RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 PGAP2Q9UHJ9 254 aa12.92□□□□□ -0.34
HMGN2P40-201ENST00000566875 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 UFL1O94874 794 aa12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 RPS12P25398 132 aaKnown RBP12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 DEFB115Q30KQ5 88 aa12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 UBE3BQ7Z3V4 1068 aa12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 PLA2G12BQ9BX93 195 aa12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 DBNDD1Q9H9R9 158 aa12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
HMGN2P40-201ENST00000566875 PCNTO95613 3336 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 PSMD14O00487 310 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 ECE2O60344 883 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 CSF1RP07333 972 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 VIL1P09327 827 aaKnown RBP12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 GREM2Q9H772 168 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
HMGN2P40-201ENST00000566875 XDHP47989 1333 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 CDC37L1Q7L3B6 337 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 PODNQ7Z5L7 613 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 MPHOSPH8Q99549 860 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 KCNQ5Q9NR82 932 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 COL4A5P29400 1685 aa12.89□□□□□ -0.35
HMGN2P40-201ENST00000566875 HIRAP54198 1017 aaPredicted RBP12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 CASP7P55210 303 aa12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 BEND3Q5T5X7 828 aa12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 ABT1Q9ULW3 272 aaKnown RBP12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 LEMD3Q9Y2U8 911 aa12.88□□□□□ -0.35
HMGN2P40-201ENST00000566875 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 RASSF10A6NK89 507 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 E9PSI1 815 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 F6X3S4 739 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 ITGA6P23229 1130 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 VEGFBP49765 207 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 CST9Q5W186 159 aa12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 GPR101Q96P66 508 aaPredicted RBP12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
HMGN2P40-201ENST00000566875 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 ALDH1L1O75891 902 aa12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 HSPA1AP0DMV8 641 aaKnown RBP12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 HSPA1BP0DMV9 641 aaKnown RBP12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 CCT4P50991 539 aaKnown RBP12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 RBM26Q5T8P6 1007 aaKnown RBP12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 SAMD7Q7Z3H4 446 aa12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 AGBL3Q8NEM8 1001 aa12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 ZNF521Q96K83 1311 aa12.86□□□□□ -0.35
HMGN2P40-201ENST00000566875 USP17L3A6NCW0 530 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 USP17L4A6NCW7 530 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 TRAF5O00463 557 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 KCNA4P22459 653 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 ECE1P42892 770 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 IFIT5Q13325 482 aaKnown RBP12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 RSBN1LQ6PCB5 846 aaPredicted RBP12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 SLC4A10Q6U841 1118 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 USP17L1Q7RTZ2 530 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 USP48Q86UV5 1035 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 DCPSQ96C86 337 aaKnown RBP12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 SRCIN1Q9C0H9 1055 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 TAF1P21675 1872 aa12.85□□□□□ -0.35
HMGN2P40-201ENST00000566875 CCER2I3L3R5 266 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 GRM8O00222 908 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 CELF2O95319 508 aaKnown RBP12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 MMP14P50281 582 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 FOXO4P98177 505 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 SLFN5Q08AF3 891 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 TBC1D10BQ4KMP7 808 aaPredicted RBP12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 TRPM4Q8TD43 1214 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 GLIS2Q9BZE0 524 aaPredicted RBP12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 COA1Q9GZY4 146 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 WDR33Q9C0J8 1336 aaKnown RBP12.84□□□□□ -0.35
HMGN2P40-201ENST00000566875 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 WTIPA6NIX2 430 aaPredicted RBP12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 USP17L8P0C7I0 530 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 KCNJ4P48050 445 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 MAP2K1Q02750 393 aaPredicted RBP12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 COL13A1Q5TAT6 717 aaPredicted RBP12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 LMBR1LQ6UX01 489 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 AIDAQ96BJ3 306 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 CHMP3Q9Y3E7 222 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 LAMB2P55268 1798 aa12.83□□□□□ -0.36
HMGN2P40-201ENST00000566875 ZNF280AP59817 542 aaPredicted RBP12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 TAF7LQ5H9L4 462 aa12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 STRIP1Q5VSL9 837 aa12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 KRT26Q7Z3Y9 468 aa12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
HMGN2P40-201ENST00000566875 GMLQ99445 158 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms