RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 RPS12P25398 132 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-206ENST00000563343 TM4SF4P48230 202 aa10.33□□□□□ -0.76
HERPUD1-206ENST00000563343 KIF4BQ2VIQ3 1234 aa10.33□□□□□ -0.76
HERPUD1-206ENST00000563343 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
HERPUD1-206ENST00000563343 EIF4A1P60842 406 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-206ENST00000563343 FKBP1BP68106 108 aa10.32□□□□□ -0.76
HERPUD1-206ENST00000563343 MOB2Q70IA6 237 aa10.32□□□□□ -0.76
HERPUD1-206ENST00000563343 SULF1Q8IWU6 871 aa10.32□□□□□ -0.76
HERPUD1-206ENST00000563343 UTP14AQ9BVJ6 771 aaKnown RBP10.32□□□□□ -0.76
HERPUD1-206ENST00000563343 R3HDMLQ9H3Y0 253 aa10.32□□□□□ -0.76
HERPUD1-206ENST00000563343 ECE2O60344 883 aa10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 VIL1P09327 827 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 HCLS1P14317 486 aaPredicted RBP10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 PDIA6Q15084 440 aa10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 WASHC4Q2M389 1173 aa10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 RTF1Q92541 710 aaKnown RBP10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 CEP290O15078 2479 aa10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 TRIOBPQ9H2D6 2365 aa10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
HERPUD1-206ENST00000563343 ZNF280AP59817 542 aaPredicted RBP10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 ANGEL2Q5VTE6 544 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 DDX46Q7L014 1031 aaKnown RBP10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 POLLQ9UGP5 575 aa10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 ECM29Q5VYK3 1845 aa10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 PITPNM2Q9BZ72 1349 aa10.3□□□□□ -0.76
HERPUD1-206ENST00000563343 UBE2Q2LH0YL09 131 aa10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 RIMBP2O15034 1052 aa10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 FKTNO75072 461 aa10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 DOK7Q18PE1 504 aa10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 NLRP10Q86W26 655 aa10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 THUMPD2Q9BTF0 503 aaKnown RBP10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 COLQQ9Y215 455 aaPredicted RBP10.29□□□□□ -0.76
HERPUD1-206ENST00000563343 GPSM2P81274 684 aa10.28□□□□□ -0.76
HERPUD1-206ENST00000563343 SCARF1Q14162 830 aa10.28□□□□□ -0.76
HERPUD1-206ENST00000563343 INTS3Q68E01 1043 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-206ENST00000563343 CELF1Q92879 486 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-206ENST00000563343 NSFL1CQ9UNZ2 370 aaKnown RBP10.28□□□□□ -0.76
HERPUD1-206ENST00000563343 COL6A3P12111 3177 aa10.28□□□□□ -0.76
HERPUD1-206ENST00000563343 EN2P19622 333 aaPredicted RBP10.27□□□□□ -0.77
HERPUD1-206ENST00000563343 PROSER3Q2NL68 480 aa10.27□□□□□ -0.77
HERPUD1-206ENST00000563343 OTOP1Q7RTM1 612 aa10.27□□□□□ -0.77
HERPUD1-206ENST00000563343 GMLQ99445 158 aa10.27□□□□□ -0.77
HERPUD1-206ENST00000563343 SCAF8Q9UPN6 1271 aaKnown RBP10.27□□□□□ -0.77
HERPUD1-206ENST00000563343 SPEF2Q9C093 1822 aa10.27□□□□□ -0.77
HERPUD1-206ENST00000563343 RANBP2P49792 3224 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 C6orf229H3BNL8 230 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 CAP1Q01518 475 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 PRAMEF18Q5VWM3 479 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 TBC1D16Q8TBP0 767 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 PNISRQ8TF01 805 aaKnown RBP10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 ARMC5Q96C12 935 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 OTUD5Q96G74 571 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 OTOFQ9HC10 1997 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 SH3TC1Q8TE82 1336 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 ZSWIM8A7E2V4 1837 aa10.26□□□□□ -0.77
HERPUD1-206ENST00000563343 ANXA1P04083 346 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 SREBF2Q12772 1141 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 SF3B3Q15393 1217 aaKnown RBP10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 RSBN1LQ6PCB5 846 aaPredicted RBP10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 AGBL3Q8NEM8 1001 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 EYA3Q99504 573 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 MYOZ2Q9NPC6 264 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 TRIM17Q9Y577 477 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 CLSPNQ9HAW4 1339 aa10.25□□□□□ -0.77
HERPUD1-206ENST00000563343 DLL1O00548 723 aa10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 PTPN12Q05209 780 aaKnown RBP10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 TCIRG1Q13488 830 aa10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 PODXL2Q9NZ53 605 aa10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 TRMT112Q9UI30 125 aaKnown RBP10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 NUDCQ9Y266 331 aa10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 PTPN22Q9Y2R2 807 aa10.24□□□□□ -0.77
HERPUD1-206ENST00000563343 NBPF9Q3BBW0 867 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 LDLRAD1Q5T700 205 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 SPRYD7Q5W111 196 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 COPS6Q7L5N1 327 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 CFAP53Q96M91 514 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 ZC3H12CQ9C0D7 883 aaKnown RBP10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 A0A0C4DFX4 3053 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 MYH3P11055 1940 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 CUL9Q8IWT3 2517 aa10.23□□□□□ -0.77
HERPUD1-206ENST00000563343 SSC5DA1L4H1 1573 aa10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 IGF2BP3O00425 579 aaKnown RBP eCLIP10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 ALDH1A1P00352 501 aa10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 USP17L8P0C7I0 530 aa10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 CNGB1Q14028 1251 aaPredicted RBP10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
HERPUD1-206ENST00000563343 H0YGN5 161 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 WNT10BO00744 389 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 EIF2S2P20042 333 aaKnown RBP10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 RPS8P62241 208 aaKnown RBP10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 CD99L2Q8TCZ2 262 aa10.21□□□□□ -0.77
HERPUD1-206ENST00000563343 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms