RNA–Protein interactions for RNA: ENST00000564572.1

CNN2-206, Transcript of calponin 2, humanhuman

Gene CNN2, Length 2,266 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-206ENST00000564572 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.39
CNN2-206ENST00000564572 CNNM1Q9NRU3 951 aa17.46■□□□□ 0.39
CNN2-206ENST00000564572 FRAT2O75474 233 aaPredicted RBP17.45■□□□□ 0.38
CNN2-206ENST00000564572 ATP2B3Q16720 1220 aa17.45■□□□□ 0.38
CNN2-206ENST00000564572 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
CNN2-206ENST00000564572 MAP4K1Q92918 833 aa17.45■□□□□ 0.38
CNN2-206ENST00000564572 NARFQ9UHQ1 456 aa17.45■□□□□ 0.38
CNN2-206ENST00000564572 ADORA1P30542 326 aa17.45■□□□□ 0.38
CNN2-206ENST00000564572 CCDC158Q5M9N0 1113 aa17.45■□□□□ 0.38
CNN2-206ENST00000564572 RASEFQ8IZ41 740 aa17.45■□□□□ 0.38
CNN2-206ENST00000564572 QTRT2Q9H974 415 aaKnown RBP17.45■□□□□ 0.38
CNN2-206ENST00000564572 AKAP11Q9UKA4 1901 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 NECTIN1Q15223 517 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 CCDC152Q4G0S7 254 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
CNN2-206ENST00000564572 MROH5Q6ZUA9 1318 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 MYH7P12883 1935 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 A0A1B0GUL6 1792 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 GOLIM4O00461 696 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 BCL2L12Q9HB09 334 aa17.44■□□□□ 0.38
CNN2-206ENST00000564572 RBM8AQ9Y5S9 174 aaKnown RBP17.44■□□□□ 0.38
CNN2-206ENST00000564572 GNPATO15228 680 aa17.43■□□□□ 0.38
CNN2-206ENST00000564572 PDE8BO95263 885 aa17.43■□□□□ 0.38
CNN2-206ENST00000564572 TTC39AQ5SRH9 613 aa17.43■□□□□ 0.38
CNN2-206ENST00000564572 ZNF589Q86UQ0 364 aaPredicted RBP17.43■□□□□ 0.38
CNN2-206ENST00000564572 GORABQ5T7V8 394 aa17.42■□□□□ 0.38
CNN2-206ENST00000564572 PRPF40BQ6NWY9 871 aaKnown RBP17.42■□□□□ 0.38
CNN2-206ENST00000564572 ZNF512BQ96KM6 892 aaPredicted RBP17.42■□□□□ 0.38
CNN2-206ENST00000564572 UPF3BQ9BZI7 483 aaKnown RBP17.42■□□□□ 0.38
CNN2-206ENST00000564572 TAF5LO75529 589 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 TM6SF1Q9BZW5 370 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 RTCBQ9Y3I0 505 aaKnown RBP17.41■□□□□ 0.38
CNN2-206ENST00000564572 RAB3GAP1Q15042 981 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 USPL1Q5W0Q7 1092 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 CREB3L3Q68CJ9 461 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 TMX3Q96JJ7 454 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 TTC14Q96N46 770 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 HELLSQ9NRZ9 838 aa17.41■□□□□ 0.38
CNN2-206ENST00000564572 FGFR2P21802 821 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
CNN2-206ENST00000564572 TBC1D9BQ66K14 1250 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 CWC22Q9HCG8 908 aaKnown RBP17.4■□□□□ 0.38
CNN2-206ENST00000564572 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 UBR3Q6ZT12 1888 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 RPAP1Q9BWH6 1393 aaPredicted RBP17.4■□□□□ 0.38
CNN2-206ENST00000564572 COL4A1P02462 1669 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 ZKSCAN1P17029 563 aaPredicted RBP17.4■□□□□ 0.38
CNN2-206ENST00000564572 CUL4AQ13619 759 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 ZMYM1Q5SVZ6 1142 aa17.4■□□□□ 0.38
CNN2-206ENST00000564572 KCNJ4P48050 445 aa17.39■□□□□ 0.37
CNN2-206ENST00000564572 ERFEQ4G0M1 354 aa17.39■□□□□ 0.37
CNN2-206ENST00000564572 LPIN2Q92539 896 aa17.39■□□□□ 0.37
CNN2-206ENST00000564572 MPHOSPH8Q99549 860 aa17.39■□□□□ 0.37
CNN2-206ENST00000564572 HMG20BQ9P0W2 317 aa17.39■□□□□ 0.37
CNN2-206ENST00000564572 SLC27A2O14975 620 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 ZPR1O75312 459 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 IGHMBP2P38935 993 aaKnown RBP17.38■□□□□ 0.37
CNN2-206ENST00000564572 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
CNN2-206ENST00000564572 LRRFIP1Q32MZ4 808 aaKnown RBP17.38■□□□□ 0.37
CNN2-206ENST00000564572 SLC10A5Q5PT55 438 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 FAM196AQ6ZSG2 479 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 NYXQ9GZU5 481 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
CNN2-206ENST00000564572 RNF113AO15541 343 aaKnown RBP17.38■□□□□ 0.37
CNN2-206ENST00000564572 CHGBP05060 677 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 SSFA2P28290 1259 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 SCARF1Q14162 830 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 SMIM5Q71RC9 77 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 SEC62Q99442 399 aaKnown RBP17.38■□□□□ 0.37
CNN2-206ENST00000564572 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
CNN2-206ENST00000564572 CASTP20810 708 aaKnown RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 FKBP4Q02790 459 aaKnown RBP eCLIP17.37■□□□□ 0.37
CNN2-206ENST00000564572 TSGA10IPQ3SY00 556 aa17.37■□□□□ 0.37
CNN2-206ENST00000564572 CDC5LQ99459 802 aaKnown RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 ZFYP08048 801 aaPredicted RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 ARID4AP29374 1257 aaPredicted RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
CNN2-206ENST00000564572 KRT27Q7Z3Y8 459 aa17.37■□□□□ 0.37
CNN2-206ENST00000564572 ARHGEF1Q92888 912 aaKnown RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 INTS4Q96HW7 963 aaKnown RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 JAKMIP1Q96N16 626 aaKnown RBP17.37■□□□□ 0.37
CNN2-206ENST00000564572 DOCK2Q92608 1830 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 MCAMP43121 646 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 U3KPZ7 1027 aaPredicted RBP17.36■□□□□ 0.37
CNN2-206ENST00000564572 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 SLC5A1P13866 664 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 MCM4P33991 863 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 ZAP70P43403 619 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 VPS53Q5VIR6 699 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 BICDL1Q6ZP65 573 aa17.36■□□□□ 0.37
CNN2-206ENST00000564572 ZGPATQ8N5A5 531 aaKnown RBP17.36■□□□□ 0.37
CNN2-206ENST00000564572 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
CNN2-206ENST00000564572 LRRC4BQ9NT99 713 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms