RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 PMEPA1Q969W9 287 aa7.76□□□□□ -1.17
LINC00560-201ENST00000564593 TRERF1Q96PN7 1200 aa7.76□□□□□ -1.17
LINC00560-201ENST00000564593 CFHR5Q9BXR6 569 aa7.76□□□□□ -1.17
LINC00560-201ENST00000564593 MRS2Q9HD23 443 aa7.76□□□□□ -1.17
LINC00560-201ENST00000564593 MBIPQ9NS73 344 aa7.76□□□□□ -1.17
LINC00560-201ENST00000564593 HCN2Q9UL51 889 aa7.76□□□□□ -1.17
LINC00560-201ENST00000564593 RARAP10276 462 aa7.75□□□□□ -1.17
LINC00560-201ENST00000564593 FGFR3P22607 806 aa7.75□□□□□ -1.17
LINC00560-201ENST00000564593 DAB2P98082 770 aa7.75□□□□□ -1.17
LINC00560-201ENST00000564593 TMC4Q7Z404 712 aa7.75□□□□□ -1.17
LINC00560-201ENST00000564593 CCDC74AQ96AQ1 378 aa7.75□□□□□ -1.17
LINC00560-201ENST00000564593 CHRDQ9H2X0 955 aa7.75□□□□□ -1.17
LINC00560-201ENST00000564593 GPR25O00155 361 aa7.74□□□□□ -1.17
LINC00560-201ENST00000564593 POLR3DP05423 398 aaPredicted RBP7.74□□□□□ -1.17
LINC00560-201ENST00000564593 BCRP11274 1271 aa7.74□□□□□ -1.17
LINC00560-201ENST00000564593 NFKB1P19838 968 aa7.74□□□□□ -1.17
LINC00560-201ENST00000564593 CES1P23141 567 aa7.74□□□□□ -1.17
LINC00560-201ENST00000564593 ITGAEP38570 1179 aa7.74□□□□□ -1.17
LINC00560-201ENST00000564593 SLC30A3Q99726 388 aa7.74□□□□□ -1.17
LINC00560-201ENST00000564593 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.74□□□□□ -1.17
LINC00560-201ENST00000564593 IGF1RP08069 1367 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 EREGO14944 169 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 SORBS3O60504 671 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 MMP20O60882 483 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 GNA15P30679 374 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 MRPL58Q14197 206 aaKnown RBP7.73□□□□□ -1.17
LINC00560-201ENST00000564593 RAB44Q7Z6P3 723 aaPredicted RBP7.73□□□□□ -1.17
LINC00560-201ENST00000564593 NEDD1Q8NHV4 660 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 BHMTQ93088 406 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 EFCC1Q9HA90 598 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 NLRP2Q9NX02 1062 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 ZFATQ9P243 1243 aa7.73□□□□□ -1.17
LINC00560-201ENST00000564593 NEUROD1Q13562 356 aa7.72□□□□□ -1.17
LINC00560-201ENST00000564593 TSNAXIP1Q2TAA8 658 aa7.72□□□□□ -1.17
LINC00560-201ENST00000564593 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
LINC00560-201ENST00000564593 Q8N3U1 123 aa7.72□□□□□ -1.17
LINC00560-201ENST00000564593 EPS8L3Q8TE67 593 aaKnown RBP7.72□□□□□ -1.17
LINC00560-201ENST00000564593 SPG7Q9UQ90 795 aa7.72□□□□□ -1.17
LINC00560-201ENST00000564593 CYP2E1P05181 493 aaPredicted RBP7.71□□□□□ -1.17
LINC00560-201ENST00000564593 CTBSQ01459 385 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 FAM182BQ5T319 152 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 PI16Q6UXB8 463 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 GALNT12Q8IXK2 581 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 OR13H1Q8NG92 308 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 FRMD6Q96NE9 622 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 NPHS2Q9NP85 383 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 LRRC4BQ9NT99 713 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 KANSL3Q9P2N6 904 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 VTI1BQ9UEU0 232 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 PRR12Q9ULL5 1215 aa7.71□□□□□ -1.17
LINC00560-201ENST00000564593 PSAPP07602 524 aa7.71□□□□□ -1.18
LINC00560-201ENST00000564593 PSMG3-AS1Q96PY0 264 aa7.71□□□□□ -1.18
LINC00560-201ENST00000564593 BACH2Q9BYV9 841 aa7.71□□□□□ -1.18
LINC00560-201ENST00000564593 TLR7Q9NYK1 1049 aaKnown RBP7.71□□□□□ -1.18
LINC00560-201ENST00000564593 AK5Q9Y6K8 562 aa7.71□□□□□ -1.18
LINC00560-201ENST00000564593 GADD45BO75293 160 aaPredicted RBP7.7□□□□□ -1.18
LINC00560-201ENST00000564593 MAP3K6O95382 1288 aa7.7□□□□□ -1.18
LINC00560-201ENST00000564593 RECKO95980 971 aa7.7□□□□□ -1.18
LINC00560-201ENST00000564593 BAG6P46379 1132 aa7.7□□□□□ -1.18
LINC00560-201ENST00000564593 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
LINC00560-201ENST00000564593 ACDQ96AP0 544 aa7.69□□□□□ -1.18
LINC00560-201ENST00000564593 IGSF5Q9NSI5 407 aa7.69□□□□□ -1.18
LINC00560-201ENST00000564593 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.69□□□□□ -1.18
LINC00560-201ENST00000564593 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.68□□□□□ -1.18
LINC00560-201ENST00000564593 GIPC1O14908 333 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 EDN3P14138 238 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 TCF3P15923 654 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 EIF4BP23588 611 aaKnown RBP7.68□□□□□ -1.18
LINC00560-201ENST00000564593 SOX18P35713 384 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 PLAURQ03405 335 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 KRTAP9-2Q9BYQ4 174 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 SALL4Q9UJQ4 1053 aa7.68□□□□□ -1.18
LINC00560-201ENST00000564593 BMP4P12644 408 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 HYAL2Q12891 473 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 NCAPG2Q86XI2 1143 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 TMEM87AQ8NBN3 555 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 OSBPL7Q9BZF2 842 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 IGFLR1Q9H665 355 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 LATS2Q9NRM7 1088 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 MX2P20592 715 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 SYT9Q86SS6 491 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 BCO2Q9BYV7 579 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 C12orf49Q9H741 205 aa7.67□□□□□ -1.18
LINC00560-201ENST00000564593 C2CD2LO14523 706 aa7.66□□□□□ -1.18
LINC00560-201ENST00000564593 COL13A1Q5TAT6 717 aaPredicted RBP7.66□□□□□ -1.18
LINC00560-201ENST00000564593 ZNF468Q5VIY5 522 aaPredicted RBP7.66□□□□□ -1.18
LINC00560-201ENST00000564593 KIAA0319Q5VV43 1072 aa7.66□□□□□ -1.18
LINC00560-201ENST00000564593 NXPE4Q6UWF7 544 aa7.66□□□□□ -1.18
LINC00560-201ENST00000564593 NSUN5Q96P11 429 aaKnown RBP7.66□□□□□ -1.18
LINC00560-201ENST00000564593 A0A1W2PP55 124 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 KRBA1A5PL33 1030 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 SCAMP3O14828 347 aaKnown RBP7.65□□□□□ -1.18
LINC00560-201ENST00000564593 KIF4AO95239 1232 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 NRLP54845 237 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 TBC1D8BQ0IIM8 1120 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 LDLRAD1Q5T700 205 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 PEAR1Q5VY43 1037 aaPredicted RBP7.65□□□□□ -1.18
LINC00560-201ENST00000564593 ALYREFQ86V81 257 aaKnown RBP7.65□□□□□ -1.18
LINC00560-201ENST00000564593 SPACA7Q96KW9 195 aa7.65□□□□□ -1.18
LINC00560-201ENST00000564593 UBE2OQ9C0C9 1292 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms