RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 LILRB5O75023 590 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 RGS9O75916 674 aaPredicted RBP6.38□□□□□ -1.39
HERC1-215ENST00000561436 PSAPP07602 524 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 AFF1P51825 1210 aaKnown RBP6.38□□□□□ -1.39
HERC1-215ENST00000561436 ATP11AP98196 1134 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 FKBP4Q02790 459 aaKnown RBP eCLIP6.38□□□□□ -1.39
HERC1-215ENST00000561436 ECM1Q16610 540 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 ELMSAN1Q6PJG2 1045 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
HERC1-215ENST00000561436 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 ELP3Q9H9T3 547 aa6.38□□□□□ -1.39
HERC1-215ENST00000561436 LOC102724428A0A0B4J2F2 783 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 TRPA1O75762 1119 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 CHRNA4P43681 627 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 SIK1P57059 783 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 GRIK5Q16478 980 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 TRAPPC3LQ5T215 181 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 GDF6Q6KF10 455 aaPredicted RBP6.37□□□□□ -1.39
HERC1-215ENST00000561436 TXNDC2Q86VQ3 553 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 DMRTC2Q8IXT2 367 aaPredicted RBP6.37□□□□□ -1.39
HERC1-215ENST00000561436 C1orf127Q8N9H9 656 aa6.37□□□□□ -1.39
HERC1-215ENST00000561436 FOXD3Q9UJU5 478 aaPredicted RBP6.37□□□□□ -1.39
HERC1-215ENST00000561436 ICMTO60725 284 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 NRLP54845 237 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 MFAP1P55081 439 aaKnown RBP6.36□□□□□ -1.39
HERC1-215ENST00000561436 GRIK4Q16099 956 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 CCDC27Q2M243 656 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 TTC39BQ5VTQ0 682 aaPredicted RBP6.36□□□□□ -1.39
HERC1-215ENST00000561436 GLYCTKQ8IVS8 523 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 OR13H1Q8NG92 308 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 PLD4Q96BZ4 506 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 ABI2Q9NYB9 513 aaPredicted RBP6.36□□□□□ -1.39
HERC1-215ENST00000561436 FAM13BQ9NYF5 915 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 TRIM33Q9UPN9 1127 aa6.36□□□□□ -1.39
HERC1-215ENST00000561436 NPR3P17342 541 aa6.35□□□□□ -1.39
HERC1-215ENST00000561436 MZF1P28698 734 aaPredicted RBP6.35□□□□□ -1.39
HERC1-215ENST00000561436 CDC25BP30305 580 aa6.35□□□□□ -1.39
HERC1-215ENST00000561436 SHISA2Q6UWI4 295 aa6.35□□□□□ -1.39
HERC1-215ENST00000561436 HHIPQ96QV1 700 aa6.35□□□□□ -1.39
HERC1-215ENST00000561436 EFCC1Q9HA90 598 aa6.35□□□□□ -1.39
HERC1-215ENST00000561436 EGFL7Q9UHF1 273 aa6.35□□□□□ -1.39
HERC1-215ENST00000561436 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
HERC1-215ENST00000561436 C1QTNF9BB2RNN3 333 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 FAM13AO94988 1023 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 GHRHP01286 108 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 POLR3DP05423 398 aaPredicted RBP6.34□□□□□ -1.39
HERC1-215ENST00000561436 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 SF3B2Q13435 895 aaKnown RBP6.34□□□□□ -1.39
HERC1-215ENST00000561436 TXNDC11Q6PKC3 985 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 CD163Q86VB7 1156 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 LACRTQ9GZZ8 138 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 RASSF4Q9H2L5 321 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 CHRDQ9H2X0 955 aa6.34□□□□□ -1.39
HERC1-215ENST00000561436 A0A0A0MRY4 1105 aa6.33□□□□□ -1.4
HERC1-215ENST00000561436 NCAPG2Q86XI2 1143 aa6.33□□□□□ -1.4
HERC1-215ENST00000561436 C11orf16Q9NQ32 467 aa6.33□□□□□ -1.4
HERC1-215ENST00000561436 PRDM6Q9NQX0 595 aa6.33□□□□□ -1.4
HERC1-215ENST00000561436 NOP53Q9NZM5 478 aaKnown RBP6.33□□□□□ -1.4
HERC1-215ENST00000561436 BIN2Q9UBW5 565 aaPredicted RBP6.33□□□□□ -1.4
HERC1-215ENST00000561436 SOWAHDA6NJG2 315 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 EREGO14944 169 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 SOX18P35713 384 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 BAG6P46379 1132 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 HYAL2Q12891 473 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 CEP135Q66GS9 1140 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 PDE12Q6L8Q7 609 aaKnown RBP6.32□□□□□ -1.4
HERC1-215ENST00000561436 ALKBH2Q6NS38 261 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 TTC16Q8NEE8 873 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 SPOCK3Q9BQ16 436 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 LATS2Q9NRM7 1088 aa6.32□□□□□ -1.4
HERC1-215ENST00000561436 TNFRSF21O75509 655 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 PROCP04070 461 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 PCSK2P16519 638 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 CES1P23141 567 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 RANGAP1P46060 587 aaPredicted RBP6.31□□□□□ -1.4
HERC1-215ENST00000561436 TRIM28Q13263 835 aaKnown RBP6.31□□□□□ -1.4
HERC1-215ENST00000561436 PCSK7Q16549 785 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 USPL1Q5W0Q7 1092 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 MSL1Q68DK7 614 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 WFDC8Q8IUA0 241 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 GJD3Q8N144 294 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 IL22RA1Q8N6P7 574 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 SH2B1Q9NRF2 756 aaPredicted RBP6.31□□□□□ -1.4
HERC1-215ENST00000561436 FRRS1LQ9P0K9 344 aa6.31□□□□□ -1.4
HERC1-215ENST00000561436 PIK3R2O00459 728 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 PHACTR2O75167 634 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 DEAF1O75398 565 aaPredicted RBP6.3□□□□□ -1.4
HERC1-215ENST00000561436 SPATA31C1P0DKV0 1188 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 HOXD8P13378 290 aaPredicted RBP6.3□□□□□ -1.4
HERC1-215ENST00000561436 ORC1Q13415 861 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 PRRT3Q5FWE3 981 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 CEP120Q8N960 986 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 BRPF3Q9ULD4 1205 aa6.3□□□□□ -1.4
HERC1-215ENST00000561436 SELPP16109 830 aa6.29□□□□□ -1.4
HERC1-215ENST00000561436 ERCC3P19447 782 aa6.29□□□□□ -1.4
HERC1-215ENST00000561436 FMR1NBQ8N0W7 255 aaPredicted RBP6.29□□□□□ -1.4
HERC1-215ENST00000561436 SPACA7Q96KW9 195 aa6.29□□□□□ -1.4
HERC1-215ENST00000561436 CARD10Q9BWT7 1032 aa6.29□□□□□ -1.4
HERC1-215ENST00000561436 RBSNQ9H1K0 784 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms