RNA–Protein interactions for RNA: ENST00000566225.1

LINC01254-201, Transcript of long intergenic non-protein coding RNA 1254, humanhuman

BASIC

Gene LINC01254, Length 2,908 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01254-201ENST00000566225 PPP1R13BQ96KQ4 1090 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 NCOA5Q9HCD5 579 aaKnown RBP14.03□□□□□ -0.16
LINC01254-201ENST00000566225 IFNKQ9P0W0 207 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 RCOR1Q9UKL0 485 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 SETD1AO15047 1707 aaKnown RBP14.03□□□□□ -0.16
LINC01254-201ENST00000566225 A0A1B0GVL5 298 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 CLCN6P51797 869 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 BMS1Q14692 1282 aaKnown RBP14.03□□□□□ -0.16
LINC01254-201ENST00000566225 KAZALD1Q96I82 304 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 DNAJC2Q99543 621 aaKnown RBP14.03□□□□□ -0.16
LINC01254-201ENST00000566225 FAM53CQ9NYF3 392 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 DBF4Q9UBU7 674 aaPredicted RBP14.03□□□□□ -0.16
LINC01254-201ENST00000566225 MED23Q9ULK4 1368 aa14.03□□□□□ -0.16
LINC01254-201ENST00000566225 AKAP12Q02952 1782 aa14.02□□□□□ -0.16
LINC01254-201ENST00000566225 FAM160A1Q05DH4 1040 aa14.02□□□□□ -0.16
LINC01254-201ENST00000566225 XPO4Q9C0E2 1151 aaKnown RBP14.02□□□□□ -0.16
LINC01254-201ENST00000566225 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.16
LINC01254-201ENST00000566225 NRXN3Q9Y4C0 1643 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 PTPDC1A2A3K4 754 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 GRM8O00222 908 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 POLR3GO15318 223 aaPredicted RBP14.02□□□□□ -0.17
LINC01254-201ENST00000566225 CYP21A2P08686 494 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 GSDMDP57764 484 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 APOBRQ0VD83 1088 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 KRT32Q14532 448 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 ABTB2Q8N961 1025 aa14.02□□□□□ -0.17
LINC01254-201ENST00000566225 NAT10Q9H0A0 1025 aaKnown RBP14.02□□□□□ -0.17
LINC01254-201ENST00000566225 ALDH8A1Q9H2A2 487 aaPredicted RBP14.02□□□□□ -0.17
LINC01254-201ENST00000566225 DPCR1Q3MIW9 517 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 SLFNL1Q499Z3 407 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 ISM2Q6H9L7 571 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 ARMCX5Q6P1M9 558 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 KSR2Q6VAB6 950 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 ALDH1L1O75891 902 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 SFPQP23246 707 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC01254-201ENST00000566225 NSUN7Q8NE18 718 aaKnown RBP14.01□□□□□ -0.17
LINC01254-201ENST00000566225 SNRKQ9NRH2 765 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 DNAI1Q9UI46 699 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 COL15A1P39059 1388 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 KIF2AO00139 706 aaPredicted RBP14.01□□□□□ -0.17
LINC01254-201ENST00000566225 CYB5RLQ6IPT4 315 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 RICTORQ6R327 1708 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 ENGASEQ8NFI3 743 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 FHOD1Q9Y613 1164 aa14.01□□□□□ -0.17
LINC01254-201ENST00000566225 H2AFXP16104 143 aaPredicted RBP14□□□□□ -0.17
LINC01254-201ENST00000566225 CHST3Q7LGC8 479 aa14□□□□□ -0.17
LINC01254-201ENST00000566225 CALCOCO1Q9P1Z2 691 aa14□□□□□ -0.17
LINC01254-201ENST00000566225 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
LINC01254-201ENST00000566225 TSGA10IPQ3SY00 556 aa14□□□□□ -0.17
LINC01254-201ENST00000566225 ZNF396Q96N95 335 aaPredicted RBP14□□□□□ -0.17
LINC01254-201ENST00000566225 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14□□□□□ -0.17
LINC01254-201ENST00000566225 CTDNEP1O95476 244 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 PNMA6AP0CW24 399 aaPredicted RBP13.99□□□□□ -0.17
LINC01254-201ENST00000566225 OTUD7BQ6GQQ9 843 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
LINC01254-201ENST00000566225 STOX1Q6ZVD7 989 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
LINC01254-201ENST00000566225 L2HGDHQ9H9P8 463 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 PCDHA7Q9UN72 937 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 LTKP29376 864 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 NDUFA8P51970 172 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 PTPN21Q16825 1174 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 NBPF6Q5VWK0 638 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 FAM177A1Q8N128 213 aaPredicted RBP13.99□□□□□ -0.17
LINC01254-201ENST00000566225 UBXN4Q92575 508 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 NBPF4Q96M43 638 aa13.99□□□□□ -0.17
LINC01254-201ENST00000566225 OSBPL5Q9H0X9 879 aaPredicted RBP13.99□□□□□ -0.17
LINC01254-201ENST00000566225 HOXB7P09629 217 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 LMOD1P29536 600 aaPredicted RBP13.98□□□□□ -0.17
LINC01254-201ENST00000566225 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 HNRNPH2P55795 449 aaKnown RBP13.98□□□□□ -0.17
LINC01254-201ENST00000566225 SMARCC2Q8TAQ2 1214 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
LINC01254-201ENST00000566225 EPC1Q9H2F5 836 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 SEC31AO94979 1220 aaKnown RBP13.98□□□□□ -0.17
LINC01254-201ENST00000566225 USPL1Q5W0Q7 1092 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 NAA16Q6N069 864 aaPredicted RBP13.98□□□□□ -0.17
LINC01254-201ENST00000566225 PLPPR3Q6T4P5 718 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 AMOTL2Q9Y2J4 779 aa13.98□□□□□ -0.17
LINC01254-201ENST00000566225 PFKFB2O60825 505 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 URI1O94763 535 aaPredicted RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 POLR3DP05423 398 aaPredicted RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 TMCO3Q6UWJ1 677 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 MNS1Q8NEH6 495 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 LINS1Q8NG48 757 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 DBNLQ9UJU6 430 aaKnown RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 A0A0G2JLW4 131 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 NRDCO43847 1150 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 CYP2C19P33261 490 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 FAM69CQ0P6D2 419 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 EPHA10Q5JZY3 1008 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 FMR1NBQ8N0W7 255 aaPredicted RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 NEK11Q8NG66 645 aa13.97□□□□□ -0.17
LINC01254-201ENST00000566225 LRRC59Q96AG4 307 aaKnown RBP13.97□□□□□ -0.17
LINC01254-201ENST00000566225 TMX1Q9H3N1 280 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms