RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 C20orf204Q6ZNR8 217 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 PODNQ7Z5L7 613 aa7.77□□□□□ -1.17
PALB2-203ENST00000565038 BEND7Q8N7W2 519 aaPredicted RBP7.77□□□□□ -1.17
PALB2-203ENST00000565038 SCARF2Q96GP6 870 aaPredicted RBP7.77□□□□□ -1.17
PALB2-203ENST00000565038 JPH1Q9HDC5 661 aaPredicted RBP7.77□□□□□ -1.17
PALB2-203ENST00000565038 PHF20L1A8MW92 1017 aa7.76□□□□□ -1.17
PALB2-203ENST00000565038 HYAL2Q12891 473 aa7.76□□□□□ -1.17
PALB2-203ENST00000565038 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
PALB2-203ENST00000565038 CHRDQ9H2X0 955 aa7.76□□□□□ -1.17
PALB2-203ENST00000565038 MKL2Q9ULH7 1088 aa7.76□□□□□ -1.17
PALB2-203ENST00000565038 PHACTR2O75167 634 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
PALB2-203ENST00000565038 GHRHP01286 108 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 CES1P23141 567 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 MAPK1P28482 360 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 IRS1P35568 1242 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 NCAPG2Q86XI2 1143 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 LPIN3Q9BQK8 851 aa7.75□□□□□ -1.17
PALB2-203ENST00000565038 SMG9Q9H0W8 520 aaKnown RBP7.75□□□□□ -1.17
PALB2-203ENST00000565038 EREGO14944 169 aa7.74□□□□□ -1.17
PALB2-203ENST00000565038 LILRB5O75023 590 aa7.74□□□□□ -1.17
PALB2-203ENST00000565038 HOXD8P13378 290 aaPredicted RBP7.74□□□□□ -1.17
PALB2-203ENST00000565038 FAM129BQ96TA1 746 aa7.74□□□□□ -1.17
PALB2-203ENST00000565038 SUV39H2Q9H5I1 410 aa7.74□□□□□ -1.17
PALB2-203ENST00000565038 DCTN4Q9UJW0 460 aa7.74□□□□□ -1.17
PALB2-203ENST00000565038 GPR182O15218 404 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 ATP11AP98196 1134 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 PDE3BQ13370 1112 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 COL9A3Q14050 684 aaPredicted RBP7.73□□□□□ -1.17
PALB2-203ENST00000565038 SNX29Q8TEQ0 813 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 PLD4Q96BZ4 506 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 TRIM11Q96F44 468 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 SPACA7Q96KW9 195 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 RBCK1Q9BYM8 510 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 NIF3L1Q9GZT8 377 aa7.73□□□□□ -1.17
PALB2-203ENST00000565038 GNB5O14775 395 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 POLR3DP05423 398 aaPredicted RBP7.72□□□□□ -1.17
PALB2-203ENST00000565038 ACPPP15309 386 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 AFF1P51825 1210 aaKnown RBP7.72□□□□□ -1.17
PALB2-203ENST00000565038 ORC1Q13415 861 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 TMC7Q7Z402 723 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 PLVAPQ9BX97 442 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 RBSNQ9H1K0 784 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 FRRS1LQ9P0K9 344 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 SALL4Q9UJQ4 1053 aa7.72□□□□□ -1.17
PALB2-203ENST00000565038 KIF4AO95239 1232 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 IGHA2P01877 340 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 NID1P14543 1247 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 GRIK5Q16478 980 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
PALB2-203ENST00000565038 CEP120Q8N960 986 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 GZF1Q9H116 711 aaPredicted RBP7.71□□□□□ -1.18
PALB2-203ENST00000565038 RASSF4Q9H2L5 321 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 ZFYVE28Q9HCC9 887 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
PALB2-203ENST00000565038 RNF225M0QZC1 329 aaPredicted RBP7.7□□□□□ -1.18
PALB2-203ENST00000565038 TRPA1O75762 1119 aa7.7□□□□□ -1.18
PALB2-203ENST00000565038 USPL1Q5W0Q7 1092 aa7.7□□□□□ -1.18
PALB2-203ENST00000565038 SND1Q7KZF4 910 aaKnown RBP eCLIP7.7□□□□□ -1.18
PALB2-203ENST00000565038 PMEPA1Q969W9 287 aa7.7□□□□□ -1.18
PALB2-203ENST00000565038 TRIM33Q9UPN9 1127 aa7.7□□□□□ -1.18
PALB2-203ENST00000565038 COL8A1P27658 744 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 GSK3AP49840 483 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 TRAPPC3LQ5T215 181 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 CEP135Q66GS9 1140 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 DMRTB1Q96MA1 342 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 LATS2Q9NRM7 1088 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 AMOTL2Q9Y2J4 779 aa7.69□□□□□ -1.18
PALB2-203ENST00000565038 FAM229AH3BQW9 127 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 PIK3R2O00459 728 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 RASSF7Q02833 373 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 KCNMA1Q12791 1236 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 DMRTC2Q8IXT2 367 aaPredicted RBP7.68□□□□□ -1.18
PALB2-203ENST00000565038 TTC9Q92623 222 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 HHIPQ96QV1 700 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 PBX4Q9BYU1 374 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 LACRTQ9GZZ8 138 aa7.68□□□□□ -1.18
PALB2-203ENST00000565038 EIF1AYO14602 144 aaKnown RBP7.67□□□□□ -1.18
PALB2-203ENST00000565038 SMNDC1O75940 238 aaKnown RBP eCLIP7.67□□□□□ -1.18
PALB2-203ENST00000565038 NEFLP07196 543 aa7.67□□□□□ -1.18
PALB2-203ENST00000565038 ADAMTSL4Q6UY14 1074 aa7.67□□□□□ -1.18
PALB2-203ENST00000565038 OSMRQ99650 979 aa7.67□□□□□ -1.18
PALB2-203ENST00000565038 DZANK1Q9NVP4 752 aa7.67□□□□□ -1.18
PALB2-203ENST00000565038 NOP53Q9NZM5 478 aaKnown RBP7.67□□□□□ -1.18
PALB2-203ENST00000565038 CPNE3O75131 537 aaKnown RBP7.66□□□□□ -1.18
PALB2-203ENST00000565038 EDN3P14138 238 aa7.66□□□□□ -1.18
PALB2-203ENST00000565038 PLCB3Q01970 1234 aa7.66□□□□□ -1.18
PALB2-203ENST00000565038 MSL1Q68DK7 614 aa7.66□□□□□ -1.18
PALB2-203ENST00000565038 WFDC8Q8IUA0 241 aa7.66□□□□□ -1.18
PALB2-203ENST00000565038 ZSCAN29Q8IWY8 852 aaPredicted RBP7.66□□□□□ -1.18
PALB2-203ENST00000565038 IL22RA1Q8N6P7 574 aa7.66□□□□□ -1.18
PALB2-203ENST00000565038 ALKBH8Q96BT7 664 aaKnown RBP7.66□□□□□ -1.18
PALB2-203ENST00000565038 POP1Q99575 1024 aaKnown RBP7.66□□□□□ -1.18
PALB2-203ENST00000565038 ZKSCAN3Q9BRR0 538 aa7.66□□□□□ -1.18
PALB2-203ENST00000565038 NFKBIEO00221 500 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 TREHO43280 583 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 GDF11O95390 407 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 BAG6P46379 1132 aa7.65□□□□□ -1.18
PALB2-203ENST00000565038 DSC3Q14574 896 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms