RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 RASSF10A6NK89 507 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 H7C1W4 665 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 CELF2O95319 508 aaKnown RBP8.19□□□□□ -1.1
TCF4-228ENST00000565393 ATP2B4P23634 1241 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 CTSWP56202 376 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 FLIIQ13045 1269 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 TBC1D10BQ4KMP7 808 aaPredicted RBP8.19□□□□□ -1.1
TCF4-228ENST00000565393 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 UBE3BQ7Z3V4 1068 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 TTLL11Q8NHH1 800 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 ZC3H15Q8WU90 426 aaKnown RBP8.19□□□□□ -1.1
TCF4-228ENST00000565393 DCPSQ96C86 337 aaKnown RBP8.19□□□□□ -1.1
TCF4-228ENST00000565393 GLIS2Q9BZE0 524 aaPredicted RBP8.19□□□□□ -1.1
TCF4-228ENST00000565393 MYH16Q9H6N6 1097 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 WDR33Q9C0J8 1336 aaKnown RBP8.19□□□□□ -1.1
TCF4-228ENST00000565393 CNTNAP1P78357 1384 aa8.19□□□□□ -1.1
TCF4-228ENST00000565393 GOLGB1Q14789 3259 aaKnown RBP8.18□□□□□ -1.1
TCF4-228ENST00000565393 TIAM2Q8IVF5 1701 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 SHTN1A0MZ66 631 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 NEURL1BA8MQ27 555 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 FOXN1O15353 648 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 RPS12P25398 132 aaKnown RBP8.18□□□□□ -1.1
TCF4-228ENST00000565393 IGHMBP2P38935 993 aaKnown RBP8.18□□□□□ -1.1
TCF4-228ENST00000565393 ECE1P42892 770 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 MAP2K1Q02750 393 aaPredicted RBP8.18□□□□□ -1.1
TCF4-228ENST00000565393 GCKRQ14397 625 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 TRPM4Q8TD43 1214 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 DNAAF4Q8WXU2 420 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 BEGAINQ9BUH8 593 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 GREM2Q9H772 168 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 BSDC1Q9NW68 430 aaPredicted RBP8.18□□□□□ -1.1
TCF4-228ENST00000565393 PGAP2Q9UHJ9 254 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 MINPP1Q9UNW1 487 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 CDHR2Q9BYE9 1310 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 COL4A5P29400 1685 aa8.18□□□□□ -1.1
TCF4-228ENST00000565393 NUP98P52948 1817 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 WTIPA6NIX2 430 aaPredicted RBP8.17□□□□□ -1.1
TCF4-228ENST00000565393 VIL1P09327 827 aaKnown RBP8.17□□□□□ -1.1
TCF4-228ENST00000565393 CTCFP49711 727 aaPredicted RBP8.17□□□□□ -1.1
TCF4-228ENST00000565393 CYP4F22Q6NT55 531 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 LINS1Q8NG48 757 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 FBXW7Q969H0 707 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 CAPNS2Q96L46 248 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 CHMP3Q9Y3E7 222 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 XDHP47989 1333 aa8.17□□□□□ -1.1
TCF4-228ENST00000565393 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 F6X3S4 739 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 ITGA6P23229 1130 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 KCNJ4P48050 445 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
TCF4-228ENST00000565393 LBX1P52954 281 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 CCDC88AQ3V6T2 1871 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 RSBN1LQ6PCB5 846 aaPredicted RBP8.16□□□□□ -1.1
TCF4-228ENST00000565393 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 DLK2Q6UY11 383 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 KRT26Q7Z3Y9 468 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 PODNQ7Z5L7 613 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 C2orf69Q8N8R5 385 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 ANKRD2Q9GZV1 360 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 SPINK5Q9NQ38 1064 aaPredicted RBP8.16□□□□□ -1.1
TCF4-228ENST00000565393 TLL2Q9Y6L7 1015 aa8.16□□□□□ -1.1
TCF4-228ENST00000565393 ANKRD18BA2A2Z9 1011 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 PLIN1O60240 522 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 AOC2O75106 756 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 CSF1RP07333 972 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 USP17L8P0C7I0 530 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 SCARF1Q14162 830 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 KIF4BQ2VIQ3 1234 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 SAPCD2Q86UD0 394 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 SULF1Q8IWU6 871 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 AGBL3Q8NEM8 1001 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 C9orf78Q9NZ63 289 aaPredicted RBP8.15□□□□□ -1.1
TCF4-228ENST00000565393 LEMD3Q9Y2U8 911 aa8.15□□□□□ -1.1
TCF4-228ENST00000565393 CACNA1SQ13698 1873 aa8.15□□□□□ -1.11
TCF4-228ENST00000565393 RTL9Q8NET4 1388 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 ADM5C9JUS6 153 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 EGFRP00533 1210 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 MAP2K2P36507 400 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 IFIT5Q13325 482 aaKnown RBP8.14□□□□□ -1.11
TCF4-228ENST00000565393 CCDC57Q2TAC2 916 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 TAF7LQ5H9L4 462 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 BEND3Q5T5X7 828 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 ANGEL2Q5VTE6 544 aaKnown RBP8.14□□□□□ -1.11
TCF4-228ENST00000565393 OGFOD1Q8N543 542 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
TCF4-228ENST00000565393 PLA2G12BQ9BX93 195 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 COA1Q9GZY4 146 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 PRDM10Q9NQV6 1147 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 ARFGEF2Q9Y6D5 1785 aa8.14□□□□□ -1.11
TCF4-228ENST00000565393 SCN4AP35499 1836 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 ZNF804BA4D1E1 1349 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 TAF5LO75529 589 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 HUNKP57058 714 aa8.13□□□□□ -1.11
TCF4-228ENST00000565393 FOXO4P98177 505 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms