RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ZSCAN23Q3MJ62 389 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 CD248Q9HCU0 757 aa10.83□□□□□ -0.68
CDH1-205ENST00000562836 KLHL40Q2TBA0 621 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 C4orf46Q504U0 113 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 MEX3CQ5U5Q3 659 aaKnown RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 SLF2Q8IX21 1173 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 NUP133Q8WUM0 1156 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 RBM33Q96EV2 1170 aaKnown RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 BRD8Q9H0E9 1235 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 A0A087WUV0 522 aaPredicted RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 HMGB1P1B2RPK0 211 aaPredicted RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 GOLGA6L19H0YKK7 550 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 HARSP12081 509 aaKnown RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 ATICP31939 592 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 PDE4BQ07343 736 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 CAVIN1Q6NZI2 390 aaKnown RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 NEK10Q6ZWH5 1172 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 PLPP6Q8IY26 295 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 SLC7A5P1Q8MH63 180 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 SPDL1Q96EA4 605 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 OSBPL10Q9BXB5 764 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 FHOD1Q9Y613 1164 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 SCG2P13521 617 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 MRPL12P52815 198 aaKnown RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 ATP2B2Q01814 1243 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 KCNB1Q14721 858 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 FBXW10Q5XX13 1052 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 LMBRD2Q68DH5 695 aaPredicted RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 MICALCLQ6ZW33 695 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
CDH1-205ENST00000562836 ANKRD24Q8TF21 1146 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 SPIRE2Q8WWL2 714 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 AASDHPPTQ9NRN7 309 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 EXOC1Q9NV70 894 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 HOXC10Q9NYD6 342 aa10.82□□□□□ -0.68
CDH1-205ENST00000562836 CFAP43Q8NDM7 1665 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 HMGXB3Q12766 1538 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 FHAD1B1AJZ9 1412 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 GIGYF1O75420 1035 aaPredicted RBP10.81□□□□□ -0.68
CDH1-205ENST00000562836 POSTNQ15063 836 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 Q4G0T1 1027 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 CLEC17AQ6ZS10 378 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 ARHGAP22Q7Z5H3 698 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 CORO1BQ9BR76 489 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 NLRP2Q9NX02 1062 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 CLIP2Q9UDT6 1046 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 SMTNL1A8MU46 457 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 ERLIN2O94905 339 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 COL19A1Q14993 1142 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 LLGL2Q6P1M3 1020 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 REXO1L1PQ8IX06 675 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 DCLK2Q8N568 766 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 SLC35B4Q969S0 331 aa10.81□□□□□ -0.68
CDH1-205ENST00000562836 LINC00854A0A1B0GVQ3 168 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 RPSAP08865 295 aaKnown RBP10.8□□□□□ -0.68
CDH1-205ENST00000562836 KRT72Q14CN4 511 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 RCN1Q15293 331 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 CDCA2Q69YH5 1023 aaPredicted RBP10.8□□□□□ -0.68
CDH1-205ENST00000562836 GALNT17Q6IS24 598 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 ERC1Q8IUD2 1116 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
CDH1-205ENST00000562836 CTNNBL1Q8WYA6 563 aaPredicted RBP10.8□□□□□ -0.68
CDH1-205ENST00000562836 PAGR1Q9BTK6 254 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 COMMD8Q9NX08 183 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 TMCC3Q9ULS5 477 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 NDUFB5O43674 189 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 HDAC4P56524 1084 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 NAA25Q14CX7 972 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 KIAA0753Q2KHM9 967 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 COBLL1Q53SF7 1204 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 JADE2Q9NQC1 790 aa10.8□□□□□ -0.68
CDH1-205ENST00000562836 LSM1O15116 133 aaKnown RBP10.79□□□□□ -0.68
CDH1-205ENST00000562836 SPTLC2O15270 562 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 MBD4O95243 580 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 TRIM21P19474 475 aaKnown RBP10.79□□□□□ -0.68
CDH1-205ENST00000562836 MATR3P43243 847 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH1-205ENST00000562836 KIF11P52732 1056 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 LRRC23Q53EV4 343 aaPredicted RBP10.79□□□□□ -0.68
CDH1-205ENST00000562836 NANOGNBQ7Z5D8 188 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 PEX5LQ8IYB4 626 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 CCDC112Q8NEF3 446 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 DDX12PQ92771 950 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 RSRC1Q96IZ7 334 aaKnown RBP10.79□□□□□ -0.68
CDH1-205ENST00000562836 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH1-205ENST00000562836 OPA1O60313 960 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 BBOX1O75936 387 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 PNMA6AP0CW24 399 aaPredicted RBP10.79□□□□□ -0.68
CDH1-205ENST00000562836 VPS53Q5VIR6 699 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 IQCA1Q86XH1 822 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 RUFY1Q96T51 708 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 ZCWPW1Q9H0M4 648 aa10.79□□□□□ -0.68
CDH1-205ENST00000562836 RPAP3Q9H6T3 665 aaPredicted RBP10.79□□□□□ -0.68
CDH1-205ENST00000562836 TRIM37O94972 964 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 TMED1Q13445 227 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 CCDC102AQ96A19 550 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDH1-205ENST00000562836 MIS18AQ9NYP9 233 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 FAN1Q9Y2M0 1017 aa10.78□□□□□ -0.68
CDH1-205ENST00000562836 TBC1D10BQ4KMP7 808 aaPredicted RBP10.78□□□□□ -0.68
CDH1-205ENST00000562836 C10orf62Q5T681 223 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms