RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 SRPK1Q96SB4 655 aaKnown RBP8.3□□□□□ -1.08
KARS-208ENST00000566772 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
KARS-208ENST00000566772 KLF4O43474 513 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 MARCH6O60337 910 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 CTC1Q2NKJ3 1217 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 SPRYD7Q5W111 196 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 NLRP13Q86W25 1043 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 MEIOBQ8N635 442 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 KCNB2Q92953 911 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
KARS-208ENST00000566772 POLMQ9NP87 494 aaPredicted RBP8.29□□□□□ -1.08
KARS-208ENST00000566772 PKD2L1Q9P0L9 805 aa8.29□□□□□ -1.08
KARS-208ENST00000566772 hCG_2014768A0A024R1R8 64 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 FBXO24O75426 580 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 CYP2E1P05181 493 aaPredicted RBP8.28□□□□□ -1.08
KARS-208ENST00000566772 CTSOP43234 321 aaPredicted RBP8.28□□□□□ -1.08
KARS-208ENST00000566772 SOX9P48436 509 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 VEGFBP49765 207 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 TYRO3Q06418 890 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 TTC39BQ5VTQ0 682 aaPredicted RBP8.28□□□□□ -1.08
KARS-208ENST00000566772 PEAR1Q5VY43 1037 aaPredicted RBP8.28□□□□□ -1.08
KARS-208ENST00000566772 FBXL19Q6PCT2 694 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 CEP63Q96MT8 703 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 TRIM55Q9BYV6 548 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 HCSTQ9UBK5 93 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 AKAP2Q9Y2D5 859 aa8.28□□□□□ -1.08
KARS-208ENST00000566772 EGFRP00533 1210 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 EPB42P16452 691 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 FAM160A1Q05DH4 1040 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 RAB33AQ14088 237 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 ZNF697Q5TEC3 545 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 PRICKLE2Q7Z3G6 844 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 MICAL1Q8TDZ2 1067 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
KARS-208ENST00000566772 NT5C1AQ9BXI3 368 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 OXCT2Q9BYC2 517 aaPredicted RBP8.27□□□□□ -1.09
KARS-208ENST00000566772 KANSL3Q9P2N6 904 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 BICRAQ9NZM4 1560 aa8.27□□□□□ -1.09
KARS-208ENST00000566772 A0A1W2PNR3 127 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 FAM221BA6H8Z2 402 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 ENPP3O14638 875 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 SPINT1O43278 529 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 MSX1P28360 303 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 RNF187Q5TA31 235 aaPredicted RBP8.26□□□□□ -1.09
KARS-208ENST00000566772 PHC3Q8NDX5 983 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 CPLX3Q8WVH0 158 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 TSEN34Q9BSV6 310 aaKnown RBP8.26□□□□□ -1.09
KARS-208ENST00000566772 SNTG2Q9NY99 539 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 UBP1Q9NZI7 540 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 STRIP2Q9ULQ0 834 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 TLR6Q9Y2C9 796 aa8.26□□□□□ -1.09
KARS-208ENST00000566772 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 U2SURPO15042 1029 aaKnown RBP8.25□□□□□ -1.09
KARS-208ENST00000566772 GREM1O60565 184 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 RGS20O76081 388 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 PF4P02776 101 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 IBSPP21815 317 aaPredicted RBP8.25□□□□□ -1.09
KARS-208ENST00000566772 GARTP22102 1010 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 SV2BQ7L1I2 683 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 RHOVQ96L33 236 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 KCNQ5Q9NR82 932 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 SALL4Q9UJQ4 1053 aa8.25□□□□□ -1.09
KARS-208ENST00000566772 SASH3O75995 380 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 EDN3P14138 238 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 PRPF40BQ6NWY9 871 aaKnown RBP8.24□□□□□ -1.09
KARS-208ENST00000566772 DTHD1Q6ZMT9 781 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 FILIP1Q7Z7B0 1213 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 ANKRD24Q8TF21 1146 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 DEPDC7Q96QD5 511 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 ZCCHC2Q9C0B9 1178 aaKnown RBP8.24□□□□□ -1.09
KARS-208ENST00000566772 ABCB6Q9NP58 842 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 IFT57Q9NWB7 429 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 PRKAG3Q9UGI9 489 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 PPM1HQ9ULR3 514 aa8.24□□□□□ -1.09
KARS-208ENST00000566772 NOP58Q9Y2X3 529 aaKnown RBP8.24□□□□□ -1.09
KARS-208ENST00000566772 SUPT16HQ9Y5B9 1047 aaKnown RBP8.24□□□□□ -1.09
KARS-208ENST00000566772 TTC24A2A3L6 582 aaPredicted RBP8.23□□□□□ -1.09
KARS-208ENST00000566772 CCDC85CA6NKD9 419 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 RLBP1P12271 317 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 RHOQP17081 205 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 LIG3P49916 1009 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 ANAPC15P60006 121 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 COL9A2Q14055 689 aaPredicted RBP8.23□□□□□ -1.09
KARS-208ENST00000566772 RASA3Q14644 834 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 WDR44Q5JSH3 913 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 PCNX4Q63HM2 1172 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 TPTE2Q6XPS3 522 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 ZNF598Q86UK7 904 aaKnown RBP8.23□□□□□ -1.09
KARS-208ENST00000566772 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 BRINP2Q9C0B6 783 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 TIMMDC1Q9NPL8 285 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 GJA3Q9Y6H8 435 aa8.23□□□□□ -1.09
KARS-208ENST00000566772 CELA3AP09093 270 aa8.22□□□□□ -1.09
KARS-208ENST00000566772 CAMK2GQ13555 558 aaPredicted RBP8.22□□□□□ -1.09
KARS-208ENST00000566772 NOL8Q76FK4 1167 aaKnown RBP8.22□□□□□ -1.09
KARS-208ENST00000566772 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms