RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 BCL2L13Q9BXK5 485 aa11.02□□□□□ -0.65
CKLF-208ENST00000563092 ZNF408Q9H9D4 720 aa11.02□□□□□ -0.65
CKLF-208ENST00000563092 RNF186Q9NXI6 227 aa11.02□□□□□ -0.65
CKLF-208ENST00000563092 ZNF609O15014 1411 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 SLC10A3P09131 477 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
CKLF-208ENST00000563092 KIF23Q02241 960 aaPredicted RBP11.01□□□□□ -0.65
CKLF-208ENST00000563092 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 PROSER3Q2NL68 480 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 SAMD7Q7Z3H4 446 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 CFAP44Q96MT7 982 aa11.01□□□□□ -0.65
CKLF-208ENST00000563092 GBA2Q9HCG7 927 aaPredicted RBP11.01□□□□□ -0.65
CKLF-208ENST00000563092 PSMD14O00487 310 aa11□□□□□ -0.65
CKLF-208ENST00000563092 HCLS1P14317 486 aaPredicted RBP11□□□□□ -0.65
CKLF-208ENST00000563092 CNGB1Q14028 1251 aaPredicted RBP11□□□□□ -0.65
CKLF-208ENST00000563092 PRPF38BQ5VTL8 546 aaKnown RBP11□□□□□ -0.65
CKLF-208ENST00000563092 DDX46Q7L014 1031 aaKnown RBP11□□□□□ -0.65
CKLF-208ENST00000563092 KRT26Q7Z3Y9 468 aa11□□□□□ -0.65
CKLF-208ENST00000563092 CSRNP1Q96S65 589 aa11□□□□□ -0.65
CKLF-208ENST00000563092 THUMPD2Q9BTF0 503 aaKnown RBP11□□□□□ -0.65
CKLF-208ENST00000563092 BABAM1Q9NWV8 329 aa11□□□□□ -0.65
CKLF-208ENST00000563092 RTL9Q8NET4 1388 aa11□□□□□ -0.65
CKLF-208ENST00000563092 COL4A1P02462 1669 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 ADM5C9JUS6 153 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 SOX10P56693 466 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 TCIRG1Q13488 830 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 HSP90AB3PQ58FF7 597 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 C2orf69Q8N8R5 385 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
CKLF-208ENST00000563092 SH3TC1Q8TE82 1336 aa10.99□□□□□ -0.65
CKLF-208ENST00000563092 TRPA1O75762 1119 aa10.98□□□□□ -0.65
CKLF-208ENST00000563092 ZNF157P51786 506 aaPredicted RBP10.98□□□□□ -0.65
CKLF-208ENST00000563092 SF3B3Q15393 1217 aaKnown RBP10.98□□□□□ -0.65
CKLF-208ENST00000563092 WASHC4Q2M389 1173 aa10.98□□□□□ -0.65
CKLF-208ENST00000563092 TBC1D10BQ4KMP7 808 aaPredicted RBP10.98□□□□□ -0.65
CKLF-208ENST00000563092 CTU1Q7Z7A3 348 aaKnown RBP10.98□□□□□ -0.65
CKLF-208ENST00000563092 POLLQ9UGP5 575 aa10.98□□□□□ -0.65
CKLF-208ENST00000563092 TRPC6Q9Y210 931 aa10.98□□□□□ -0.65
CKLF-208ENST00000563092 POTEMA6NI47 508 aa10.97□□□□□ -0.65
CKLF-208ENST00000563092 MAP3K13O43283 966 aa10.97□□□□□ -0.65
CKLF-208ENST00000563092 VIL1P09327 827 aaKnown RBP10.97□□□□□ -0.65
CKLF-208ENST00000563092 NOM1Q5C9Z4 860 aaKnown RBP10.97□□□□□ -0.65
CKLF-208ENST00000563092 COPS6Q7L5N1 327 aa10.97□□□□□ -0.65
CKLF-208ENST00000563092 RASAL3Q86YV0 1011 aa10.97□□□□□ -0.65
CKLF-208ENST00000563092 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
CKLF-208ENST00000563092 DCPSQ96C86 337 aaKnown RBP10.97□□□□□ -0.65
CKLF-208ENST00000563092 KCNQ5Q9NR82 932 aa10.97□□□□□ -0.65
CKLF-208ENST00000563092 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
CKLF-208ENST00000563092 DDX60Q8IY21 1712 aaKnown RBP10.97□□□□□ -0.65
CKLF-208ENST00000563092 TAF1P21675 1872 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 ANXA1P04083 346 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 ZNF280AP59817 542 aaPredicted RBP10.96□□□□□ -0.65
CKLF-208ENST00000563092 FKBP1BP68106 108 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 GPSM2P81274 684 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 PKN2Q16513 984 aaKnown RBP10.96□□□□□ -0.65
CKLF-208ENST00000563092 MAMSTRQ6ZN01 415 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 XAGE3Q8WTP9 111 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 CELF1Q92879 486 aaKnown RBP10.96□□□□□ -0.65
CKLF-208ENST00000563092 DBNDD1Q9H9R9 158 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 PODXL2Q9NZ53 605 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 TSPYL4Q9UJ04 414 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 HPS5Q9UPZ3 1129 aa10.96□□□□□ -0.65
CKLF-208ENST00000563092 ASTN2O75129 1339 aaPredicted RBP10.95□□□□□ -0.66
CKLF-208ENST00000563092 ECE2O60344 883 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 TIE1P35590 1138 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 KIF4BQ2VIQ3 1234 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 TBC1D16Q8TBP0 767 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 NECTIN2Q92692 538 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 CDCA5Q96FF9 252 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 ISCA1Q9BUE6 129 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 GGA3Q9NZ52 723 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
CKLF-208ENST00000563092 HTTP42858 3142 aa10.95□□□□□ -0.66
CKLF-208ENST00000563092 SCN9AQ15858 1988 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 NEFMP07197 916 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 EIF2S2P20042 333 aaKnown RBP10.94□□□□□ -0.66
CKLF-208ENST00000563092 TRIM28Q13263 835 aaKnown RBP10.94□□□□□ -0.66
CKLF-208ENST00000563092 SULF1Q8IWU6 871 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 PLCD3Q8N3E9 789 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 GMLQ99445 158 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 CFHR5Q9BXR6 569 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 PAPPA2Q9BXP8 1791 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 POLR2AP24928 1970 aaKnown RBP10.94□□□□□ -0.66
CKLF-208ENST00000563092 AKAP11Q9UKA4 1901 aa10.94□□□□□ -0.66
CKLF-208ENST00000563092 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 AGBL3Q8NEM8 1001 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 PLBD2Q8NHP8 589 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 EYA3Q99504 573 aa10.93□□□□□ -0.66
CKLF-208ENST00000563092 PNNQ9H307 717 aaKnown RBP10.93□□□□□ -0.66
CKLF-208ENST00000563092 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
CKLF-208ENST00000563092 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
CKLF-208ENST00000563092 CHL1O00533 1208 aa10.92□□□□□ -0.66
CKLF-208ENST00000563092 TM4SF4P48230 202 aa10.92□□□□□ -0.66
CKLF-208ENST00000563092 AIMP1Q12904 312 aaKnown RBP10.92□□□□□ -0.66
CKLF-208ENST00000563092 RBM26Q5T8P6 1007 aaKnown RBP10.92□□□□□ -0.66
CKLF-208ENST00000563092 ZNF296Q8WUU4 475 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms