RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 SPDYE3A6NKU9 549 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
RPAP1-204ENST00000562303 CGNQ9P2M7 1197 aaKnown RBP12.82□□□□□ -0.36
RPAP1-204ENST00000562303 ARHGEF11O15085 1522 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 DDB1Q16531 1140 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 CKAP4Q07065 602 aaKnown RBP12.82□□□□□ -0.36
RPAP1-204ENST00000562303 SNW1Q13573 536 aaKnown RBP12.82□□□□□ -0.36
RPAP1-204ENST00000562303 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.82□□□□□ -0.36
RPAP1-204ENST00000562303 ZNF165P49910 485 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 ASIC1P78348 528 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 ZSCAN16Q9H4T2 348 aaPredicted RBP12.82□□□□□ -0.36
RPAP1-204ENST00000562303 CHPF2Q9P2E5 772 aa12.82□□□□□ -0.36
RPAP1-204ENST00000562303 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
RPAP1-204ENST00000562303 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
RPAP1-204ENST00000562303 LMOD1P29536 600 aaPredicted RBP12.81□□□□□ -0.36
RPAP1-204ENST00000562303 TBC1D9Q6ZT07 1266 aa12.81□□□□□ -0.36
RPAP1-204ENST00000562303 COPS6Q7L5N1 327 aa12.81□□□□□ -0.36
RPAP1-204ENST00000562303 RHPN1Q8TCX5 695 aa12.81□□□□□ -0.36
RPAP1-204ENST00000562303 TNPO1Q92973 898 aaKnown RBP12.81□□□□□ -0.36
RPAP1-204ENST00000562303 LRRC2Q9BYS8 371 aa12.81□□□□□ -0.36
RPAP1-204ENST00000562303 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 RIMBP2O15034 1052 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 FAM13AO94988 1023 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 GNG11P61952 73 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 ZSWIM4Q9H7M6 989 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 SLC9C2Q5TAH2 1124 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 PAIP2Q9BPZ3 127 aaKnown RBP12.8□□□□□ -0.36
RPAP1-204ENST00000562303 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
RPAP1-204ENST00000562303 CYLC1P35663 651 aaPredicted RBP12.8□□□□□ -0.36
RPAP1-204ENST00000562303 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
RPAP1-204ENST00000562303 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 HSF2BPO75031 334 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 KIF4AO95239 1232 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 CTAGE1Q96RT6 745 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 RASAL2Q9UJF2 1139 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 ADCY5O95622 1261 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 NECAB1Q8N987 351 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 SELENOOQ9BVL4 669 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 FAM107BQ9H098 131 aa12.8□□□□□ -0.36
RPAP1-204ENST00000562303 RTCBQ9Y3I0 505 aaKnown RBP12.8□□□□□ -0.36
RPAP1-204ENST00000562303 CBX1P83916 185 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 AKNAD1Q5T1N1 836 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 TTC22Q5TAA0 569 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 LMBR1LQ6UX01 489 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 CCDC117Q8IWD4 279 aaPredicted RBP12.79□□□□□ -0.36
RPAP1-204ENST00000562303 PRPHP41219 470 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 DZIP3Q86Y13 1208 aaKnown RBP12.79□□□□□ -0.36
RPAP1-204ENST00000562303 NSFL1CQ9UNZ2 370 aaKnown RBP12.79□□□□□ -0.36
RPAP1-204ENST00000562303 MXRA7P84157 204 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 PSMA7O14818 248 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 TNNI2P48788 182 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 UBASH3AP57075 661 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 FBF1Q8TES7 1133 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 SIRT1Q96EB6 747 aa12.79□□□□□ -0.36
RPAP1-204ENST00000562303 CDK13Q14004 1512 aaKnown RBP12.79□□□□□ -0.36
RPAP1-204ENST00000562303 UBE2HP62256 183 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 SP4Q02446 784 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 CCDC63Q8NA47 563 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 PLCG2P16885 1265 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
RPAP1-204ENST00000562303 MCMDC2Q4G0Z9 681 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 EYA3Q99504 573 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 SBNO2Q9Y2G9 1366 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 PLCB3Q01970 1234 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 KRT79Q5XKE5 535 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 CCDC50Q8IVM0 306 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 MCM9Q9NXL9 1143 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 NPHP3Q7Z494 1330 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 SPATA24Q86W54 205 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 PODXL2Q9NZ53 605 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 BACH1O14867 736 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
RPAP1-204ENST00000562303 KCNG4Q8TDN1 519 aa12.78□□□□□ -0.36
RPAP1-204ENST00000562303 ARID5AQ03989 594 aa12.77□□□□□ -0.36
RPAP1-204ENST00000562303 CCDC77Q9BR77 488 aa12.77□□□□□ -0.36
RPAP1-204ENST00000562303 NSD2O96028 1365 aa12.77□□□□□ -0.36
RPAP1-204ENST00000562303 SKAP1Q86WV1 359 aa12.77□□□□□ -0.36
RPAP1-204ENST00000562303 MSANTD4Q8NCY6 345 aa12.77□□□□□ -0.36
RPAP1-204ENST00000562303 MAGI1Q96QZ7 1491 aaPredicted RBP12.77□□□□□ -0.36
RPAP1-204ENST00000562303 NOS1P29475 1434 aa12.77□□□□□ -0.37
RPAP1-204ENST00000562303 SPAG1Q07617 926 aa12.77□□□□□ -0.37
RPAP1-204ENST00000562303 TBC1D2Q9BYX2 928 aa12.77□□□□□ -0.37
RPAP1-204ENST00000562303 ATP2A1O14983 1001 aa12.77□□□□□ -0.37
RPAP1-204ENST00000562303 TERF1P54274 439 aa12.77□□□□□ -0.37
RPAP1-204ENST00000562303 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
RPAP1-204ENST00000562303 BMP2KLQ5H9B9 411 aa12.77□□□□□ -0.37
RPAP1-204ENST00000562303 RTL9Q8NET4 1388 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 Q6ZUG5 572 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 TCEANC2Q96MN5 208 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 GRM8O00222 908 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 CAVIN2O95810 425 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 PTGS1P23219 599 aa12.76□□□□□ -0.37
RPAP1-204ENST00000562303 MARCKSP29966 332 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms