3Y0	253 aa		18.27	■□□□□ 0.52
SMG1-213	ENST00000567737	POLL	Q9UGP5	575 aa		18.27	■□□□□ 0.52
SMG1-213	ENST00000567737	LRRC37A	A6NMS7	1700 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	ERBB4	Q15303	1308 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737		G3V3G9	751 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	NF2	P35240	595 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	ZNF280A	P59817	542 aa	Predicted RBP	18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	TCIRG1	Q13488	830 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	DCAF8	Q5TAQ9	597 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	CFAP53	Q96M91	514 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	NUDC	Q9Y266	331 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	LAMB2	P55268	1798 aa		18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	DDX60	Q8IY21	1712 aa	Known RBP	18.26	■□□□□ 0.51
SMG1-213	ENST00000567737	RBBP6	Q7Z6E9	1792 aa	Known RBP	18.25	■□□□□ 0.51
SMG1-213	ENST00000567737	EIF4A1	P60842	406 aa	Known RBP	18.25	■□□□□ 0.51
SMG1-213	ENST00000567737	HSP90AB3P	Q58FF7	597 aa		18.25	■□□□□ 0.51
SMG1-213	ENST00000567737	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.25	■□□□□ 0.51
SMG1-213	ENST00000567737	TRMT112	Q9UI30	125 aa	Known RBP	18.25	■□□□□ 0.51
SMG1-213	ENST00000567737	SH3TC1	Q8TE82	1336 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	GPSM2	P81274	684 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	CNGB1	Q14028	1251 aa	Predicted RBP	18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	NLRP10	Q86W26	655 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	AGBL3	Q8NEM8	1001 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	TMEM106C	Q9BVX2	250 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	MYOZ2	Q9NPC6	264 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	PTPN22	Q9Y2R2	807 aa		18.24	■□□□□ 0.51
SMG1-213	ENST00000567737	PER1	O15534	1290 aa	Predicted RBP	18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	PRAMEF18	Q5VWM3	479 aa		18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	NECTIN2	Q92692	538 aa		18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	ARMC5	Q96C12	935 aa		18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	SCAF8	Q9UPN6	1271 aa	Known RBP	18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	HTT	P42858	3142 aa		18.23	■□□□□ 0.51
SMG1-213	ENST00000567737	TBC1D16	Q8TBP0	767 aa		18.22	■□□□□ 0.51
SMG1-213	ENST00000567737	CELF1	Q92879	486 aa	Known RBP	18.22	■□□□□ 0.51
SMG1-213	ENST00000567737	ERO1A	Q96HE7	468 aa		18.22	■□□□□ 0.51
SMG1-213	ENST00000567737	THUMPD2	Q9BTF0	503 aa	Known RBP	18.22	■□□□□ 0.51
SMG1-213	ENST00000567737	ZNF609	O15014	1411 aa		18.22	■□□□□ 0.51
SMG1-213	ENST00000567737	USP17L8	P0C7I0	530 aa		18.21	■□□□□ 0.51
SMG1-213	ENST00000567737	TAF1	P21675	1872 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737	KDM3B	Q7LBC6	1761 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737		H0YGN5	161 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737	SPRYD7	Q5W111	196 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737	ARMC9	Q7Z3E5	817 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737	OTUD5	Q96G74	571 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737	FBXO3	Q9UK99	471 aa		18.2	■□□□□ 0.5
SMG1-213	ENST00000567737	MANSC4	A6NHS7	340 aa	Predicted RBP	18.19	■□□□□ 0.5
SMG1-213	ENST00000567737	INHBE	P58166	350 aa		18.19	■□□□□ 0.5
SMG1-213	ENST00000567737	PTPN12	Q05209	780 aa	Known RBP	18.19	■□□□□ 0.5
SMG1-213	ENST00000567737	LRP10	Q7Z4F1	713 aa		18.19	■□□□□ 0.5
SMG1-213	ENST00000567737	IFNL1	Q8IU54	200 aa		18.19	■□□□□ 0.5
SMG1-213	ENST00000567737	CHRDL2	Q6WN34	429 aa		18.18	■□□□□ 0.5
SMG1-213	ENST00000567737	CD99L2	Q8TCZ2	262 aa		18.18	■□□□□ 0.5
SMG1-213	ENST00000567737	EFCC1	Q9HA90	598 aa		18.18	■□□□□ 0.5
SMG1-213	ENST00000567737	SCN9A	Q15858	1988 aa		18.18	■□□□□ 0.5
SMG1-213	ENST00000567737	EIF2S2	P20042	333 aa	Known RBP	18.17	■□□□□ 0.5
SMG1-213	ENST00000567737	KIAA0100	Q14667	2235 aa	Known RBP	18.17	■□□□□ 0.5
SMG1-213	ENST00000567737	CENPF	P49454	3210 aa		18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	UFL1	O94874	794 aa		18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	AIMP1	Q12904	312 aa	Known RBP	18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	PRKG1	Q13976	671 aa		18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	PDIA6	Q15084	440 aa		18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	SF3B3	Q15393	1217 aa	Known RBP	18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	SLC4A8	Q2Y0W8	1093 aa		18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	GML	Q99445	158 aa		18.16	■□□□□ 0.5
SMG1-213	ENST00000567737	ANXA1	P04083	346 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	NEFM	P07197	916 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	NBPF9	Q3BBW0	867 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	COPS6	Q7L5N1	327 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	NBPF11	Q86T75	865 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	ZNF333	Q96JL9	665 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	PODXL2	Q9NZ53	605 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	ANKIB1	Q9P2G1	1089 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	GGA1	Q9UJY5	639 aa		18.15	■□□□□ 0.5
SMG1-213	ENST00000567737	USP17L3	A6NCW0	530 aa		18.14	■□□□□ 0.49

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