RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TRMT112Q9UI30 125 aaKnown RBP21■□□□□ 0.95
RNF40-205ENST00000563909 NUDCQ9Y266 331 aa21■□□□□ 0.95
RNF40-205ENST00000563909 TAF1P21675 1872 aa21■□□□□ 0.95
RNF40-205ENST00000563909 GPSM2P81274 684 aa20.99■□□□□ 0.95
RNF40-205ENST00000563909 SREBF2Q12772 1141 aa20.99■□□□□ 0.95
RNF40-205ENST00000563909 TTLL12Q14166 644 aaPredicted RBP20.99■□□□□ 0.95
RNF40-205ENST00000563909 NLRP10Q86W26 655 aa20.99■□□□□ 0.95
RNF40-205ENST00000563909 EYA3Q99504 573 aa20.99■□□□□ 0.95
RNF40-205ENST00000563909 SCAF8Q9UPN6 1271 aaKnown RBP20.99■□□□□ 0.95
RNF40-205ENST00000563909 TRIM17Q9Y577 477 aa20.99■□□□□ 0.95
RNF40-205ENST00000563909 BRCA2P51587 3418 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 A0A0C4DFX4 3053 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 DLL1O00548 723 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 ZNF280AP59817 542 aaPredicted RBP20.98■□□□□ 0.95
RNF40-205ENST00000563909 PRAMEF18Q5VWM3 479 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 CFHR5Q9BXR6 569 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 SH3TC1Q8TE82 1336 aa20.98■□□□□ 0.95
RNF40-205ENST00000563909 LRRC37AA6NMS7 1700 aa20.97■□□□□ 0.95
RNF40-205ENST00000563909 EN2P19622 333 aaPredicted RBP20.96■□□□□ 0.95
RNF40-205ENST00000563909 OTOP1Q7RTM1 612 aa20.96■□□□□ 0.95
RNF40-205ENST00000563909 LRP10Q7Z4F1 713 aa20.96■□□□□ 0.95
RNF40-205ENST00000563909 TBC1D16Q8TBP0 767 aa20.96■□□□□ 0.95
RNF40-205ENST00000563909 CELF1Q92879 486 aaKnown RBP20.96■□□□□ 0.95
RNF40-205ENST00000563909 ZNF428Q96B54 188 aa20.96■□□□□ 0.95
RNF40-205ENST00000563909 ZC3H12CQ9C0D7 883 aaKnown RBP20.96■□□□□ 0.95
RNF40-205ENST00000563909 G3V3G9 751 aa20.95■□□□□ 0.94
RNF40-205ENST00000563909 HSP90AB3PQ58FF7 597 aa20.95■□□□□ 0.94
RNF40-205ENST00000563909 DCAF8Q5TAQ9 597 aa20.95■□□□□ 0.94
RNF40-205ENST00000563909 PITPNM2Q9BZ72 1349 aa20.95■□□□□ 0.94
RNF40-205ENST00000563909 PDIA6Q15084 440 aa20.94■□□□□ 0.94
RNF40-205ENST00000563909 AGBL3Q8NEM8 1001 aa20.94■□□□□ 0.94
RNF40-205ENST00000563909 MYOZ2Q9NPC6 264 aa20.94■□□□□ 0.94
RNF40-205ENST00000563909 KDM3BQ7LBC6 1761 aa20.94■□□□□ 0.94
RNF40-205ENST00000563909 ANXA1P04083 346 aa20.93■□□□□ 0.94
RNF40-205ENST00000563909 USP17L8P0C7I0 530 aa20.93■□□□□ 0.94
RNF40-205ENST00000563909 PROSER3Q2NL68 480 aa20.93■□□□□ 0.94
RNF40-205ENST00000563909 RSBN1LQ6PCB5 846 aaPredicted RBP20.93■□□□□ 0.94
RNF40-205ENST00000563909 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
RNF40-205ENST00000563909 ALDH1A1P00352 501 aa20.92■□□□□ 0.94
RNF40-205ENST00000563909 EIF2S2P20042 333 aaKnown RBP20.92■□□□□ 0.94
RNF40-205ENST00000563909 TCIRG1Q13488 830 aa20.92■□□□□ 0.94
RNF40-205ENST00000563909 DDX60Q8IY21 1712 aaKnown RBP20.92■□□□□ 0.94
RNF40-205ENST00000563909 SCN9AQ15858 1988 aa20.92■□□□□ 0.94
RNF40-205ENST00000563909 TRIOBPQ9H2D6 2365 aa20.92■□□□□ 0.94
RNF40-205ENST00000563909 AIMP1Q12904 312 aaKnown RBP20.91■□□□□ 0.94
RNF40-205ENST00000563909 KIAA0100Q14667 2235 aaKnown RBP20.91■□□□□ 0.94
RNF40-205ENST00000563909 PTPN22Q9Y2R2 807 aa20.91■□□□□ 0.94
RNF40-205ENST00000563909 CEP290O15078 2479 aa20.9■□□□□ 0.94
RNF40-205ENST00000563909 NF2P35240 595 aa20.9■□□□□ 0.94
RNF40-205ENST00000563909 PTPN12Q05209 780 aaKnown RBP20.9■□□□□ 0.94
RNF40-205ENST00000563909 COPS6Q7L5N1 327 aa20.9■□□□□ 0.94
RNF40-205ENST00000563909 SLC17A8Q8NDX2 589 aa20.9■□□□□ 0.94
RNF40-205ENST00000563909 SF3B3Q15393 1217 aaKnown RBP20.89■□□□□ 0.93
RNF40-205ENST00000563909 NBPF9Q3BBW0 867 aa20.89■□□□□ 0.93
RNF40-205ENST00000563909 NECTIN2Q92692 538 aa20.89■□□□□ 0.93
RNF40-205ENST00000563909 ARMC5Q96C12 935 aa20.89■□□□□ 0.93
RNF40-205ENST00000563909 GMLQ99445 158 aa20.89■□□□□ 0.93
RNF40-205ENST00000563909 RBBP6Q7Z6E9 1792 aaKnown RBP20.89■□□□□ 0.93
RNF40-205ENST00000563909 H0YGN5 161 aa20.88■□□□□ 0.93
RNF40-205ENST00000563909 PRKG1Q13976 671 aa20.88■□□□□ 0.93
RNF40-205ENST00000563909 SPRYD7Q5W111 196 aa20.88■□□□□ 0.93
RNF40-205ENST00000563909 XAGE3Q8WTP9 111 aa20.88■□□□□ 0.93
RNF40-205ENST00000563909 TMEM106CQ9BVX2 250 aa20.88■□□□□ 0.93
RNF40-205ENST00000563909 ZNF609O15014 1411 aa20.87■□□□□ 0.93
RNF40-205ENST00000563909 UFL1O94874 794 aa20.87■□□□□ 0.93
RNF40-205ENST00000563909 RPS8P62241 208 aaKnown RBP20.87■□□□□ 0.93
RNF40-205ENST00000563909 ANKIB1Q9P2G1 1089 aa20.87■□□□□ 0.93
RNF40-205ENST00000563909 RANBP2P49792 3224 aaKnown RBP20.87■□□□□ 0.93
RNF40-205ENST00000563909 ARMC9Q7Z3E5 817 aa20.86■□□□□ 0.93
RNF40-205ENST00000563909 IFNL1Q8IU54 200 aa20.86■□□□□ 0.93
RNF40-205ENST00000563909 FAM89AQ96GI7 184 aa20.86■□□□□ 0.93
RNF40-205ENST00000563909 ERO1AQ96HE7 468 aa20.86■□□□□ 0.93
RNF40-205ENST00000563909 PODXL2Q9NZ53 605 aa20.86■□□□□ 0.93
RNF40-205ENST00000563909 COL4A1P02462 1669 aa20.86■□□□□ 0.93
RNF40-205ENST00000563909 INHBEP58166 350 aa20.85■□□□□ 0.93
RNF40-205ENST00000563909 CD99L2Q8TCZ2 262 aa20.85■□□□□ 0.93
RNF40-205ENST00000563909 OTUD5Q96G74 571 aa20.85■□□□□ 0.93
RNF40-205ENST00000563909 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
RNF40-205ENST00000563909 MANSC4A6NHS7 340 aaPredicted RBP20.84■□□□□ 0.93
RNF40-205ENST00000563909 NEFMP07197 916 aa20.84■□□□□ 0.93
RNF40-205ENST00000563909 EFCC1Q9HA90 598 aa20.84■□□□□ 0.93
RNF40-205ENST00000563909 GGA1Q9UJY5 639 aa20.84■□□□□ 0.93
RNF40-205ENST00000563909 USP17L3A6NCW0 530 aa20.83■□□□□ 0.93
RNF40-205ENST00000563909 USP17L4A6NCW7 530 aa20.83■□□□□ 0.93
RNF40-205ENST00000563909 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.93
RNF40-205ENST00000563909 LDLRAD1Q5T700 205 aa20.83■□□□□ 0.93
RNF40-205ENST00000563909 USP17L1Q7RTZ2 530 aa20.83■□□□□ 0.93
RNF40-205ENST00000563909 TSPYL4Q9UJ04 414 aa20.83■□□□□ 0.93
RNF40-205ENST00000563909 COL6A3P12111 3177 aa20.83■□□□□ 0.92
RNF40-205ENST00000563909 CHRDL2Q6WN34 429 aa20.82■□□□□ 0.92
RNF40-205ENST00000563909 SLC10A4Q96EP9 437 aa20.82■□□□□ 0.92
RNF40-205ENST00000563909 ANGEL1Q9UNK9 670 aaKnown RBP20.82■□□□□ 0.92
RNF40-205ENST00000563909 CUL9Q8IWT3 2517 aa20.82■□□□□ 0.92
RNF40-205ENST00000563909 IGF2BP3O00425 579 aaKnown RBP eCLIP20.81■□□□□ 0.92
RNF40-205ENST00000563909 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
RNF40-205ENST00000563909 ZNF333Q96JL9 665 aa20.81■□□□□ 0.92
RNF40-205ENST00000563909 WNT10BO00744 389 aa20.8■□□□□ 0.92
RNF40-205ENST00000563909 PPP2R1AP30153 589 aa20.8■□□□□ 0.92
RNF40-205ENST00000563909 OGFOD1Q8N543 542 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms