RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TLR7Q9NYK1 1049 aaKnown RBP17.43■□□□□ 0.38
COMMD4-205ENST00000562310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-205ENST00000562310 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
COMMD4-205ENST00000562310 ATP5JP18859 108 aa17.42■□□□□ 0.38
COMMD4-205ENST00000562310 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
COMMD4-205ENST00000562310 A0A1B0GUL7 405 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 MSH5O43196 834 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 SERPINB2P05120 415 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 SLC15A2Q16348 729 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
COMMD4-205ENST00000562310 POLRMTO00411 1230 aaKnown RBP17.4■□□□□ 0.38
COMMD4-205ENST00000562310 ANP32AP39687 249 aaKnown RBP17.4■□□□□ 0.38
COMMD4-205ENST00000562310 C3orf67Q6ZVT6 689 aa17.4■□□□□ 0.38
COMMD4-205ENST00000562310 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
COMMD4-205ENST00000562310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.4■□□□□ 0.38
COMMD4-205ENST00000562310 RILPL2Q969X0 211 aa17.4■□□□□ 0.38
COMMD4-205ENST00000562310 EVI5LQ96CN4 794 aa17.4■□□□□ 0.38
COMMD4-205ENST00000562310 NEUROD6Q96NK8 337 aa17.4■□□□□ 0.38
COMMD4-205ENST00000562310 RFX7Q2KHR2 1363 aa17.4■□□□□ 0.38
COMMD4-205ENST00000562310 PDE8BO95263 885 aa17.39■□□□□ 0.37
COMMD4-205ENST00000562310 DDR1Q08345 913 aa17.39■□□□□ 0.37
COMMD4-205ENST00000562310 PUM3Q15397 648 aaKnown RBP17.39■□□□□ 0.37
COMMD4-205ENST00000562310 DDX46Q7L014 1031 aaKnown RBP17.39■□□□□ 0.37
COMMD4-205ENST00000562310 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
COMMD4-205ENST00000562310 ANKRD31Q8N7Z5 1873 aa17.39■□□□□ 0.37
COMMD4-205ENST00000562310 TAF1P21675 1872 aa17.38■□□□□ 0.37
COMMD4-205ENST00000562310 SEC24BO95487 1268 aa17.38■□□□□ 0.37
COMMD4-205ENST00000562310 MFAP1P55081 439 aaKnown RBP17.38■□□□□ 0.37
COMMD4-205ENST00000562310 TICAM2Q86XR7 235 aa17.38■□□□□ 0.37
COMMD4-205ENST00000562310 BSDC1Q9NW68 430 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-205ENST00000562310 COL4A1P02462 1669 aa17.38■□□□□ 0.37
COMMD4-205ENST00000562310 HIP1O00291 1037 aa17.37■□□□□ 0.37
COMMD4-205ENST00000562310 SLC5A1P13866 664 aa17.37■□□□□ 0.37
COMMD4-205ENST00000562310 CCDC158Q5M9N0 1113 aa17.37■□□□□ 0.37
COMMD4-205ENST00000562310 GORABQ5T7V8 394 aa17.37■□□□□ 0.37
COMMD4-205ENST00000562310 LPIN2Q92539 896 aa17.37■□□□□ 0.37
COMMD4-205ENST00000562310 HAUS7Q99871 368 aa17.37■□□□□ 0.37
COMMD4-205ENST00000562310 REC8O95072 547 aa17.36■□□□□ 0.37
COMMD4-205ENST00000562310 CHMLP26374 656 aa17.36■□□□□ 0.37
COMMD4-205ENST00000562310 TIMM10P62072 90 aa17.36■□□□□ 0.37
COMMD4-205ENST00000562310 CRY2Q49AN0 593 aa17.36■□□□□ 0.37
COMMD4-205ENST00000562310 XAGE2Q96GT9 111 aa17.36■□□□□ 0.37
COMMD4-205ENST00000562310 TBC1D32Q96NH3 1257 aa17.36■□□□□ 0.37
COMMD4-205ENST00000562310 FGFR2P21802 821 aa17.35■□□□□ 0.37
COMMD4-205ENST00000562310 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
COMMD4-205ENST00000562310 TTC39AQ5SRH9 613 aa17.35■□□□□ 0.37
COMMD4-205ENST00000562310 RPGRQ92834 1020 aaKnown RBP17.35■□□□□ 0.37
COMMD4-205ENST00000562310 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-205ENST00000562310 BOLA2Q9H3K6 86 aa17.35■□□□□ 0.37
COMMD4-205ENST00000562310 PARP3Q9Y6F1 533 aa17.35■□□□□ 0.37
COMMD4-205ENST00000562310 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
COMMD4-205ENST00000562310 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
COMMD4-205ENST00000562310 CHRNDQ07001 517 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 GRAPQ13588 217 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 DEFB132Q7Z7B7 95 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 GRAPLQ8TC17 118 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-205ENST00000562310 RUFY2Q8WXA3 655 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 ESYT1Q9BSJ8 1104 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 DIAPH3Q9NSV4 1193 aa17.34■□□□□ 0.37
COMMD4-205ENST00000562310 MYH7P12883 1935 aa17.33■□□□□ 0.37
COMMD4-205ENST00000562310 KLRG2A4D1S0 409 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-205ENST00000562310 MAP4K4O95819 1239 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-205ENST00000562310 MMP10P09238 476 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 UQCRFS1P1P0C7P4 283 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 ADORA1P30542 326 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
COMMD4-205ENST00000562310 RBM17Q96I25 401 aaKnown RBP17.33■□□□□ 0.36
COMMD4-205ENST00000562310 BRIP1Q9BX63 1249 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 C22orf23Q9BZE7 217 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 AKAP11Q9UKA4 1901 aa17.33■□□□□ 0.36
COMMD4-205ENST00000562310 RAD50Q92878 1312 aa17.32■□□□□ 0.36
COMMD4-205ENST00000562310 EPB41L2O43491 1005 aaKnown RBP17.32■□□□□ 0.36
COMMD4-205ENST00000562310 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-205ENST00000562310 UBE4AQ14139 1066 aa17.32■□□□□ 0.36
COMMD4-205ENST00000562310 FSD1Q9BTV5 496 aa17.32■□□□□ 0.36
COMMD4-205ENST00000562310 COL11A2P13942 1736 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-205ENST00000562310 RBM25P49756 843 aaKnown RBP17.31■□□□□ 0.36
COMMD4-205ENST00000562310 LRRFIP1Q32MZ4 808 aaKnown RBP17.31■□□□□ 0.36
COMMD4-205ENST00000562310 TMC4Q7Z404 712 aa17.31■□□□□ 0.36
COMMD4-205ENST00000562310 HELBQ8NG08 1087 aaPredicted RBP17.31■□□□□ 0.36
COMMD4-205ENST00000562310 SLC16A10Q8TF71 515 aa17.31■□□□□ 0.36
COMMD4-205ENST00000562310 DDRGK1Q96HY6 314 aa17.31■□□□□ 0.36
COMMD4-205ENST00000562310 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
COMMD4-205ENST00000562310 DNAJC2Q99543 621 aaKnown RBP17.31■□□□□ 0.36
COMMD4-205ENST00000562310 PAG1Q9NWQ8 432 aa17.31■□□□□ 0.36
COMMD4-205ENST00000562310 MINPP1Q9UNW1 487 aa17.31■□□□□ 0.36
COMMD4-205ENST00000562310 ARID4AP29374 1257 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-205ENST00000562310 PDE6BP35913 854 aa17.3■□□□□ 0.36
COMMD4-205ENST00000562310 KBTBD3Q8NAB2 608 aa17.3■□□□□ 0.36
COMMD4-205ENST00000562310 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
COMMD4-205ENST00000562310 TAF5LO75529 589 aa17.29■□□□□ 0.36
COMMD4-205ENST00000562310 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
COMMD4-205ENST00000562310 DOCK2Q92608 1830 aa17.28■□□□□ 0.36
COMMD4-205ENST00000562310 SGSM2O43147 1006 aa17.28■□□□□ 0.36
COMMD4-205ENST00000562310 BBOX1O75936 387 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms