RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 SERPINA10Q9UK55 444 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 LRFN2Q9ULH4 789 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 TRIM33Q9UPN9 1127 aa6.35□□□□□ -1.39
CHD9-211ENST00000564600 OAS3Q9Y6K5 1087 aaKnown RBP6.35□□□□□ -1.39
CHD9-211ENST00000564600 MAP3K6O95382 1288 aa6.34□□□□□ -1.39
CHD9-211ENST00000564600 WISP1O95388 367 aa6.34□□□□□ -1.39
CHD9-211ENST00000564600 CD97P48960 835 aa6.34□□□□□ -1.39
CHD9-211ENST00000564600 ARSDP51689 593 aa6.34□□□□□ -1.39
CHD9-211ENST00000564600 HIF1AQ16665 826 aa6.34□□□□□ -1.39
CHD9-211ENST00000564600 CMTR1Q8N1G2 835 aaKnown RBP6.34□□□□□ -1.39
CHD9-211ENST00000564600 PBXIP1Q96AQ6 731 aa6.34□□□□□ -1.39
CHD9-211ENST00000564600 UBL7Q96S82 380 aaPredicted RBP6.34□□□□□ -1.39
CHD9-211ENST00000564600 RTCBQ9Y3I0 505 aaKnown RBP6.34□□□□□ -1.39
CHD9-211ENST00000564600 OPLAHO14841 1288 aa6.33□□□□□ -1.4
CHD9-211ENST00000564600 EPB42P16452 691 aa6.33□□□□□ -1.4
CHD9-211ENST00000564600 FAM26DQ5JW98 314 aa6.33□□□□□ -1.4
CHD9-211ENST00000564600 EFCC1Q9HA90 598 aa6.33□□□□□ -1.4
CHD9-211ENST00000564600 CARNS1A5YM72 827 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 FOXO3O43524 673 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 MMP20O60882 483 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 XYLBO75191 536 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 TAL1P17542 331 aaPredicted RBP6.32□□□□□ -1.4
CHD9-211ENST00000564600 SCNN1AP37088 669 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 SETDB1Q15047 1291 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 SWI5Q1ZZU3 235 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 ADAMTSL4Q6UY14 1074 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 GALNT11Q8NCW6 608 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 SAP130Q9H0E3 1048 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
CHD9-211ENST00000564600 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
CHD9-211ENST00000564600 COL17A1Q9UMD9 1497 aaPredicted RBP6.32□□□□□ -1.4
CHD9-211ENST00000564600 LOC102724428A0A0B4J2F2 783 aa6.31□□□□□ -1.4
CHD9-211ENST00000564600 IRAK1P51617 712 aa6.31□□□□□ -1.4
CHD9-211ENST00000564600 SIK1P57059 783 aa6.31□□□□□ -1.4
CHD9-211ENST00000564600 COX20Q5RI15 118 aa6.31□□□□□ -1.4
CHD9-211ENST00000564600 MKNK1Q9BUB5 465 aa6.31□□□□□ -1.4
CHD9-211ENST00000564600 CARD10Q9BWT7 1032 aa6.31□□□□□ -1.4
CHD9-211ENST00000564600 MRPL18Q9H0U6 180 aaKnown RBP6.31□□□□□ -1.4
CHD9-211ENST00000564600 LINC01387J3KSC0 135 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 PAX4O43316 350 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 NRLP54845 237 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
CHD9-211ENST00000564600 PCSK7Q16549 785 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 TTC9Q92623 222 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 LACRTQ9GZZ8 138 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 CXXC1Q9P0U4 656 aaPredicted RBP6.3□□□□□ -1.4
CHD9-211ENST00000564600 RAXQ9Y2V3 346 aa6.3□□□□□ -1.4
CHD9-211ENST00000564600 DDX3YO15523 660 aaKnown RBP6.29□□□□□ -1.4
CHD9-211ENST00000564600 COBLO75128 1261 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 GHRHP01286 108 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 IGLV1-40P01703 118 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 ATP11AP98196 1134 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
CHD9-211ENST00000564600 COL13A1Q5TAT6 717 aaPredicted RBP6.29□□□□□ -1.4
CHD9-211ENST00000564600 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 ARMC10Q8N2F6 343 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 MYO19Q96H55 970 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 STOML1Q9UBI4 398 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 KCNMB2Q9Y691 235 aa6.29□□□□□ -1.4
CHD9-211ENST00000564600 HMX2A2RU54 273 aa6.28□□□□□ -1.4
CHD9-211ENST00000564600 SUPT5HO00267 1087 aaKnown RBP6.28□□□□□ -1.4
CHD9-211ENST00000564600 PSAPP07602 524 aa6.28□□□□□ -1.4
CHD9-211ENST00000564600 C11orf91Q3C1V1 193 aa6.28□□□□□ -1.4
CHD9-211ENST00000564600 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
CHD9-211ENST00000564600 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.28□□□□□ -1.4
CHD9-211ENST00000564600 CLP1Q92989 425 aaKnown RBP6.28□□□□□ -1.4
CHD9-211ENST00000564600 TIMELESSQ9UNS1 1208 aa6.28□□□□□ -1.4
CHD9-211ENST00000564600 TMEM88BA6NKF7 163 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 TNFRSF10BO14763 440 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 PTCD1O75127 700 aaKnown RBP6.27□□□□□ -1.41
CHD9-211ENST00000564600 TRIP4Q15650 581 aaPredicted RBP6.27□□□□□ -1.41
CHD9-211ENST00000564600 Q6ZS46 218 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 ZDHHC13Q8IUH4 622 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 ETFBKMTQ8IXQ9 262 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 TMEM130Q8N3G9 435 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 COL26A1Q96A83 441 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 VTI1AQ96AJ9 217 aa6.27□□□□□ -1.41
CHD9-211ENST00000564600 C7orf69Q9H7B7 122 aa6.26□□□□□ -1.41
CHD9-211ENST00000564600 SEPT3Q9UH03 358 aa6.26□□□□□ -1.41
CHD9-211ENST00000564600 RNF114Q9Y508 228 aa6.26□□□□□ -1.41
CHD9-211ENST00000564600 UBASH3BQ8TF42 649 aa6.25□□□□□ -1.41
CHD9-211ENST00000564600 FMNL2Q96PY5 1086 aa6.25□□□□□ -1.41
CHD9-211ENST00000564600 KIAA1324LA8MWY0 1029 aaPredicted RBP6.24□□□□□ -1.41
CHD9-211ENST00000564600 ZBTB39O15060 712 aa6.24□□□□□ -1.41
CHD9-211ENST00000564600 ATP2B4P23634 1241 aa6.24□□□□□ -1.41
CHD9-211ENST00000564600 CEP135Q66GS9 1140 aa6.24□□□□□ -1.41
CHD9-211ENST00000564600 C16orf46Q6P387 395 aa6.24□□□□□ -1.41
CHD9-211ENST00000564600 UTP4Q969X6 686 aaKnown RBP6.24□□□□□ -1.41
CHD9-211ENST00000564600 SH2B1Q9NRF2 756 aaPredicted RBP6.24□□□□□ -1.41
CHD9-211ENST00000564600 PPME1Q9Y570 386 aa6.24□□□□□ -1.41
CHD9-211ENST00000564600 EGFRP00533 1210 aa6.23□□□□□ -1.41
CHD9-211ENST00000564600 CYP2E1P05181 493 aaPredicted RBP6.23□□□□□ -1.41
CHD9-211ENST00000564600 TXKP42681 527 aa6.23□□□□□ -1.41
CHD9-211ENST00000564600 NFIAQ12857 509 aa6.23□□□□□ -1.41
CHD9-211ENST00000564600 PHLDB3Q6NSJ2 640 aa6.23□□□□□ -1.41
CHD9-211ENST00000564600 ARID3AQ99856 593 aa6.23□□□□□ -1.41
CHD9-211ENST00000564600 RASSF4Q9H2L5 321 aa6.23□□□□□ -1.41
CHD9-211ENST00000564600 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.23□□□□□ -1.41
CHD9-211ENST00000564600 PRR19A6NJB7 356 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms