RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 SF3B3Q15393 1217 aaKnown RBP7.87□□□□□ -1.15
CNOT1-204ENST00000563130 SMC4Q9NTJ3 1288 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 CDHR2Q9BYE9 1310 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 DDX60Q8IY21 1712 aaKnown RBP7.87□□□□□ -1.15
CNOT1-204ENST00000563130 IRS4O14654 1257 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-204ENST00000563130 ALDH1B1P30837 517 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 CASP7P55210 303 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 PRPF40BQ6NWY9 871 aaKnown RBP7.87□□□□□ -1.15
CNOT1-204ENST00000563130 CRAMP1Q96RY5 1269 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 SLX4Q8IY92 1834 aa7.87□□□□□ -1.15
CNOT1-204ENST00000563130 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-204ENST00000563130 TMC2Q8TDI7 906 aa7.86□□□□□ -1.15
CNOT1-204ENST00000563130 SNED1Q8TER0 1413 aa7.86□□□□□ -1.15
CNOT1-204ENST00000563130 LAMB2P55268 1798 aa7.86□□□□□ -1.15
CNOT1-204ENST00000563130 ALDH1L1O75891 902 aa7.86□□□□□ -1.15
CNOT1-204ENST00000563130 RPGRQ92834 1020 aaKnown RBP7.86□□□□□ -1.15
CNOT1-204ENST00000563130 ABCC4O15439 1325 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 C21orf2O43822 256 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 PDE8AO60658 829 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 HSP90B1P14625 803 aaKnown RBP7.85□□□□□ -1.15
CNOT1-204ENST00000563130 ARHGAP45Q92619 1136 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 JARID2Q92833 1246 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-204ENST00000563130 RBM17Q96I25 401 aaKnown RBP7.85□□□□□ -1.15
CNOT1-204ENST00000563130 PLA2G12BQ9BX93 195 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 SRCIN1Q9C0H9 1055 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 NOB1Q9ULX3 412 aaKnown RBP7.85□□□□□ -1.15
CNOT1-204ENST00000563130 CHD4Q14839 1912 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 KIF16BQ96L93 1317 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 NFKBIEO00221 500 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 BCAR3O75815 825 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 ARHGAP27Q6ZUM4 889 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 UBE3BQ7Z3V4 1068 aa7.85□□□□□ -1.15
CNOT1-204ENST00000563130 UTYO14607 1347 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 LTBP3Q9NS15 1303 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 BBOX1O75936 387 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 SOGA3Q5TF21 947 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 SLC4A10Q6U841 1118 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 TMEM92Q6UXU6 159 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 TTLL11Q8NHH1 800 aa7.84□□□□□ -1.15
CNOT1-204ENST00000563130 FER1L6Q2WGJ9 1857 aa7.84□□□□□ -1.16
CNOT1-204ENST00000563130 GRM8O00222 908 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 PDE4AP27815 886 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 PRELPP51888 382 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 GRAPQ13588 217 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 CC2D2BQ6DHV5 1058 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 OLFM4Q6UX06 510 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 DDX46Q7L014 1031 aaKnown RBP7.83□□□□□ -1.16
CNOT1-204ENST00000563130 GRAPLQ8TC17 118 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-204ENST00000563130 API5Q9BZZ5 524 aaKnown RBP7.83□□□□□ -1.16
CNOT1-204ENST00000563130 COL4A1P02462 1669 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 RTL9Q8NET4 1388 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 CSF1RP07333 972 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 CTSWP56202 376 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 CCDC93Q567U6 631 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 CELF1Q92879 486 aaKnown RBP7.83□□□□□ -1.16
CNOT1-204ENST00000563130 ATP6V0A2Q9Y487 856 aa7.83□□□□□ -1.16
CNOT1-204ENST00000563130 CACNA1SQ13698 1873 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 C2orf72A6NCS6 295 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 PPEF1O14829 653 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 NBPF7P0C2Y1 421 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 TRIM27P14373 513 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 YY1P25490 414 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 CCDC152Q4G0S7 254 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 GRIPAP1Q4V328 841 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 SLC51AQ86UW1 340 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 SP8Q8IXZ3 490 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 KAZALD1Q96I82 304 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 USP44Q9H0E7 712 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 SEC31BQ9NQW1 1179 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 GPHNQ9NQX3 736 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 KIF3CO14782 793 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 SNPHO15079 494 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 IPO8O15397 1037 aaKnown RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 CCT4P50991 539 aaKnown RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 RPS8P62241 208 aaKnown RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 FOXO4P98177 505 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 RASSF7Q02833 373 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 INTS3Q68E01 1043 aaKnown RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 ATF7IPQ6VMQ6 1270 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 TMC4Q7Z404 712 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 RTKN2Q8IZC4 609 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 PSMD1Q99460 953 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 TAOK3Q9H2K8 898 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 C9orf78Q9NZ63 289 aaPredicted RBP7.82□□□□□ -1.16
CNOT1-204ENST00000563130 SBF1O95248 1867 aa7.82□□□□□ -1.16
CNOT1-204ENST00000563130 LMNB1P20700 586 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 TAF1P21675 1872 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 FKBP4Q02790 459 aaKnown RBP eCLIP7.81□□□□□ -1.16
CNOT1-204ENST00000563130 EPHA10Q5JZY3 1008 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 ERICH6Q7L0X2 663 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 CRISPLD2Q9H0B8 497 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 GREM2Q9H772 168 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 LRRC37AA6NMS7 1700 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 RABL6Q3YEC7 729 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-204ENST00000563130 C9orf131Q5VYM1 1079 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 ZKSCAN2Q63HK3 967 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 CCDC85AQ96PX6 553 aaPredicted RBP7.81□□□□□ -1.16
CNOT1-204ENST00000563130 TSHZ2Q9NRE2 1034 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 TNNQ9UQP3 1299 aa7.81□□□□□ -1.16
CNOT1-204ENST00000563130 MYH3P11055 1940 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms