RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 TMEM88BA6NKF7 163 aa12.34□□□□□ -0.43
CFDP1-206ENST00000566254 WNT7BP56706 349 aa12.34□□□□□ -0.43
CFDP1-206ENST00000566254 AEBP1Q8IUX7 1158 aa12.34□□□□□ -0.43
CFDP1-206ENST00000566254 DDX54Q8TDD1 881 aaKnown RBP12.34□□□□□ -0.43
CFDP1-206ENST00000566254 SYTL4Q96C24 671 aaPredicted RBP12.34□□□□□ -0.43
CFDP1-206ENST00000566254 EVC2Q86UK5 1308 aa12.34□□□□□ -0.43
CFDP1-206ENST00000566254 FAM196BA6NMK8 535 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 ESPNB1AK53 854 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 ATP5J2-PTCD1G3V325 749 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 RPIAP49247 311 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 EML3Q32P44 896 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 ANKRD24Q8TF21 1146 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 CDV3Q9UKY7 258 aaKnown RBP12.33□□□□□ -0.44
CFDP1-206ENST00000566254 ZMIZ1Q9ULJ6 1067 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 DOLKQ9UPQ8 538 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
CFDP1-206ENST00000566254 VARSP26640 1264 aaKnown RBP12.32□□□□□ -0.44
CFDP1-206ENST00000566254 CRTC2Q53ET0 693 aaPredicted RBP12.32□□□□□ -0.44
CFDP1-206ENST00000566254 COL23A1Q86Y22 540 aaPredicted RBP12.32□□□□□ -0.44
CFDP1-206ENST00000566254 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L15C9J2P7 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L13C9JLJ4 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L12C9JPN9 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L11C9JVI0 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L21D6R901 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L18D6R9N7 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L22D6RA61 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L17D6RBQ6 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L19D6RCP7 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L20D6RJB6 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 RASA1P20936 1047 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 USP17L24Q0WX57 530 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.31□□□□□ -0.44
CFDP1-206ENST00000566254 SIN3AQ96ST3 1273 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 CCNL1Q9UK58 526 aaPredicted RBP12.31□□□□□ -0.44
CFDP1-206ENST00000566254 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
CFDP1-206ENST00000566254 NOVA2Q9UNW9 492 aaKnown RBP12.31□□□□□ -0.44
CFDP1-206ENST00000566254 NSD2O96028 1365 aa12.3□□□□□ -0.44
CFDP1-206ENST00000566254 PTK7Q13308 1070 aa12.3□□□□□ -0.44
CFDP1-206ENST00000566254 NME9Q86XW9 330 aa12.3□□□□□ -0.44
CFDP1-206ENST00000566254 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
CFDP1-206ENST00000566254 TMEM164Q5U3C3 297 aa12.29□□□□□ -0.44
CFDP1-206ENST00000566254 STK32AQ8WU08 396 aa12.29□□□□□ -0.44
CFDP1-206ENST00000566254 L3MBTL2Q969R5 705 aa12.29□□□□□ -0.44
CFDP1-206ENST00000566254 NOD1Q9Y239 953 aa12.29□□□□□ -0.44
CFDP1-206ENST00000566254 CD2APQ9Y5K6 639 aa12.29□□□□□ -0.44
CFDP1-206ENST00000566254 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
CFDP1-206ENST00000566254 BRD1O95696 1058 aa12.28□□□□□ -0.44
CFDP1-206ENST00000566254 OXLD1Q5BKU9 147 aa12.28□□□□□ -0.44
CFDP1-206ENST00000566254 KCTD15Q96SI1 283 aaPredicted RBP12.28□□□□□ -0.44
CFDP1-206ENST00000566254 LY75O60449 1722 aa12.28□□□□□ -0.44
CFDP1-206ENST00000566254 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
CFDP1-206ENST00000566254 TRIM50Q86XT4 487 aa12.27□□□□□ -0.45
CFDP1-206ENST00000566254 OGFOD1Q8N543 542 aa12.27□□□□□ -0.45
CFDP1-206ENST00000566254 LTV1Q96GA3 475 aaPredicted RBP12.27□□□□□ -0.45
CFDP1-206ENST00000566254 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.45
CFDP1-206ENST00000566254 DOT1LQ8TEK3 1739 aa12.27□□□□□ -0.45
CFDP1-206ENST00000566254 LTN1O94822 1766 aa12.27□□□□□ -0.45
CFDP1-206ENST00000566254 CLDN10P78369 228 aa12.26□□□□□ -0.45
CFDP1-206ENST00000566254 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
CFDP1-206ENST00000566254 EMID1Q96A84 441 aaPredicted RBP12.26□□□□□ -0.45
CFDP1-206ENST00000566254 PCDHB11Q9Y5F2 797 aa12.26□□□□□ -0.45
CFDP1-206ENST00000566254 MMRN1Q13201 1228 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
CFDP1-206ENST00000566254 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 EHBP1Q8NDI1 1231 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 IGSF1Q8N6C5 1336 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 USP47Q96K76 1375 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 SBNO2Q9Y2G9 1366 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 MON2Q7Z3U7 1717 aa12.25□□□□□ -0.45
CFDP1-206ENST00000566254 ROCK2O75116 1388 aaKnown RBP12.24□□□□□ -0.45
CFDP1-206ENST00000566254 ATP1A2P50993 1020 aa12.24□□□□□ -0.45
CFDP1-206ENST00000566254 USP54Q70EL1 1684 aa12.24□□□□□ -0.45
CFDP1-206ENST00000566254 VASH1Q7L8A9 365 aaPredicted RBP12.24□□□□□ -0.45
CFDP1-206ENST00000566254 ANKMY2Q8IV38 441 aa12.24□□□□□ -0.45
CFDP1-206ENST00000566254 DNAAF2Q9NVR5 837 aaKnown RBP12.24□□□□□ -0.45
CFDP1-206ENST00000566254 CD163L1Q9NR16 1453 aa12.23□□□□□ -0.45
CFDP1-206ENST00000566254 INTS6LQ5JSJ4 861 aaKnown RBP12.23□□□□□ -0.45
CFDP1-206ENST00000566254 LARGE2Q8N3Y3 721 aa12.23□□□□□ -0.45
CFDP1-206ENST00000566254 FAM200AQ8TCP9 573 aa12.23□□□□□ -0.45
CFDP1-206ENST00000566254 IP6K1Q92551 441 aa12.23□□□□□ -0.45
CFDP1-206ENST00000566254 MEGF6O75095 1541 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 ZBTB7BO15156 539 aaPredicted RBP12.22□□□□□ -0.45
CFDP1-206ENST00000566254 RAB15P59190 212 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 GTF2IP78347 998 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 KCNA1Q09470 495 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 DPYDQ12882 1025 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 USP4Q13107 963 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
CFDP1-206ENST00000566254 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 ZCRB1Q8TBF4 217 aaKnown RBP12.22□□□□□ -0.45
CFDP1-206ENST00000566254 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
CFDP1-206ENST00000566254 CDK15Q96Q40 435 aa12.22□□□□□ -0.45
CFDP1-206ENST00000566254 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
CFDP1-206ENST00000566254 SMIM5Q71RC9 77 aa12.21□□□□□ -0.45
CFDP1-206ENST00000566254 KIAA1024Q9UPX6 916 aa12.21□□□□□ -0.45
CFDP1-206ENST00000566254 PCDHGA11Q9Y5H2 935 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms