RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 CYP46A1Q9Y6A2 500 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 HEG1Q9ULI3 1381 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 MST1RQ04912 1400 aa8.97□□□□□ -0.97
CFDP1-202ENST00000562602 RRP9O43818 475 aaKnown RBP8.96□□□□□ -0.98
CFDP1-202ENST00000562602 GIGYF1O75420 1035 aaPredicted RBP8.96□□□□□ -0.98
CFDP1-202ENST00000562602 OFD1O75665 1012 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 TPM3P06753 285 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 ZSCAN22P10073 491 aaPredicted RBP8.96□□□□□ -0.98
CFDP1-202ENST00000562602 UBE2HP62256 183 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 NEXNQ0ZGT2 675 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 CCDC183Q5T5S1 534 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 LARP1Q6PKG0 1096 aaKnown RBP8.96□□□□□ -0.98
CFDP1-202ENST00000562602 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 TMEM134Q9H6X4 195 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 IL1RAPL2Q9NP60 686 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 DDX21Q9NR30 783 aaKnown RBP eCLIP8.96□□□□□ -0.98
CFDP1-202ENST00000562602 SNRKQ9NRH2 765 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 CHPF2Q9P2E5 772 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 SMC3Q9UQE7 1217 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 SNX14Q9Y5W7 946 aa8.96□□□□□ -0.98
CFDP1-202ENST00000562602 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
CFDP1-202ENST00000562602 RCCD1A6NED2 376 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 GCP02774 474 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 COPS2P61201 443 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 PKP1Q13835 747 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 KRT32Q14532 448 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 ESCO1Q5FWF5 840 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 NUTM2GQ5VZR2 741 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 TTC14Q96N46 770 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 RBSNQ9H1K0 784 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 HMG20BQ9P0W2 317 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 PALD1Q9ULE6 856 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 RFX7Q2KHR2 1363 aa8.95□□□□□ -0.98
CFDP1-202ENST00000562602 LMO7Q8WWI1 1683 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 SETD1BQ9UPS6 1966 aaKnown RBP8.94□□□□□ -0.98
CFDP1-202ENST00000562602 GRM8O00222 908 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 STX6O43752 255 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 NBPF7P0C2Y1 421 aaPredicted RBP8.94□□□□□ -0.98
CFDP1-202ENST00000562602 DNAJB2P25686 324 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 RBM26Q5T8P6 1007 aaKnown RBP8.94□□□□□ -0.98
CFDP1-202ENST00000562602 RBM46Q8TBY0 533 aaKnown RBP8.94□□□□□ -0.98
CFDP1-202ENST00000562602 MAP7D2Q96T17 732 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 LGR6Q9HBX8 967 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 TMEM63CQ9P1W3 806 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 ADCY9O60503 1353 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 COL15A1P39059 1388 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 SLIT3O75094 1523 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 ABCC6O95255 1503 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 KDM3BQ7LBC6 1761 aa8.94□□□□□ -0.98
CFDP1-202ENST00000562602 SYCE3A1L190 88 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 LCE2BO14633 110 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 TSGA10IPQ3SY00 556 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 TSHZ3Q63HK5 1081 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 MTERF4Q7Z6M4 381 aaKnown RBP8.93□□□□□ -0.98
CFDP1-202ENST00000562602 USP48Q86UV5 1035 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 UNC5CLQ8IV45 518 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 ANKRD24Q8TF21 1146 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 UPF3BQ9BZI7 483 aaKnown RBP8.93□□□□□ -0.98
CFDP1-202ENST00000562602 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.93□□□□□ -0.98
CFDP1-202ENST00000562602 SPG7Q9UQ90 795 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 ZKSCAN5Q9Y2L8 839 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 CCDC171Q6TFL3 1326 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 MARF1Q9Y4F3 1742 aaKnown RBP8.93□□□□□ -0.98
CFDP1-202ENST00000562602 TUBGCP6Q96RT7 1819 aa8.93□□□□□ -0.98
CFDP1-202ENST00000562602 CHD2O14647 1828 aaKnown RBP8.92□□□□□ -0.98
CFDP1-202ENST00000562602 ZPR1O75312 459 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 F13A1P00488 732 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 SLC10A3P09131 477 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 FECHP22830 423 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 KCNJ4P48050 445 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 AK2P54819 239 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 CWC27Q6UX04 472 aaKnown RBP8.92□□□□□ -0.98
CFDP1-202ENST00000562602 RUFY3Q7L099 469 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 USHBP1Q8N6Y0 703 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 RAPGEF4Q8WZA2 1011 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 PRKD2Q9BZL6 878 aa8.92□□□□□ -0.98
CFDP1-202ENST00000562602 RGPD8O14715 1765 aaPredicted RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 RPAP1Q9BWH6 1393 aaPredicted RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 GPR37O15354 613 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 CAVIN2O95810 425 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 TATP17735 454 aaPredicted RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 CASTP20810 708 aaKnown RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 SYT1P21579 422 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 KIAA2012Q0VF49 1180 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 NECTIN1Q15223 517 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 MPRIPQ6WCQ1 1025 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 RIC3Q7Z5B4 369 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 AACSQ86V21 672 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 VSIG10Q8N0Z9 540 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 PXYLP1Q8TE99 480 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 MAP4K1Q92918 833 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 JAKMIP1Q96N16 626 aaKnown RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 SCAND2PQ9GZW5 306 aaPredicted RBP8.91□□□□□ -0.98
CFDP1-202ENST00000562602 KIF3AQ9Y496 699 aa8.91□□□□□ -0.98
CFDP1-202ENST00000562602 CRYBG1Q9Y4K1 1723 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms